RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PLEKHH1Q9ULM0 1364 aa24.95■■□□□ 1.59
SSBP1-207ENST00000468267 SOCS7O14512 581 aa24.95■■□□□ 1.58
SSBP1-207ENST00000468267 CDC42BPGQ6DT37 1551 aa24.95■■□□□ 1.58
SSBP1-207ENST00000468267 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
SSBP1-207ENST00000468267 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
SSBP1-207ENST00000468267 DDX17Q92841 729 aaKnown RBP24.93■■□□□ 1.58
SSBP1-207ENST00000468267 ORAI2Q96SN7 254 aa24.93■■□□□ 1.58
SSBP1-207ENST00000468267 SPATA31A6Q5VVP1 1343 aa24.92■■□□□ 1.58
SSBP1-207ENST00000468267 LRRC59Q96AG4 307 aaKnown RBP24.9■■□□□ 1.58
SSBP1-207ENST00000468267 ADGRB1O14514 1584 aa24.89■■□□□ 1.58
SSBP1-207ENST00000468267 DLC1Q96QB1 1528 aa24.86■■□□□ 1.57
SSBP1-207ENST00000468267 ESCO1Q5FWF5 840 aa24.86■■□□□ 1.57
SSBP1-207ENST00000468267 PRAM1Q96QH2 718 aa24.86■■□□□ 1.57
SSBP1-207ENST00000468267 LRP6O75581 1613 aa24.86■■□□□ 1.57
SSBP1-207ENST00000468267 FMN2Q9NZ56 1722 aa24.85■■□□□ 1.57
SSBP1-207ENST00000468267 SOS2Q07890 1332 aaPredicted RBP24.85■■□□□ 1.57
SSBP1-207ENST00000468267 NUTM2FA1L443 756 aa24.83■■□□□ 1.57
SSBP1-207ENST00000468267 POGKQ9P215 609 aa24.83■■□□□ 1.57
SSBP1-207ENST00000468267 SAFB2Q14151 953 aaKnown RBP eCLIP24.82■■□□□ 1.56
SSBP1-207ENST00000468267 TRAK1Q9UPV9 953 aa24.82■■□□□ 1.56
SSBP1-207ENST00000468267 PNPLA6Q8IY17 1366 aa24.81■■□□□ 1.56
SSBP1-207ENST00000468267 MEX3CQ5U5Q3 659 aaKnown RBP24.81■■□□□ 1.56
SSBP1-207ENST00000468267 POTEAQ6S8J7 498 aa24.81■■□□□ 1.56
SSBP1-207ENST00000468267 NUTM2BA6NNL0 878 aaPredicted RBP24.8■■□□□ 1.56
SSBP1-207ENST00000468267 NUTM2EB1AL46 878 aaPredicted RBP24.8■■□□□ 1.56
SSBP1-207ENST00000468267 NUTM2AQ8IVF1 878 aaPredicted RBP24.8■■□□□ 1.56
SSBP1-207ENST00000468267 NPHP3Q7Z494 1330 aa24.8■■□□□ 1.56
SSBP1-207ENST00000468267 RGPD8O14715 1765 aaPredicted RBP24.77■■□□□ 1.56
SSBP1-207ENST00000468267 FOXO3O43524 673 aa24.77■■□□□ 1.56
SSBP1-207ENST00000468267 KIAA1210Q9ULL0 1709 aa24.76■■□□□ 1.55
SSBP1-207ENST00000468267 PXDNQ92626 1479 aa24.75■■□□□ 1.55
SSBP1-207ENST00000468267 TRIM26Q12899 539 aaPredicted RBP24.74■■□□□ 1.55
SSBP1-207ENST00000468267 SIN3AQ96ST3 1273 aa24.74■■□□□ 1.55
SSBP1-207ENST00000468267 ADGRB2O60241 1585 aa24.74■■□□□ 1.55
SSBP1-207ENST00000468267 KIF1AQ12756 1690 aa24.73■■□□□ 1.55
SSBP1-207ENST00000468267 XPCQ01831 940 aaPredicted RBP24.72■■□□□ 1.55
SSBP1-207ENST00000468267 MINK1Q8N4C8 1332 aaPredicted RBP24.71■■□□□ 1.55
SSBP1-207ENST00000468267 ZNF772Q68DY9 489 aaPredicted RBP24.71■■□□□ 1.55
SSBP1-207ENST00000468267 L3MBTL2Q969R5 705 aa24.71■■□□□ 1.55
SSBP1-207ENST00000468267 HIRIP3Q9BW71 556 aaPredicted RBP24.71■■□□□ 1.55
SSBP1-207ENST00000468267 PHF8Q9UPP1 1060 aa24.71■■□□□ 1.55
SSBP1-207ENST00000468267 ARHGEF28Q8N1W1 1705 aaKnown RBP24.71■■□□□ 1.55
SSBP1-207ENST00000468267 COL22A1Q8NFW1 1626 aaPredicted RBP24.69■■□□□ 1.54
SSBP1-207ENST00000468267 NBPF1Q3BBV0 1214 aa24.69■■□□□ 1.54
SSBP1-207ENST00000468267 ANKARQ7Z5J8 1434 aa24.69■■□□□ 1.54
SSBP1-207ENST00000468267 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
SSBP1-207ENST00000468267 USP32Q8NFA0 1604 aa24.68■■□□□ 1.54
SSBP1-207ENST00000468267 WASLO00401 505 aaPredicted RBP24.66■■□□□ 1.54
SSBP1-207ENST00000468267 KRT28Q7Z3Y7 464 aa24.66■■□□□ 1.54
SSBP1-207ENST00000468267 AFF2P51816 1311 aa24.65■■□□□ 1.54
SSBP1-207ENST00000468267 C8orf37Q96NL8 207 aa24.65■■□□□ 1.54
SSBP1-207ENST00000468267 EIF3AQ14152 1382 aaKnown RBP24.65■■□□□ 1.54
SSBP1-207ENST00000468267 ADAMTS2O95450 1211 aa24.64■■□□□ 1.54
SSBP1-207ENST00000468267 SPATA31A3Q5VYP0 1347 aa24.63■■□□□ 1.53
SSBP1-207ENST00000468267 TULP4Q9NRJ4 1543 aa24.62■■□□□ 1.53
SSBP1-207ENST00000468267 MSH5O43196 834 aa24.62■■□□□ 1.53
SSBP1-207ENST00000468267 PSME1Q06323 249 aa24.62■■□□□ 1.53
SSBP1-207ENST00000468267 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
SSBP1-207ENST00000468267 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
SSBP1-207ENST00000468267 NGLY1Q96IV0 654 aa24.61■■□□□ 1.53
SSBP1-207ENST00000468267 SBNO1A3KN83 1393 aa24.57■■□□□ 1.52
SSBP1-207ENST00000468267 TNS3Q68CZ2 1445 aa24.56■■□□□ 1.52
SSBP1-207ENST00000468267 RXRBP28702 533 aa24.56■■□□□ 1.52
SSBP1-207ENST00000468267 CDK19Q9BWU1 502 aa24.56■■□□□ 1.52
SSBP1-207ENST00000468267 TRPM1Q7Z4N2 1603 aa24.56■■□□□ 1.52
SSBP1-207ENST00000468267 MARF1Q9Y4F3 1742 aaKnown RBP24.55■■□□□ 1.52
SSBP1-207ENST00000468267 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
SSBP1-207ENST00000468267 QTRT2Q9H974 415 aaKnown RBP24.55■■□□□ 1.52
SSBP1-207ENST00000468267 FNBP4Q8N3X1 1017 aaPredicted RBP24.54■■□□□ 1.52
SSBP1-207ENST00000468267 ITSN1Q15811 1721 aa24.53■■□□□ 1.52
SSBP1-207ENST00000468267 CENPJQ9HC77 1338 aaPredicted RBP24.53■■□□□ 1.52
SSBP1-207ENST00000468267 ATP7BP35670 1465 aa24.52■■□□□ 1.52
SSBP1-207ENST00000468267 GPRASP1Q5JY77 1395 aa24.52■■□□□ 1.52
SSBP1-207ENST00000468267 NGDNQ8NEJ9 315 aaKnown RBP24.51■■□□□ 1.51
SSBP1-207ENST00000468267 USP21Q9UK80 565 aa24.51■■□□□ 1.51
SSBP1-207ENST00000468267 TRPM3Q9HCF6 1732 aaPredicted RBP24.51■■□□□ 1.51
SSBP1-207ENST00000468267 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
SSBP1-207ENST00000468267 LMOD2Q6P5Q4 547 aa24.5■■□□□ 1.51
SSBP1-207ENST00000468267 POTEDQ86YR6 584 aa24.5■■□□□ 1.51
SSBP1-207ENST00000468267 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
SSBP1-207ENST00000468267 NBPF8Q3BBV2 869 aa24.49■■□□□ 1.51
SSBP1-207ENST00000468267 CDK12Q9NYV4 1490 aaPredicted RBP24.49■■□□□ 1.51
SSBP1-207ENST00000468267 ROCK2O75116 1388 aaKnown RBP24.48■■□□□ 1.51
SSBP1-207ENST00000468267 QRICH2Q9H0J4 1663 aa24.48■■□□□ 1.51
SSBP1-207ENST00000468267 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
SSBP1-207ENST00000468267 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
SSBP1-207ENST00000468267 TRPC5Q9UL62 973 aaPredicted RBP24.46■■□□□ 1.51
SSBP1-207ENST00000468267 TOPAZ1Q8N9V7 1692 aa24.46■■□□□ 1.51
SSBP1-207ENST00000468267 ALS2Q96Q42 1657 aa24.46■■□□□ 1.51
SSBP1-207ENST00000468267 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
SSBP1-207ENST00000468267 BCL9LQ86UU0 1499 aa24.45■■□□□ 1.5
SSBP1-207ENST00000468267 PLEKHG3A1L390 1219 aa24.44■■□□□ 1.5
SSBP1-207ENST00000468267 HAP1P54257 671 aaPredicted RBP24.44■■□□□ 1.5
SSBP1-207ENST00000468267 ABCA3Q99758 1704 aa24.44■■□□□ 1.5
SSBP1-207ENST00000468267 PLEKHG5O94827 1062 aa24.43■■□□□ 1.5
SSBP1-207ENST00000468267 SRPK2P78362 688 aaKnown RBP24.43■■□□□ 1.5
SSBP1-207ENST00000468267 ATRNO75882 1429 aa24.43■■□□□ 1.5
SSBP1-207ENST00000468267 POLR3AO14802 1390 aaPredicted RBP24.42■■□□□ 1.5
SSBP1-207ENST00000468267 ACEP12821 1306 aa24.41■■□□□ 1.5
SSBP1-207ENST00000468267 PAK3O75914 559 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms