RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 SLC19A1P41440 591 aa10.56□□□□□ -0.72
PBRM1-220ENST00000480064 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-220ENST00000480064 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
PBRM1-220ENST00000480064 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
PBRM1-220ENST00000480064 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
PBRM1-220ENST00000480064 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
PBRM1-220ENST00000480064 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-220ENST00000480064 EMID1Q96A84 441 aaPredicted RBP10.53□□□□□ -0.72
PBRM1-220ENST00000480064 SLC6A16Q9GZN6 736 aa10.53□□□□□ -0.72
PBRM1-220ENST00000480064 LCE2BO14633 110 aa10.52□□□□□ -0.73
PBRM1-220ENST00000480064 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
PBRM1-220ENST00000480064 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
PBRM1-220ENST00000480064 PROSER2Q86WR7 435 aaPredicted RBP10.51□□□□□ -0.73
PBRM1-220ENST00000480064 RAD21O60216 631 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 GCGRP47871 477 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 FUT2Q10981 343 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 MCM6Q14566 821 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 MORN1Q5T089 497 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 SPSB2Q99619 263 aa10.5□□□□□ -0.73
PBRM1-220ENST00000480064 LIAT1Q6ZQX7 453 aa10.49□□□□□ -0.73
PBRM1-220ENST00000480064 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-220ENST00000480064 GIGYF2Q6Y7W6 1299 aaKnown RBP10.48□□□□□ -0.73
PBRM1-220ENST00000480064 ZNF598Q86UK7 904 aaKnown RBP10.48□□□□□ -0.73
PBRM1-220ENST00000480064 SERPINA10Q9UK55 444 aa10.48□□□□□ -0.73
PBRM1-220ENST00000480064 TRIM67Q6ZTA4 783 aa10.46□□□□□ -0.73
PBRM1-220ENST00000480064 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
PBRM1-220ENST00000480064 PLA2G2CQ5R387 149 aa10.45□□□□□ -0.74
PBRM1-220ENST00000480064 THAP11Q96EK4 314 aa10.45□□□□□ -0.74
PBRM1-220ENST00000480064 TRAIPQ9BWF2 469 aa10.45□□□□□ -0.74
PBRM1-220ENST00000480064 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
PBRM1-220ENST00000480064 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
PBRM1-220ENST00000480064 ZNF697Q5TEC3 545 aa10.44□□□□□ -0.74
PBRM1-220ENST00000480064 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
PBRM1-220ENST00000480064 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
PBRM1-220ENST00000480064 MS4A1P11836 297 aa10.42□□□□□ -0.74
PBRM1-220ENST00000480064 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
PBRM1-220ENST00000480064 SALL2Q9Y467 1007 aaPredicted RBP10.42□□□□□ -0.74
PBRM1-220ENST00000480064 CD46P15529 392 aa10.41□□□□□ -0.74
PBRM1-220ENST00000480064 PRR20EP86478 221 aa10.41□□□□□ -0.74
PBRM1-220ENST00000480064 PRR20CP86479 221 aa10.41□□□□□ -0.74
PBRM1-220ENST00000480064 PRR20DP86480 221 aa10.41□□□□□ -0.74
PBRM1-220ENST00000480064 PRR20BP86481 221 aa10.41□□□□□ -0.74
PBRM1-220ENST00000480064 PRR20AP86496 221 aa10.41□□□□□ -0.74
PBRM1-220ENST00000480064 FAM160A2Q8N612 972 aaPredicted RBP10.41□□□□□ -0.74
PBRM1-220ENST00000480064 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
PBRM1-220ENST00000480064 GDF9O60383 454 aa10.39□□□□□ -0.75
PBRM1-220ENST00000480064 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-220ENST00000480064 CLCN1P35523 988 aa10.38□□□□□ -0.75
PBRM1-220ENST00000480064 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
PBRM1-220ENST00000480064 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
PBRM1-220ENST00000480064 PKDCCQ504Y2 493 aa10.37□□□□□ -0.75
PBRM1-220ENST00000480064 RNF19BQ6ZMZ0 732 aa10.37□□□□□ -0.75
PBRM1-220ENST00000480064 DGAT1O75907 488 aa10.36□□□□□ -0.75
PBRM1-220ENST00000480064 RPIAP49247 311 aa10.36□□□□□ -0.75
PBRM1-220ENST00000480064 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
PBRM1-220ENST00000480064 PRDM9Q9NQV7 894 aa10.36□□□□□ -0.75
PBRM1-220ENST00000480064 KDM4AO75164 1064 aa10.35□□□□□ -0.75
PBRM1-220ENST00000480064 SKIV2LQ15477 1246 aaKnown RBP10.35□□□□□ -0.75
PBRM1-220ENST00000480064 MSS51Q4VC12 460 aa10.35□□□□□ -0.75
PBRM1-220ENST00000480064 Q3C1V9 767 aa10.34□□□□□ -0.75
PBRM1-220ENST00000480064 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
PBRM1-220ENST00000480064 CD2BP2O95400 341 aaKnown RBP10.33□□□□□ -0.76
PBRM1-220ENST00000480064 FOXC1Q12948 553 aa10.33□□□□□ -0.76
PBRM1-220ENST00000480064 ZNF787Q6DD87 383 aa10.33□□□□□ -0.76
PBRM1-220ENST00000480064 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
PBRM1-220ENST00000480064 FAM187AA6NFU0 413 aa10.32□□□□□ -0.76
PBRM1-220ENST00000480064 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
PBRM1-220ENST00000480064 USP46P62068 366 aa10.32□□□□□ -0.76
PBRM1-220ENST00000480064 MYT1Q01538 1121 aa10.32□□□□□ -0.76
PBRM1-220ENST00000480064 WWC1Q8IX03 1113 aa10.32□□□□□ -0.76
PBRM1-220ENST00000480064 PKD2L1Q9P0L9 805 aa10.32□□□□□ -0.76
PBRM1-220ENST00000480064 FNBP4Q8N3X1 1017 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-220ENST00000480064 RETREG2Q8NC44 543 aa10.31□□□□□ -0.76
PBRM1-220ENST00000480064 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
PBRM1-220ENST00000480064 ZBTB24O43167 697 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-220ENST00000480064 PDE4CQ08493 712 aa10.29□□□□□ -0.76
PBRM1-220ENST00000480064 HLA-CQ95604 372 aa10.29□□□□□ -0.76
PBRM1-220ENST00000480064 USB1Q9BQ65 265 aaKnown RBP10.29□□□□□ -0.76
PBRM1-220ENST00000480064 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-220ENST00000480064 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-220ENST00000480064 MMP16P51512 607 aa10.28□□□□□ -0.76
PBRM1-220ENST00000480064 HOXA2O43364 376 aa10.27□□□□□ -0.77
PBRM1-220ENST00000480064 SSTR3P32745 418 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-220ENST00000480064 BEGAINQ9BUH8 593 aa10.27□□□□□ -0.77
PBRM1-220ENST00000480064 COG6Q9Y2V7 657 aa10.27□□□□□ -0.77
PBRM1-220ENST00000480064 PATL2C9JE40 543 aaKnown RBP10.25□□□□□ -0.77
PBRM1-220ENST00000480064 GZF1Q9H116 711 aaPredicted RBP10.25□□□□□ -0.77
PBRM1-220ENST00000480064 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
PBRM1-220ENST00000480064 DXOO77932 396 aaKnown RBP10.24□□□□□ -0.77
PBRM1-220ENST00000480064 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
PBRM1-220ENST00000480064 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
PBRM1-220ENST00000480064 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
PBRM1-220ENST00000480064 TOR4AQ9NXH8 423 aa10.24□□□□□ -0.77
PBRM1-220ENST00000480064 PPP1R15AO75807 674 aaPredicted RBP10.23□□□□□ -0.77
PBRM1-220ENST00000480064 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
PBRM1-220ENST00000480064 CYP4X1Q8N118 509 aa10.23□□□□□ -0.77
PBRM1-220ENST00000480064 PROCA1Q8NCQ7 364 aaPredicted RBP10.23□□□□□ -0.77
PBRM1-220ENST00000480064 BANK1Q8NDB2 785 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms