RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 TECPR2O15040 1411 aa19.81■□□□□ 0.76
UBA3-209ENST00000466763 KNDC1Q76NI1 1749 aa19.81■□□□□ 0.76
UBA3-209ENST00000466763 PLEKHH1Q9ULM0 1364 aa19.81■□□□□ 0.76
UBA3-209ENST00000466763 CADPS2Q86UW7 1296 aa19.8■□□□□ 0.76
UBA3-209ENST00000466763 ROCK2O75116 1388 aaKnown RBP19.8■□□□□ 0.76
UBA3-209ENST00000466763 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.79■□□□□ 0.76
UBA3-209ENST00000466763 SIRT1Q96EB6 747 aa19.79■□□□□ 0.76
UBA3-209ENST00000466763 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
UBA3-209ENST00000466763 ADGRL3Q9HAR2 1447 aa19.78■□□□□ 0.76
UBA3-209ENST00000466763 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
UBA3-209ENST00000466763 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
UBA3-209ENST00000466763 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
UBA3-209ENST00000466763 NALCNQ8IZF0 1738 aa19.76■□□□□ 0.75
UBA3-209ENST00000466763 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
UBA3-209ENST00000466763 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
UBA3-209ENST00000466763 DLC1Q96QB1 1528 aa19.75■□□□□ 0.75
UBA3-209ENST00000466763 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
UBA3-209ENST00000466763 NUTM2FA1L443 756 aa19.73■□□□□ 0.75
UBA3-209ENST00000466763 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
UBA3-209ENST00000466763 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
UBA3-209ENST00000466763 DCCP43146 1447 aa19.71■□□□□ 0.75
UBA3-209ENST00000466763 RALGAPBQ86X10 1494 aa19.7■□□□□ 0.74
UBA3-209ENST00000466763 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
UBA3-209ENST00000466763 GPRASP1Q5JY77 1395 aa19.67■□□□□ 0.74
UBA3-209ENST00000466763 MST1RQ04912 1400 aa19.67■□□□□ 0.74
UBA3-209ENST00000466763 ROBO1Q9Y6N7 1651 aa19.66■□□□□ 0.74
UBA3-209ENST00000466763 EIF3AQ14152 1382 aaKnown RBP19.66■□□□□ 0.74
UBA3-209ENST00000466763 CDC42BPGQ6DT37 1551 aa19.66■□□□□ 0.74
UBA3-209ENST00000466763 HSPA1LP34931 641 aa19.65■□□□□ 0.74
UBA3-209ENST00000466763 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
UBA3-209ENST00000466763 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
UBA3-209ENST00000466763 ORAI2Q96SN7 254 aa19.64■□□□□ 0.73
UBA3-209ENST00000466763 C1orf167Q5SNV9 1468 aa19.64■□□□□ 0.73
UBA3-209ENST00000466763 WASLO00401 505 aaPredicted RBP19.63■□□□□ 0.73
UBA3-209ENST00000466763 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
UBA3-209ENST00000466763 FMN2Q9NZ56 1722 aa19.61■□□□□ 0.73
UBA3-209ENST00000466763 QRICH2Q9H0J4 1663 aa19.61■□□□□ 0.73
UBA3-209ENST00000466763 HOXD11P31277 338 aaPredicted RBP19.59■□□□□ 0.73
UBA3-209ENST00000466763 SRPK2P78362 688 aaKnown RBP19.59■□□□□ 0.73
UBA3-209ENST00000466763 DDX17Q92841 729 aaKnown RBP19.59■□□□□ 0.73
UBA3-209ENST00000466763 ADGRB2O60241 1585 aa19.58■□□□□ 0.73
UBA3-209ENST00000466763 RGPD8O14715 1765 aaPredicted RBP19.57■□□□□ 0.72
UBA3-209ENST00000466763 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
UBA3-209ENST00000466763 PMFBP1Q8TBY8 1022 aa19.56■□□□□ 0.72
UBA3-209ENST00000466763 NUDT16Q96DE0 195 aaKnown RBP19.56■□□□□ 0.72
UBA3-209ENST00000466763 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
UBA3-209ENST00000466763 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
UBA3-209ENST00000466763 USP47Q96K76 1375 aa19.56■□□□□ 0.72
UBA3-209ENST00000466763 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
UBA3-209ENST00000466763 PHF8Q9UPP1 1060 aa19.55■□□□□ 0.72
UBA3-209ENST00000466763 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
UBA3-209ENST00000466763 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
UBA3-209ENST00000466763 FOXO3O43524 673 aa19.54■□□□□ 0.72
UBA3-209ENST00000466763 TULP4Q9NRJ4 1543 aa19.53■□□□□ 0.72
UBA3-209ENST00000466763 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
UBA3-209ENST00000466763 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
UBA3-209ENST00000466763 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
UBA3-209ENST00000466763 PSME1Q06323 249 aa19.5■□□□□ 0.71
UBA3-209ENST00000466763 NGDNQ8NEJ9 315 aaKnown RBP19.5■□□□□ 0.71
UBA3-209ENST00000466763 AHDC1Q5TGY3 1603 aaPredicted RBP19.5■□□□□ 0.71
UBA3-209ENST00000466763 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
UBA3-209ENST00000466763 CCDC61Q9Y6R9 512 aa19.49■□□□□ 0.71
UBA3-209ENST00000466763 NHSL1Q5SYE7 1610 aa19.48■□□□□ 0.71
UBA3-209ENST00000466763 KRT28Q7Z3Y7 464 aa19.48■□□□□ 0.71
UBA3-209ENST00000466763 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
UBA3-209ENST00000466763 KIF1AQ12756 1690 aa19.48■□□□□ 0.71
UBA3-209ENST00000466763 ATP7BP35670 1465 aa19.48■□□□□ 0.71
UBA3-209ENST00000466763 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
UBA3-209ENST00000466763 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
UBA3-209ENST00000466763 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
UBA3-209ENST00000466763 HSPA5P11021 654 aaKnown RBP19.46■□□□□ 0.71
UBA3-209ENST00000466763 TESK2Q96S53 571 aa19.46■□□□□ 0.71
UBA3-209ENST00000466763 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
UBA3-209ENST00000466763 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
UBA3-209ENST00000466763 TMF1P82094 1093 aa19.45■□□□□ 0.7
UBA3-209ENST00000466763 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
UBA3-209ENST00000466763 SOS2Q07890 1332 aaPredicted RBP19.45■□□□□ 0.7
UBA3-209ENST00000466763 PPIP5K1Q6PFW1 1433 aa19.44■□□□□ 0.7
UBA3-209ENST00000466763 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
UBA3-209ENST00000466763 TMC1Q8TDI8 760 aa19.44■□□□□ 0.7
UBA3-209ENST00000466763 RNF39Q9H2S5 420 aa19.44■□□□□ 0.7
UBA3-209ENST00000466763 JCADQ9P266 1359 aa19.44■□□□□ 0.7
UBA3-209ENST00000466763 ACEP12821 1306 aa19.43■□□□□ 0.7
UBA3-209ENST00000466763 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
UBA3-209ENST00000466763 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
UBA3-209ENST00000466763 PLEKHG3A1L390 1219 aa19.41■□□□□ 0.7
UBA3-209ENST00000466763 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
UBA3-209ENST00000466763 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
UBA3-209ENST00000466763 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
UBA3-209ENST00000466763 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
UBA3-209ENST00000466763 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
UBA3-209ENST00000466763 PXDNQ92626 1479 aa19.4■□□□□ 0.7
UBA3-209ENST00000466763 TOPAZ1Q8N9V7 1692 aa19.4■□□□□ 0.7
UBA3-209ENST00000466763 DISP3Q9P2K9 1392 aa19.39■□□□□ 0.69
UBA3-209ENST00000466763 CDCA8Q53HL2 280 aa19.38■□□□□ 0.69
UBA3-209ENST00000466763 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
UBA3-209ENST00000466763 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
UBA3-209ENST00000466763 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
UBA3-209ENST00000466763 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
UBA3-209ENST00000466763 SLC12A5Q9H2X9 1139 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms