RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 DDX17Q92841 729 aaKnown RBP47.23■■■■■ 5.15
CHKB-207ENST00000476289 LRP6O75581 1613 aa47.22■■■■■ 5.15
CHKB-207ENST00000476289 SPATA31A6Q5VVP1 1343 aa47.19■■■■■ 5.14
CHKB-207ENST00000476289 ORAI2Q96SN7 254 aa47.18■■■■■ 5.14
CHKB-207ENST00000476289 DHX57Q6P158 1386 aaKnown RBP47.13■■■■■ 5.14
CHKB-207ENST00000476289 DCAF11Q8TEB1 546 aa47.13■■■■■ 5.14
CHKB-207ENST00000476289 KDM2AQ9Y2K7 1162 aa47.11■■■■■ 5.13
CHKB-207ENST00000476289 ADGRB1O14514 1584 aa47.1■■■■■ 5.13
CHKB-207ENST00000476289 SIRT1Q96EB6 747 aa47.08■■■■■ 5.13
CHKB-207ENST00000476289 LRRC59Q96AG4 307 aaKnown RBP47.06■■■■■ 5.12
CHKB-207ENST00000476289 POTEAQ6S8J7 498 aa47.05■■■■■ 5.12
CHKB-207ENST00000476289 FMN2Q9NZ56 1722 aa47.05■■■■■ 5.12
CHKB-207ENST00000476289 PNPLA6Q8IY17 1366 aa47.02■■■■■ 5.12
CHKB-207ENST00000476289 DLC1Q96QB1 1528 aa47.01■■■■■ 5.12
CHKB-207ENST00000476289 NUTM2FA1L443 756 aa47■■■■■ 5.11
CHKB-207ENST00000476289 SOS2Q07890 1332 aaPredicted RBP47■■■■■ 5.11
CHKB-207ENST00000476289 ESCO1Q5FWF5 840 aa46.99■■■■■ 5.11
CHKB-207ENST00000476289 NUTM2BA6NNL0 878 aaPredicted RBP46.98■■■■■ 5.11
CHKB-207ENST00000476289 NUTM2EB1AL46 878 aaPredicted RBP46.98■■■■■ 5.11
CHKB-207ENST00000476289 MEX3CQ5U5Q3 659 aaKnown RBP46.98■■■■■ 5.11
CHKB-207ENST00000476289 NUTM2AQ8IVF1 878 aaPredicted RBP46.98■■■■■ 5.11
CHKB-207ENST00000476289 STAC3Q96MF2 364 aa46.98■■■■■ 5.11
CHKB-207ENST00000476289 PRAM1Q96QH2 718 aa46.98■■■■■ 5.11
CHKB-207ENST00000476289 SAFB2Q14151 953 aaKnown RBP eCLIP46.93■■■■■ 5.1
CHKB-207ENST00000476289 PXDNQ92626 1479 aa46.89■■■■■ 5.1
CHKB-207ENST00000476289 TRAK1Q9UPV9 953 aa46.89■■■■■ 5.1
CHKB-207ENST00000476289 NPHP3Q7Z494 1330 aa46.88■■■■■ 5.1
CHKB-207ENST00000476289 POGKQ9P215 609 aa46.86■■■■■ 5.09
CHKB-207ENST00000476289 FOXO3O43524 673 aa46.85■■■■■ 5.09
CHKB-207ENST00000476289 RGPD8O14715 1765 aaPredicted RBP46.84■■■■■ 5.09
CHKB-207ENST00000476289 ADGRB2O60241 1585 aa46.83■■■■■ 5.09
CHKB-207ENST00000476289 KIF1AQ12756 1690 aa46.83■■■■■ 5.09
CHKB-207ENST00000476289 XPCQ01831 940 aaPredicted RBP46.81■■■■■ 5.08
CHKB-207ENST00000476289 COL22A1Q8NFW1 1626 aaPredicted RBP46.79■■■■■ 5.08
CHKB-207ENST00000476289 ARHGEF28Q8N1W1 1705 aaKnown RBP46.76■■■■■ 5.08
CHKB-207ENST00000476289 ZNF772Q68DY9 489 aaPredicted RBP46.76■■■■■ 5.08
CHKB-207ENST00000476289 USP32Q8NFA0 1604 aa46.75■■■■■ 5.07
CHKB-207ENST00000476289 KIAA1210Q9ULL0 1709 aa46.74■■■■■ 5.07
CHKB-207ENST00000476289 HIRIP3Q9BW71 556 aaPredicted RBP46.72■■■■■ 5.07
CHKB-207ENST00000476289 AFF2P51816 1311 aa46.72■■■■■ 5.07
CHKB-207ENST00000476289 MINK1Q8N4C8 1332 aaPredicted RBP46.71■■■■■ 5.07
CHKB-207ENST00000476289 C8orf37Q96NL8 207 aa46.69■■■■■ 5.06
CHKB-207ENST00000476289 ADAMTS2O95450 1211 aa46.68■■■■■ 5.06
CHKB-207ENST00000476289 PHF8Q9UPP1 1060 aa46.68■■■■■ 5.06
CHKB-207ENST00000476289 ANKARQ7Z5J8 1434 aa46.68■■■■■ 5.06
CHKB-207ENST00000476289 SIN3AQ96ST3 1273 aa46.64■■■■■ 5.06
CHKB-207ENST00000476289 NBPF1Q3BBV0 1214 aa46.6■■■■■ 5.05
CHKB-207ENST00000476289 KRT28Q7Z3Y7 464 aa46.6■■■■■ 5.05
CHKB-207ENST00000476289 TULP4Q9NRJ4 1543 aa46.59■■■■■ 5.05
CHKB-207ENST00000476289 L3MBTL2Q969R5 705 aa46.59■■■■■ 5.05
CHKB-207ENST00000476289 SPATA31A3Q5VYP0 1347 aa46.58■■■■■ 5.05
CHKB-207ENST00000476289 PRR36Q9H6K5 1346 aa46.57■■■■■ 5.05
CHKB-207ENST00000476289 WASLO00401 505 aaPredicted RBP46.56■■■■■ 5.04
CHKB-207ENST00000476289 EIF3AQ14152 1382 aaKnown RBP46.55■■■■■ 5.04
CHKB-207ENST00000476289 NGLY1Q96IV0 654 aa46.54■■■■■ 5.04
CHKB-207ENST00000476289 PMFBP1Q8TBY8 1022 aa46.53■■■■■ 5.04
CHKB-207ENST00000476289 NEUROD1Q13562 356 aa46.51■■■■■ 5.04
CHKB-207ENST00000476289 TNS3Q68CZ2 1445 aa46.51■■■■■ 5.04
CHKB-207ENST00000476289 MARF1Q9Y4F3 1742 aaKnown RBP46.51■■■■■ 5.04
CHKB-207ENST00000476289 RXRBP28702 533 aa46.5■■■■■ 5.03
CHKB-207ENST00000476289 PSME1Q06323 249 aa46.46■■■■■ 5.03
CHKB-207ENST00000476289 SBNO1A3KN83 1393 aa46.45■■■■■ 5.03
CHKB-207ENST00000476289 QTRT2Q9H974 415 aaKnown RBP46.44■■■■■ 5.02
CHKB-207ENST00000476289 ATP7BP35670 1465 aa46.44■■■■■ 5.02
CHKB-207ENST00000476289 TRIM26Q12899 539 aaPredicted RBP46.43■■■■■ 5.02
CHKB-207ENST00000476289 TRPM3Q9HCF6 1732 aaPredicted RBP46.42■■■■■ 5.02
CHKB-207ENST00000476289 FNBP4Q8N3X1 1017 aaPredicted RBP46.41■■■■■ 5.02
CHKB-207ENST00000476289 CDK12Q9NYV4 1490 aaPredicted RBP46.41■■■■■ 5.02
CHKB-207ENST00000476289 TRPM1Q7Z4N2 1603 aa46.4■■■■■ 5.02
CHKB-207ENST00000476289 ITSN1Q15811 1721 aa46.4■■■■■ 5.02
CHKB-207ENST00000476289 USP21Q9UK80 565 aa46.39■■■■■ 5.02
CHKB-207ENST00000476289 ABCA3Q99758 1704 aa46.36■■■■■ 5.01
CHKB-207ENST00000476289 CDK19Q9BWU1 502 aa46.35■■■■■ 5.01
CHKB-207ENST00000476289 RBM6P78332 1123 aaKnown RBP46.34■■■■■ 5.01
CHKB-207ENST00000476289 NUDT16Q96DE0 195 aaKnown RBP46.34■■■■■ 5.01
CHKB-207ENST00000476289 ARHGEF10O15013 1369 aa46.34■■■■■ 5.01
CHKB-207ENST00000476289 LMOD2Q6P5Q4 547 aa46.33■■■■■ 5.01
CHKB-207ENST00000476289 CABLES1Q8TDN4 633 aa46.32■■■■■ 5.01
CHKB-207ENST00000476289 TOPAZ1Q8N9V7 1692 aa46.32■■■■■ 5.01
CHKB-207ENST00000476289 GPRASP1Q5JY77 1395 aa46.32■■■■■ 5.01
CHKB-207ENST00000476289 BCL9LQ86UU0 1499 aa46.31■■■■■ 5
CHKB-207ENST00000476289 RGS12O14924 1447 aa46.31■■■■■ 5
CHKB-207ENST00000476289 ALS2Q96Q42 1657 aa46.31■■■■■ 5
CHKB-207ENST00000476289 CENPJQ9HC77 1338 aaPredicted RBP46.3■■■■■ 5
CHKB-207ENST00000476289 QRICH2Q9H0J4 1663 aa46.3■■■■■ 5
CHKB-207ENST00000476289 ATRNO75882 1429 aa46.29■■■■■ 5
CHKB-207ENST00000476289 PLEKHG5O94827 1062 aa46.29■■■■■ 5
CHKB-207ENST00000476289 NGDNQ8NEJ9 315 aaKnown RBP46.28■■■■■ 5
CHKB-207ENST00000476289 TRPC5Q9UL62 973 aaPredicted RBP46.27■■■■■ 5
CHKB-207ENST00000476289 HAP1P54257 671 aaPredicted RBP46.23■■■■■ 4.99
CHKB-207ENST00000476289 SLIT2O94813 1529 aa46.23■■■■■ 4.99
CHKB-207ENST00000476289 TNKS1BP1Q9C0C2 1729 aaKnown RBP46.22■■■■■ 4.99
CHKB-207ENST00000476289 ROCK2O75116 1388 aaKnown RBP46.21■■■■■ 4.99
CHKB-207ENST00000476289 NBPF8Q3BBV2 869 aa46.2■■■■■ 4.99
CHKB-207ENST00000476289 CCDC61Q9Y6R9 512 aa46.17■■■■■ 4.98
CHKB-207ENST00000476289 POLR3AO14802 1390 aaPredicted RBP46.15■■■■■ 4.98
CHKB-207ENST00000476289 PLCH1Q4KWH8 1693 aa46.14■■■■■ 4.98
CHKB-207ENST00000476289 CRYBG1Q9Y4K1 1723 aa46.14■■■■■ 4.98
CHKB-207ENST00000476289 PAK3O75914 559 aaPredicted RBP46.12■■■■■ 4.97
CHKB-207ENST00000476289 SRPK2P78362 688 aaKnown RBP46.12■■■■■ 4.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms