RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 ZMYM3Q14202 1370 aa9.92□□□□□ -0.82
TPM3-214ENST00000466010 FCHSD2O94868 740 aa9.92□□□□□ -0.82
TPM3-214ENST00000466010 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
TPM3-214ENST00000466010 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
TPM3-214ENST00000466010 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
TPM3-214ENST00000466010 PCMTD1Q96MG8 357 aaPredicted RBP9.92□□□□□ -0.82
TPM3-214ENST00000466010 C3P01024 1663 aa9.92□□□□□ -0.82
TPM3-214ENST00000466010 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
TPM3-214ENST00000466010 HSPA2P54652 639 aa9.91□□□□□ -0.82
TPM3-214ENST00000466010 GGT6Q6P531 493 aa9.91□□□□□ -0.82
TPM3-214ENST00000466010 ILDR1Q86SU0 546 aaPredicted RBP9.91□□□□□ -0.82
TPM3-214ENST00000466010 A6NJR5 290 aa9.9□□□□□ -0.82
TPM3-214ENST00000466010 TIE1P35590 1138 aa9.9□□□□□ -0.82
TPM3-214ENST00000466010 KANK4Q5T7N3 995 aaPredicted RBP9.9□□□□□ -0.82
TPM3-214ENST00000466010 NPM2Q86SE8 214 aaKnown RBP9.9□□□□□ -0.82
TPM3-214ENST00000466010 MAST1Q9Y2H9 1570 aa9.89□□□□□ -0.83
TPM3-214ENST00000466010 HRCP23327 699 aa9.89□□□□□ -0.83
TPM3-214ENST00000466010 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
TPM3-214ENST00000466010 KDM5DQ9BY66 1539 aa9.88□□□□□ -0.83
TPM3-214ENST00000466010 SHANK2Q9UPX8 1470 aa9.88□□□□□ -0.83
TPM3-214ENST00000466010 KIF3BO15066 747 aa9.88□□□□□ -0.83
TPM3-214ENST00000466010 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
TPM3-214ENST00000466010 FBXO41Q8TF61 875 aa9.88□□□□□ -0.83
TPM3-214ENST00000466010 MS4A3Q96HJ5 214 aa9.88□□□□□ -0.83
TPM3-214ENST00000466010 WASHC2CQ9Y4E1 1318 aa9.87□□□□□ -0.83
TPM3-214ENST00000466010 PTPRTO14522 1441 aa9.87□□□□□ -0.83
TPM3-214ENST00000466010 PTPRKQ15262 1439 aa9.87□□□□□ -0.83
TPM3-214ENST00000466010 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
TPM3-214ENST00000466010 ONECUT3O60422 494 aaPredicted RBP9.86□□□□□ -0.83
TPM3-214ENST00000466010 EIF2AK4Q9P2K8 1649 aaKnown RBP9.85□□□□□ -0.83
TPM3-214ENST00000466010 PZPP20742 1482 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 NCOA1Q15788 1441 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 FGD6Q6ZV73 1430 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 G3V3G9 751 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 TRAK2O60296 914 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 CCDC9Q9Y3X0 531 aaKnown RBP9.85□□□□□ -0.83
TPM3-214ENST00000466010 DUOX2Q9NRD8 1548 aa9.85□□□□□ -0.83
TPM3-214ENST00000466010 ERBINQ96RT1 1412 aa9.84□□□□□ -0.83
TPM3-214ENST00000466010 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
TPM3-214ENST00000466010 OSBPP22059 807 aa9.84□□□□□ -0.83
TPM3-214ENST00000466010 GIGYF2Q6Y7W6 1299 aaKnown RBP9.84□□□□□ -0.83
TPM3-214ENST00000466010 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
TPM3-214ENST00000466010 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.83
TPM3-214ENST00000466010 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
TPM3-214ENST00000466010 ZNF142P52746 1687 aaPredicted RBP9.83□□□□□ -0.84
TPM3-214ENST00000466010 RNF17Q9BXT8 1623 aaKnown RBP9.83□□□□□ -0.84
TPM3-214ENST00000466010 PTPN23Q9H3S7 1636 aa9.83□□□□□ -0.84
TPM3-214ENST00000466010 A2ML1A8K2U0 1454 aa9.83□□□□□ -0.84
TPM3-214ENST00000466010 CEP170BQ9Y4F5 1589 aaPredicted RBP9.83□□□□□ -0.84
TPM3-214ENST00000466010 ZC3H13Q5T200 1668 aaKnown RBP9.83□□□□□ -0.84
TPM3-214ENST00000466010 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 PTGER2P43116 358 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 CLUAP1Q96AJ1 413 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 TNRQ92752 1358 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 ANKRD30AQ9BXX3 1397 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 KIF15Q9NS87 1388 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 CAMSAP1Q5T5Y3 1602 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 ABCC5O15440 1437 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 DAPK1P53355 1430 aa9.82□□□□□ -0.84
TPM3-214ENST00000466010 STRCQ7RTU9 1775 aa9.81□□□□□ -0.84
TPM3-214ENST00000466010 TBC1D12O60347 775 aa9.81□□□□□ -0.84
TPM3-214ENST00000466010 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
TPM3-214ENST00000466010 DNMT1P26358 1616 aaKnown RBP9.81□□□□□ -0.84
TPM3-214ENST00000466010 CROCC2H7BZ55 1655 aa9.8□□□□□ -0.84
TPM3-214ENST00000466010 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
TPM3-214ENST00000466010 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
TPM3-214ENST00000466010 KANK1Q14678 1352 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 ABCC3O15438 1527 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 C2orf72A6NCS6 295 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 FECHP22830 423 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 MCM6Q14566 821 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
TPM3-214ENST00000466010 DDX12PQ92771 950 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
TPM3-214ENST00000466010 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
TPM3-214ENST00000466010 PRDM15P57071 1507 aaPredicted RBP9.78□□□□□ -0.84
TPM3-214ENST00000466010 RAD21O60216 631 aa9.78□□□□□ -0.84
TPM3-214ENST00000466010 MS4A1P11836 297 aa9.78□□□□□ -0.84
TPM3-214ENST00000466010 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
TPM3-214ENST00000466010 ARHGAP31Q2M1Z3 1444 aa9.78□□□□□ -0.84
TPM3-214ENST00000466010 CLCN1P35523 988 aa9.77□□□□□ -0.85
TPM3-214ENST00000466010 PTGDRQ13258 359 aa9.77□□□□□ -0.85
TPM3-214ENST00000466010 RRP7BPQ9NSQ0 103 aa9.77□□□□□ -0.85
TPM3-214ENST00000466010 ADGRL2O95490 1459 aa9.77□□□□□ -0.85
TPM3-214ENST00000466010 SPATA31D1Q6ZQQ2 1576 aa9.76□□□□□ -0.85
TPM3-214ENST00000466010 KIF3CO14782 793 aa9.76□□□□□ -0.85
TPM3-214ENST00000466010 FBXO31Q5XUX0 539 aaPredicted RBP9.76□□□□□ -0.85
TPM3-214ENST00000466010 PROSER2Q86WR7 435 aaPredicted RBP9.76□□□□□ -0.85
TPM3-214ENST00000466010 ANKLE2Q86XL3 938 aa9.76□□□□□ -0.85
TPM3-214ENST00000466010 CCDC97Q96F63 343 aaPredicted RBP9.76□□□□□ -0.85
TPM3-214ENST00000466010 BMP2KQ9NSY1 1161 aaPredicted RBP9.76□□□□□ -0.85
TPM3-214ENST00000466010 UGGT1Q9NYU2 1555 aa9.75□□□□□ -0.85
TPM3-214ENST00000466010 MROH1Q8NDA8 1641 aa9.75□□□□□ -0.85
TPM3-214ENST00000466010 FAM50AQ14320 339 aaKnown RBP9.75□□□□□ -0.85
TPM3-214ENST00000466010 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
TPM3-214ENST00000466010 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms