RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
LMNA-214ENST00000478063 ROBO2Q9HCK4 1378 aa18.54■□□□□ 0.56
LMNA-214ENST00000478063 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
LMNA-214ENST00000478063 SIRT1Q96EB6 747 aa18.52■□□□□ 0.56
LMNA-214ENST00000478063 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
LMNA-214ENST00000478063 DDX10Q13206 875 aaKnown RBP18.51■□□□□ 0.55
LMNA-214ENST00000478063 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
LMNA-214ENST00000478063 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
LMNA-214ENST00000478063 CDCA8Q53HL2 280 aa18.5■□□□□ 0.55
LMNA-214ENST00000478063 KCNA6P17658 529 aa18.49■□□□□ 0.55
LMNA-214ENST00000478063 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
LMNA-214ENST00000478063 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
LMNA-214ENST00000478063 NKTRP30414 1462 aaKnown RBP18.47■□□□□ 0.55
LMNA-214ENST00000478063 RGPD8O14715 1765 aaPredicted RBP18.45■□□□□ 0.54
LMNA-214ENST00000478063 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
LMNA-214ENST00000478063 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
LMNA-214ENST00000478063 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
LMNA-214ENST00000478063 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
LMNA-214ENST00000478063 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
LMNA-214ENST00000478063 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
LMNA-214ENST00000478063 CDK19Q9BWU1 502 aa18.41■□□□□ 0.54
LMNA-214ENST00000478063 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
LMNA-214ENST00000478063 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
LMNA-214ENST00000478063 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
LMNA-214ENST00000478063 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
LMNA-214ENST00000478063 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
LMNA-214ENST00000478063 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
LMNA-214ENST00000478063 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
LMNA-214ENST00000478063 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
LMNA-214ENST00000478063 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
LMNA-214ENST00000478063 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
LMNA-214ENST00000478063 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
LMNA-214ENST00000478063 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
LMNA-214ENST00000478063 ATP7BP35670 1465 aa18.36■□□□□ 0.53
LMNA-214ENST00000478063 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
LMNA-214ENST00000478063 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
LMNA-214ENST00000478063 NINLQ9Y2I6 1382 aa18.34■□□□□ 0.53
LMNA-214ENST00000478063 PANK3Q9H999 370 aa18.33■□□□□ 0.52
LMNA-214ENST00000478063 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
LMNA-214ENST00000478063 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
LMNA-214ENST00000478063 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
LMNA-214ENST00000478063 LRRC7Q96NW7 1537 aa18.32■□□□□ 0.52
LMNA-214ENST00000478063 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
LMNA-214ENST00000478063 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
LMNA-214ENST00000478063 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
LMNA-214ENST00000478063 NCOA3Q9Y6Q9 1424 aa18.31■□□□□ 0.52
LMNA-214ENST00000478063 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
LMNA-214ENST00000478063 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
LMNA-214ENST00000478063 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
LMNA-214ENST00000478063 ANKRD36BQ8N2N9 1353 aa18.29■□□□□ 0.52
LMNA-214ENST00000478063 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
LMNA-214ENST00000478063 ANP32CO43423 234 aa18.27■□□□□ 0.52
LMNA-214ENST00000478063 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
LMNA-214ENST00000478063 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
LMNA-214ENST00000478063 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
LMNA-214ENST00000478063 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
LMNA-214ENST00000478063 DCCP43146 1447 aa18.26■□□□□ 0.51
LMNA-214ENST00000478063 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
LMNA-214ENST00000478063 C19orf44Q9H6X5 657 aa18.26■□□□□ 0.51
LMNA-214ENST00000478063 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
LMNA-214ENST00000478063 MSH6P52701 1360 aa18.26■□□□□ 0.51
LMNA-214ENST00000478063 MIER1Q8N108 512 aa18.25■□□□□ 0.51
LMNA-214ENST00000478063 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
LMNA-214ENST00000478063 KIF1AQ12756 1690 aa18.25■□□□□ 0.51
LMNA-214ENST00000478063 LTBP4Q8N2S1 1624 aa18.24■□□□□ 0.51
LMNA-214ENST00000478063 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
LMNA-214ENST00000478063 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
LMNA-214ENST00000478063 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
LMNA-214ENST00000478063 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
LMNA-214ENST00000478063 ATF3P18847 181 aa18.22■□□□□ 0.51
LMNA-214ENST00000478063 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
LMNA-214ENST00000478063 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
LMNA-214ENST00000478063 CPSF1Q10570 1443 aaKnown RBP18.21■□□□□ 0.51
LMNA-214ENST00000478063 MST1RQ04912 1400 aa18.2■□□□□ 0.5
LMNA-214ENST00000478063 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
LMNA-214ENST00000478063 CADPS2Q86UW7 1296 aa18.19■□□□□ 0.5
LMNA-214ENST00000478063 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
LMNA-214ENST00000478063 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
LMNA-214ENST00000478063 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
LMNA-214ENST00000478063 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
LMNA-214ENST00000478063 ACEP12821 1306 aa18.18■□□□□ 0.5
LMNA-214ENST00000478063 EDC4Q6P2E9 1401 aaKnown RBP18.17■□□□□ 0.5
LMNA-214ENST00000478063 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
LMNA-214ENST00000478063 POLR3AO14802 1390 aaPredicted RBP18.17■□□□□ 0.5
LMNA-214ENST00000478063 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
LMNA-214ENST00000478063 USP6P35125 1406 aa18.16■□□□□ 0.5
LMNA-214ENST00000478063 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
LMNA-214ENST00000478063 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
LMNA-214ENST00000478063 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
LMNA-214ENST00000478063 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
LMNA-214ENST00000478063 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
LMNA-214ENST00000478063 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
LMNA-214ENST00000478063 NSD2O96028 1365 aa18.14■□□□□ 0.49
LMNA-214ENST00000478063 RALBP1Q15311 655 aa18.13■□□□□ 0.49
LMNA-214ENST00000478063 ORAI2Q96SN7 254 aa18.13■□□□□ 0.49
LMNA-214ENST00000478063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
LMNA-214ENST00000478063 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
LMNA-214ENST00000478063 TRPM3Q9HCF6 1732 aaPredicted RBP18.12■□□□□ 0.49
LMNA-214ENST00000478063 MAP2P11137 1827 aaKnown RBP18.1■□□□□ 0.49
LMNA-214ENST00000478063 MARF1Q9Y4F3 1742 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms