RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 SIRT1Q96EB6 747 aa24.43■■□□□ 1.5
RPL39-202ENST00000468844 MYOM1P52179 1685 aa24.42■■□□□ 1.5
RPL39-202ENST00000468844 KCNA6P17658 529 aa24.41■■□□□ 1.5
RPL39-202ENST00000468844 ADGRB2O60241 1585 aa24.39■■□□□ 1.49
RPL39-202ENST00000468844 SLC24A1O60721 1099 aa24.38■■□□□ 1.49
RPL39-202ENST00000468844 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
RPL39-202ENST00000468844 MINK1Q8N4C8 1332 aaPredicted RBP24.38■■□□□ 1.49
RPL39-202ENST00000468844 POLR3GLQ9BT43 218 aa24.35■■□□□ 1.49
RPL39-202ENST00000468844 NKTRP30414 1462 aaKnown RBP24.35■■□□□ 1.49
RPL39-202ENST00000468844 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
RPL39-202ENST00000468844 EVC2Q86UK5 1308 aa24.33■■□□□ 1.48
RPL39-202ENST00000468844 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.48
RPL39-202ENST00000468844 CDCA8Q53HL2 280 aa24.31■■□□□ 1.48
RPL39-202ENST00000468844 RGPD8O14715 1765 aaPredicted RBP24.3■■□□□ 1.48
RPL39-202ENST00000468844 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
RPL39-202ENST00000468844 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
RPL39-202ENST00000468844 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
RPL39-202ENST00000468844 FMN2Q9NZ56 1722 aa24.26■■□□□ 1.47
RPL39-202ENST00000468844 CABP2Q9NPB3 220 aa24.26■■□□□ 1.47
RPL39-202ENST00000468844 RBM33Q96EV2 1170 aaKnown RBP24.25■■□□□ 1.47
RPL39-202ENST00000468844 CDK19Q9BWU1 502 aa24.25■■□□□ 1.47
RPL39-202ENST00000468844 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
RPL39-202ENST00000468844 USP32Q8NFA0 1604 aa24.25■■□□□ 1.47
RPL39-202ENST00000468844 WASLO00401 505 aaPredicted RBP24.25■■□□□ 1.47
RPL39-202ENST00000468844 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
RPL39-202ENST00000468844 PUS7Q96PZ0 661 aaKnown RBP24.24■■□□□ 1.47
RPL39-202ENST00000468844 TOPAZ1Q8N9V7 1692 aa24.24■■□□□ 1.47
RPL39-202ENST00000468844 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
RPL39-202ENST00000468844 ADGRL3Q9HAR2 1447 aa24.24■■□□□ 1.47
RPL39-202ENST00000468844 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
RPL39-202ENST00000468844 ATP7BP35670 1465 aa24.22■■□□□ 1.47
RPL39-202ENST00000468844 PROSER2Q86WR7 435 aaPredicted RBP24.21■■□□□ 1.47
RPL39-202ENST00000468844 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
RPL39-202ENST00000468844 TMEM94Q12767 1356 aa24.19■■□□□ 1.46
RPL39-202ENST00000468844 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
RPL39-202ENST00000468844 PRR36Q9H6K5 1346 aa24.16■■□□□ 1.46
RPL39-202ENST00000468844 AKAP12Q02952 1782 aa24.15■■□□□ 1.46
RPL39-202ENST00000468844 NCOA3Q9Y6Q9 1424 aa24.15■■□□□ 1.46
RPL39-202ENST00000468844 TMC1Q8TDI8 760 aa24.15■■□□□ 1.46
RPL39-202ENST00000468844 SLC12A5Q9H2X9 1139 aa24.15■■□□□ 1.46
RPL39-202ENST00000468844 NINLQ9Y2I6 1382 aa24.14■■□□□ 1.46
RPL39-202ENST00000468844 NUDT16Q96DE0 195 aaKnown RBP24.14■■□□□ 1.45
RPL39-202ENST00000468844 PANK3Q9H999 370 aa24.14■■□□□ 1.45
RPL39-202ENST00000468844 C14orf37Q86TY3 774 aa24.13■■□□□ 1.45
RPL39-202ENST00000468844 CD163L1Q9NR16 1453 aa24.13■■□□□ 1.45
RPL39-202ENST00000468844 PPIP5K1Q6PFW1 1433 aa24.13■■□□□ 1.45
RPL39-202ENST00000468844 NUTM2FA1L443 756 aa24.12■■□□□ 1.45
RPL39-202ENST00000468844 LTBP4Q8N2S1 1624 aa24.11■■□□□ 1.45
RPL39-202ENST00000468844 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
RPL39-202ENST00000468844 ANKARQ7Z5J8 1434 aa24.1■■□□□ 1.45
RPL39-202ENST00000468844 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
RPL39-202ENST00000468844 CCDC61Q9Y6R9 512 aa24.1■■□□□ 1.45
RPL39-202ENST00000468844 ANKRD36BQ8N2N9 1353 aa24.09■■□□□ 1.45
RPL39-202ENST00000468844 C19orf44Q9H6X5 657 aa24.09■■□□□ 1.45
RPL39-202ENST00000468844 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
RPL39-202ENST00000468844 DCCP43146 1447 aa24.08■■□□□ 1.45
RPL39-202ENST00000468844 A0A1W2PP64 1363 aa24.08■■□□□ 1.45
RPL39-202ENST00000468844 CARD14Q9BXL6 1004 aa24.05■■□□□ 1.44
RPL39-202ENST00000468844 MSH6P52701 1360 aa24.04■■□□□ 1.44
RPL39-202ENST00000468844 KIF20BQ96Q89 1820 aa24.03■■□□□ 1.44
RPL39-202ENST00000468844 CPSF1Q10570 1443 aaKnown RBP24.03■■□□□ 1.44
RPL39-202ENST00000468844 NRKQ7Z2Y5 1582 aa24.03■■□□□ 1.44
RPL39-202ENST00000468844 NSD3Q9BZ95 1437 aa24.02■■□□□ 1.44
RPL39-202ENST00000468844 MST1RQ04912 1400 aa24.01■■□□□ 1.43
RPL39-202ENST00000468844 TERF2IPQ9NYB0 399 aa24.01■■□□□ 1.43
RPL39-202ENST00000468844 PLEKHG3A1L390 1219 aa24■■□□□ 1.43
RPL39-202ENST00000468844 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
RPL39-202ENST00000468844 C1orf167Q5SNV9 1468 aa23.99■■□□□ 1.43
RPL39-202ENST00000468844 ANKRD26Q9UPS8 1709 aa23.99■■□□□ 1.43
RPL39-202ENST00000468844 ATF3P18847 181 aa23.99■■□□□ 1.43
RPL39-202ENST00000468844 MIER1Q8N108 512 aa23.99■■□□□ 1.43
RPL39-202ENST00000468844 KIF1AQ12756 1690 aa23.99■■□□□ 1.43
RPL39-202ENST00000468844 HDGFL2Q7Z4V5 671 aaPredicted RBP23.98■■□□□ 1.43
RPL39-202ENST00000468844 ANP32CO43423 234 aa23.98■■□□□ 1.43
RPL39-202ENST00000468844 CADPS2Q86UW7 1296 aa23.98■■□□□ 1.43
RPL39-202ENST00000468844 PMFBP1Q8TBY8 1022 aa23.98■■□□□ 1.43
RPL39-202ENST00000468844 POLR3AO14802 1390 aaPredicted RBP23.97■■□□□ 1.43
RPL39-202ENST00000468844 ACEP12821 1306 aa23.97■■□□□ 1.43
RPL39-202ENST00000468844 AMER1Q5JTC6 1135 aaPredicted RBP23.97■■□□□ 1.43
RPL39-202ENST00000468844 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
RPL39-202ENST00000468844 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
RPL39-202ENST00000468844 PRKRIP1Q9H875 184 aaPredicted RBP23.96■■□□□ 1.43
RPL39-202ENST00000468844 ESCO1Q5FWF5 840 aa23.94■■□□□ 1.42
RPL39-202ENST00000468844 NPC1L1Q9UHC9 1359 aa23.93■■□□□ 1.42
RPL39-202ENST00000468844 ORAI2Q96SN7 254 aa23.93■■□□□ 1.42
RPL39-202ENST00000468844 PHF8Q9UPP1 1060 aa23.93■■□□□ 1.42
RPL39-202ENST00000468844 USP6P35125 1406 aa23.93■■□□□ 1.42
RPL39-202ENST00000468844 EDC4Q6P2E9 1401 aaKnown RBP23.93■■□□□ 1.42
RPL39-202ENST00000468844 CC2D1BQ5T0F9 858 aaKnown RBP23.92■■□□□ 1.42
RPL39-202ENST00000468844 ZNF692Q9BU19 519 aaPredicted RBP23.92■■□□□ 1.42
RPL39-202ENST00000468844 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
RPL39-202ENST00000468844 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
RPL39-202ENST00000468844 CGNL1Q0VF96 1302 aa23.9■■□□□ 1.42
RPL39-202ENST00000468844 SSH2Q76I76 1423 aa23.89■■□□□ 1.42
RPL39-202ENST00000468844 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
RPL39-202ENST00000468844 TRPM3Q9HCF6 1732 aaPredicted RBP23.88■■□□□ 1.41
RPL39-202ENST00000468844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
RPL39-202ENST00000468844 NSD2O96028 1365 aa23.86■■□□□ 1.41
RPL39-202ENST00000468844 MARF1Q9Y4F3 1742 aaKnown RBP23.86■■□□□ 1.41
RPL39-202ENST00000468844 SLAIN2Q9P270 581 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms