RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 KDM2AQ9Y2K7 1162 aa32.9■■■□□ 2.86
PTP4A1-203ENST00000473334 PLEKHH1Q9ULM0 1364 aa32.89■■■□□ 2.86
PTP4A1-203ENST00000473334 SIRT1Q96EB6 747 aa32.88■■■□□ 2.85
PTP4A1-203ENST00000473334 ADGRB1O14514 1584 aa32.87■■■□□ 2.85
PTP4A1-203ENST00000473334 SPATA31A6Q5VVP1 1343 aa32.84■■■□□ 2.85
PTP4A1-203ENST00000473334 DLC1Q96QB1 1528 aa32.83■■■□□ 2.85
PTP4A1-203ENST00000473334 ORAI2Q96SN7 254 aa32.82■■■□□ 2.84
PTP4A1-203ENST00000473334 DDX17Q92841 729 aaKnown RBP32.81■■■□□ 2.84
PTP4A1-203ENST00000473334 FMN2Q9NZ56 1722 aa32.8■■■□□ 2.84
PTP4A1-203ENST00000473334 SOCS7O14512 581 aa32.79■■■□□ 2.84
PTP4A1-203ENST00000473334 LRP6O75581 1613 aa32.78■■■□□ 2.84
PTP4A1-203ENST00000473334 LRRC59Q96AG4 307 aaKnown RBP32.78■■■□□ 2.84
PTP4A1-203ENST00000473334 RGS17Q9UGC6 210 aaPredicted RBP32.78■■■□□ 2.84
PTP4A1-203ENST00000473334 PRAM1Q96QH2 718 aa32.76■■■□□ 2.83
PTP4A1-203ENST00000473334 ESCO1Q5FWF5 840 aa32.74■■■□□ 2.83
PTP4A1-203ENST00000473334 SOS2Q07890 1332 aaPredicted RBP32.72■■■□□ 2.83
PTP4A1-203ENST00000473334 NUTM2FA1L443 756 aa32.71■■■□□ 2.83
PTP4A1-203ENST00000473334 POGKQ9P215 609 aa32.71■■■□□ 2.83
PTP4A1-203ENST00000473334 TRAK1Q9UPV9 953 aa32.71■■■□□ 2.83
PTP4A1-203ENST00000473334 KIAA1210Q9ULL0 1709 aa32.71■■■□□ 2.83
PTP4A1-203ENST00000473334 PNPLA6Q8IY17 1366 aa32.7■■■□□ 2.83
PTP4A1-203ENST00000473334 SAFB2Q14151 953 aaKnown RBP eCLIP32.7■■■□□ 2.83
PTP4A1-203ENST00000473334 ADGRB2O60241 1585 aa32.69■■■□□ 2.82
PTP4A1-203ENST00000473334 MEX3CQ5U5Q3 659 aaKnown RBP32.68■■■□□ 2.82
PTP4A1-203ENST00000473334 NPHP3Q7Z494 1330 aa32.68■■■□□ 2.82
PTP4A1-203ENST00000473334 KIF1AQ12756 1690 aa32.68■■■□□ 2.82
PTP4A1-203ENST00000473334 ARHGEF28Q8N1W1 1705 aaKnown RBP32.65■■■□□ 2.82
PTP4A1-203ENST00000473334 NUTM2BA6NNL0 878 aaPredicted RBP32.65■■■□□ 2.82
PTP4A1-203ENST00000473334 NUTM2EB1AL46 878 aaPredicted RBP32.65■■■□□ 2.82
PTP4A1-203ENST00000473334 TRIM26Q12899 539 aaPredicted RBP32.65■■■□□ 2.82
PTP4A1-203ENST00000473334 NUTM2AQ8IVF1 878 aaPredicted RBP32.65■■■□□ 2.82
PTP4A1-203ENST00000473334 RGPD8O14715 1765 aaPredicted RBP32.65■■■□□ 2.82
PTP4A1-203ENST00000473334 PXDNQ92626 1479 aa32.64■■■□□ 2.82
PTP4A1-203ENST00000473334 POTEAQ6S8J7 498 aa32.62■■■□□ 2.81
PTP4A1-203ENST00000473334 FOXO3O43524 673 aa32.61■■■□□ 2.81
PTP4A1-203ENST00000473334 SIN3AQ96ST3 1273 aa32.6■■■□□ 2.81
PTP4A1-203ENST00000473334 COL22A1Q8NFW1 1626 aaPredicted RBP32.59■■■□□ 2.81
PTP4A1-203ENST00000473334 ANKARQ7Z5J8 1434 aa32.58■■■□□ 2.81
PTP4A1-203ENST00000473334 USP32Q8NFA0 1604 aa32.58■■■□□ 2.81
PTP4A1-203ENST00000473334 MINK1Q8N4C8 1332 aaPredicted RBP32.56■■■□□ 2.8
PTP4A1-203ENST00000473334 L3MBTL2Q969R5 705 aa32.56■■■□□ 2.8
PTP4A1-203ENST00000473334 HIRIP3Q9BW71 556 aaPredicted RBP32.56■■■□□ 2.8
PTP4A1-203ENST00000473334 XPCQ01831 940 aaPredicted RBP32.55■■■□□ 2.8
PTP4A1-203ENST00000473334 PHF8Q9UPP1 1060 aa32.54■■■□□ 2.8
PTP4A1-203ENST00000473334 EIF3AQ14152 1382 aaKnown RBP32.54■■■□□ 2.8
PTP4A1-203ENST00000473334 NEUROD1Q13562 356 aa32.53■■■□□ 2.8
PTP4A1-203ENST00000473334 ZNF772Q68DY9 489 aaPredicted RBP32.53■■■□□ 2.8
PTP4A1-203ENST00000473334 TULP4Q9NRJ4 1543 aa32.52■■■□□ 2.8
PTP4A1-203ENST00000473334 NBPF1Q3BBV0 1214 aa32.51■■■□□ 2.79
PTP4A1-203ENST00000473334 WASLO00401 505 aaPredicted RBP32.49■■■□□ 2.79
PTP4A1-203ENST00000473334 KRT28Q7Z3Y7 464 aa32.47■■■□□ 2.79
PTP4A1-203ENST00000473334 AFF2P51816 1311 aa32.47■■■□□ 2.79
PTP4A1-203ENST00000473334 C8orf37Q96NL8 207 aa32.46■■■□□ 2.79
PTP4A1-203ENST00000473334 TRPM1Q7Z4N2 1603 aa32.45■■■□□ 2.79
PTP4A1-203ENST00000473334 SPATA31A3Q5VYP0 1347 aa32.45■■■□□ 2.78
PTP4A1-203ENST00000473334 ADAMTS2O95450 1211 aa32.44■■■□□ 2.78
PTP4A1-203ENST00000473334 PRR36Q9H6K5 1346 aa32.44■■■□□ 2.78
PTP4A1-203ENST00000473334 PSME1Q06323 249 aa32.42■■■□□ 2.78
PTP4A1-203ENST00000473334 PMFBP1Q8TBY8 1022 aa32.42■■■□□ 2.78
PTP4A1-203ENST00000473334 ITSN1Q15811 1721 aa32.42■■■□□ 2.78
PTP4A1-203ENST00000473334 TNS3Q68CZ2 1445 aa32.41■■■□□ 2.78
PTP4A1-203ENST00000473334 MARF1Q9Y4F3 1742 aaKnown RBP32.4■■■□□ 2.78
PTP4A1-203ENST00000473334 SBNO1A3KN83 1393 aa32.39■■■□□ 2.78
PTP4A1-203ENST00000473334 ATP7BP35670 1465 aa32.39■■■□□ 2.78
PTP4A1-203ENST00000473334 NGLY1Q96IV0 654 aa32.38■■■□□ 2.77
PTP4A1-203ENST00000473334 TRPM3Q9HCF6 1732 aaPredicted RBP32.35■■■□□ 2.77
PTP4A1-203ENST00000473334 CENPJQ9HC77 1338 aaPredicted RBP32.35■■■□□ 2.77
PTP4A1-203ENST00000473334 QRICH2Q9H0J4 1663 aa32.35■■■□□ 2.77
PTP4A1-203ENST00000473334 CDK19Q9BWU1 502 aa32.34■■■□□ 2.77
PTP4A1-203ENST00000473334 NUDT16Q96DE0 195 aaKnown RBP32.33■■■□□ 2.77
PTP4A1-203ENST00000473334 GPRASP1Q5JY77 1395 aa32.32■■■□□ 2.77
PTP4A1-203ENST00000473334 TOPAZ1Q8N9V7 1692 aa32.32■■■□□ 2.76
PTP4A1-203ENST00000473334 RXRBP28702 533 aa32.32■■■□□ 2.76
PTP4A1-203ENST00000473334 ARHGEF10O15013 1369 aa32.32■■■□□ 2.76
PTP4A1-203ENST00000473334 ROCK2O75116 1388 aaKnown RBP32.32■■■□□ 2.76
PTP4A1-203ENST00000473334 TONSLQ96HA7 1378 aa32.3■■■□□ 2.76
PTP4A1-203ENST00000473334 FNBP4Q8N3X1 1017 aaPredicted RBP32.29■■■□□ 2.76
PTP4A1-203ENST00000473334 ABCA3Q99758 1704 aa32.29■■■□□ 2.76
PTP4A1-203ENST00000473334 ALS2Q96Q42 1657 aa32.28■■■□□ 2.76
PTP4A1-203ENST00000473334 NGDNQ8NEJ9 315 aaKnown RBP32.28■■■□□ 2.76
PTP4A1-203ENST00000473334 QTRT2Q9H974 415 aaKnown RBP32.28■■■□□ 2.76
PTP4A1-203ENST00000473334 CDK12Q9NYV4 1490 aaPredicted RBP32.28■■■□□ 2.76
PTP4A1-203ENST00000473334 NBPF8Q3BBV2 869 aa32.27■■■□□ 2.76
PTP4A1-203ENST00000473334 LMOD2Q6P5Q4 547 aa32.27■■■□□ 2.76
PTP4A1-203ENST00000473334 USP21Q9UK80 565 aa32.27■■■□□ 2.76
PTP4A1-203ENST00000473334 RBM6P78332 1123 aaKnown RBP32.23■■■□□ 2.75
PTP4A1-203ENST00000473334 CCDC61Q9Y6R9 512 aa32.23■■■□□ 2.75
PTP4A1-203ENST00000473334 HAP1P54257 671 aaPredicted RBP32.22■■■□□ 2.75
PTP4A1-203ENST00000473334 SRPK2P78362 688 aaKnown RBP32.21■■■□□ 2.75
PTP4A1-203ENST00000473334 CABLES1Q8TDN4 633 aa32.21■■■□□ 2.75
PTP4A1-203ENST00000473334 TRPC5Q9UL62 973 aaPredicted RBP32.21■■■□□ 2.75
PTP4A1-203ENST00000473334 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.2■■■□□ 2.74
PTP4A1-203ENST00000473334 POLR3AO14802 1390 aaPredicted RBP32.19■■■□□ 2.74
PTP4A1-203ENST00000473334 ATRNO75882 1429 aa32.19■■■□□ 2.74
PTP4A1-203ENST00000473334 BCL9LQ86UU0 1499 aa32.19■■■□□ 2.74
PTP4A1-203ENST00000473334 RALGAPBQ86X10 1494 aa32.18■■■□□ 2.74
PTP4A1-203ENST00000473334 PLEKHG5O94827 1062 aa32.18■■■□□ 2.74
PTP4A1-203ENST00000473334 PLEKHG3A1L390 1219 aa32.17■■■□□ 2.74
PTP4A1-203ENST00000473334 SLIT2O94813 1529 aa32.16■■■□□ 2.74
PTP4A1-203ENST00000473334 PAK3O75914 559 aaPredicted RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms