RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
NPHP3-203ENST00000465756 ESCO1Q5FWF5 840 aa15.2■□□□□ 0.02
NPHP3-203ENST00000465756 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
NPHP3-203ENST00000465756 STRCP1A6NGW2 1772 aa15.2■□□□□ 0.02
NPHP3-203ENST00000465756 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
NPHP3-203ENST00000465756 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
NPHP3-203ENST00000465756 CENPJQ9HC77 1338 aaPredicted RBP15.19■□□□□ 0.02
NPHP3-203ENST00000465756 SPATA31A6Q5VVP1 1343 aa15.18■□□□□ 0.02
NPHP3-203ENST00000465756 KIAA1210Q9ULL0 1709 aa15.18■□□□□ 0.02
NPHP3-203ENST00000465756 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
NPHP3-203ENST00000465756 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
NPHP3-203ENST00000465756 SAFB2Q14151 953 aaKnown RBP eCLIP15.18■□□□□ 0.02
NPHP3-203ENST00000465756 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
NPHP3-203ENST00000465756 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
NPHP3-203ENST00000465756 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
NPHP3-203ENST00000465756 EVC2Q86UK5 1308 aa15.16■□□□□ 0.02
NPHP3-203ENST00000465756 MINK1Q8N4C8 1332 aaPredicted RBP15.16■□□□□ 0.02
NPHP3-203ENST00000465756 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
NPHP3-203ENST00000465756 WAPLQ7Z5K2 1190 aa15.16■□□□□ 0.02
NPHP3-203ENST00000465756 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
NPHP3-203ENST00000465756 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
NPHP3-203ENST00000465756 MST1RQ04912 1400 aa15.15■□□□□ 0.02
NPHP3-203ENST00000465756 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
NPHP3-203ENST00000465756 C1orf167Q5SNV9 1468 aa15.15■□□□□ 0.02
NPHP3-203ENST00000465756 SRPK2P78362 688 aaKnown RBP15.15■□□□□ 0.02
NPHP3-203ENST00000465756 WASLO00401 505 aaPredicted RBP15.13■□□□□ 0.01
NPHP3-203ENST00000465756 ROBO1Q9Y6N7 1651 aa15.13■□□□□ 0.01
NPHP3-203ENST00000465756 SETD1AO15047 1707 aaKnown RBP15.11■□□□□ 0.01
NPHP3-203ENST00000465756 AHDC1Q5TGY3 1603 aaPredicted RBP15.11■□□□□ 0.01
NPHP3-203ENST00000465756 PHLPP1O60346 1717 aa15.11■□□□□ 0.01
NPHP3-203ENST00000465756 ASXL1Q8IXJ9 1541 aa15.1■□□□□ 0.01
NPHP3-203ENST00000465756 KIF1AQ12756 1690 aa15.1■□□□□ 0.01
NPHP3-203ENST00000465756 ARHGEF10O15013 1369 aa15.1■□□□□ 0.01
NPHP3-203ENST00000465756 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
NPHP3-203ENST00000465756 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
NPHP3-203ENST00000465756 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-203ENST00000465756 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
NPHP3-203ENST00000465756 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-203ENST00000465756 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0.01
NPHP3-203ENST00000465756 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0.01
NPHP3-203ENST00000465756 ATAD2Q6PL18 1390 aa15.08■□□□□ 0
NPHP3-203ENST00000465756 ADGRB1O14514 1584 aa15.07■□□□□ 0
NPHP3-203ENST00000465756 CDK19Q9BWU1 502 aa15.07■□□□□ 0
NPHP3-203ENST00000465756 NALCNQ8IZF0 1738 aa15.07■□□□□ 0
NPHP3-203ENST00000465756 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
NPHP3-203ENST00000465756 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
NPHP3-203ENST00000465756 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
NPHP3-203ENST00000465756 NUTM2BA6NNL0 878 aaPredicted RBP15.06■□□□□ 0
NPHP3-203ENST00000465756 NUTM2EB1AL46 878 aaPredicted RBP15.06■□□□□ 0
NPHP3-203ENST00000465756 FOXO3O43524 673 aa15.06■□□□□ 0
NPHP3-203ENST00000465756 NUTM2AQ8IVF1 878 aaPredicted RBP15.06■□□□□ 0
NPHP3-203ENST00000465756 NUDT16Q96DE0 195 aaKnown RBP15.06■□□□□ 0
NPHP3-203ENST00000465756 TULP4Q9NRJ4 1543 aa15.05■□□□□ 0
NPHP3-203ENST00000465756 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ -0
NPHP3-203ENST00000465756 ORAI2Q96SN7 254 aa15.05■□□□□ -0
NPHP3-203ENST00000465756 ADGRB2O60241 1585 aa15.05■□□□□ -0
NPHP3-203ENST00000465756 NBPF1Q3BBV0 1214 aa15.04■□□□□ -0
NPHP3-203ENST00000465756 SOS2Q07890 1332 aaPredicted RBP15.04■□□□□ -0
NPHP3-203ENST00000465756 TMF1P82094 1093 aa15.04■□□□□ -0
NPHP3-203ENST00000465756 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
NPHP3-203ENST00000465756 SBNO1A3KN83 1393 aa15.04■□□□□ -0
NPHP3-203ENST00000465756 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
NPHP3-203ENST00000465756 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
NPHP3-203ENST00000465756 TERF2IPQ9NYB0 399 aa15.03■□□□□ -0
NPHP3-203ENST00000465756 FMN2Q9NZ56 1722 aa15.02■□□□□ -0
NPHP3-203ENST00000465756 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
NPHP3-203ENST00000465756 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
NPHP3-203ENST00000465756 ITSN1Q15811 1721 aa15.01□□□□□ -0.01
NPHP3-203ENST00000465756 NINLQ9Y2I6 1382 aa15□□□□□ -0.01
NPHP3-203ENST00000465756 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
NPHP3-203ENST00000465756 MED1Q15648 1581 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-203ENST00000465756 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
NPHP3-203ENST00000465756 TRPM1Q7Z4N2 1603 aa14.99□□□□□ -0.01
NPHP3-203ENST00000465756 NLRP13Q86W25 1043 aa14.99□□□□□ -0.01
NPHP3-203ENST00000465756 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
NPHP3-203ENST00000465756 TNS3Q68CZ2 1445 aa14.98□□□□□ -0.01
NPHP3-203ENST00000465756 PLEKHG3A1L390 1219 aa14.98□□□□□ -0.01
NPHP3-203ENST00000465756 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPHP3-203ENST00000465756 TMC1Q8TDI8 760 aa14.98□□□□□ -0.01
NPHP3-203ENST00000465756 SPATA31A3Q5VYP0 1347 aa14.98□□□□□ -0.01
NPHP3-203ENST00000465756 ARHGEF28Q8N1W1 1705 aaKnown RBP14.98□□□□□ -0.01
NPHP3-203ENST00000465756 COL16A1Q07092 1604 aaPredicted RBP14.97□□□□□ -0.01
NPHP3-203ENST00000465756 ATP7BP35670 1465 aa14.97□□□□□ -0.01
NPHP3-203ENST00000465756 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
NPHP3-203ENST00000465756 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
NPHP3-203ENST00000465756 ADAMTS2O95450 1211 aa14.95□□□□□ -0.02
NPHP3-203ENST00000465756 C8orf37Q96NL8 207 aa14.95□□□□□ -0.02
NPHP3-203ENST00000465756 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
NPHP3-203ENST00000465756 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
NPHP3-203ENST00000465756 XPCQ01831 940 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-203ENST00000465756 USP47Q96K76 1375 aa14.94□□□□□ -0.02
NPHP3-203ENST00000465756 TTC21AQ8NDW8 1320 aa14.94□□□□□ -0.02
NPHP3-203ENST00000465756 TRPC5Q9UL62 973 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-203ENST00000465756 ACEP12821 1306 aa14.93□□□□□ -0.02
NPHP3-203ENST00000465756 QRICH2Q9H0J4 1663 aa14.93□□□□□ -0.02
NPHP3-203ENST00000465756 ABTB2Q8N961 1025 aa14.92□□□□□ -0.02
NPHP3-203ENST00000465756 KCNH5Q8NCM2 988 aa14.92□□□□□ -0.02
NPHP3-203ENST00000465756 CCDC9Q9Y3X0 531 aaKnown RBP14.92□□□□□ -0.02
NPHP3-203ENST00000465756 RXRBP28702 533 aa14.91□□□□□ -0.02
NPHP3-203ENST00000465756 PRDM11Q9NQV5 511 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms