RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 MARCH6O60337 910 aa8.81□□□□□ -1
SGCE-209ENST00000462731 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
SGCE-209ENST00000462731 PTGDRQ13258 359 aa8.8□□□□□ -1
SGCE-209ENST00000462731 PPP1R1BQ9UD71 204 aaPredicted RBP8.8□□□□□ -1
SGCE-209ENST00000462731 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
SGCE-209ENST00000462731 GIMAP6Q6P9H5 292 aa8.79□□□□□ -1
SGCE-209ENST00000462731 RIPOR2Q9Y4F9 1068 aa8.79□□□□□ -1
SGCE-209ENST00000462731 WASHC4Q2M389 1173 aa8.78□□□□□ -1
SGCE-209ENST00000462731 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
SGCE-209ENST00000462731 NOM1Q5C9Z4 860 aaKnown RBP8.78□□□□□ -1
SGCE-209ENST00000462731 ADGRD1Q6QNK2 874 aa8.78□□□□□ -1
SGCE-209ENST00000462731 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
SGCE-209ENST00000462731 LOC102724159A0A0B4J2E5 919 aa8.77□□□□□ -1.01
SGCE-209ENST00000462731 LMOD1P29536 600 aaPredicted RBP8.77□□□□□ -1.01
SGCE-209ENST00000462731 PWP2Q15269 919 aaKnown RBP8.77□□□□□ -1.01
SGCE-209ENST00000462731 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
SGCE-209ENST00000462731 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1.01
SGCE-209ENST00000462731 MICALL2Q8IY33 904 aa8.77□□□□□ -1.01
SGCE-209ENST00000462731 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
SGCE-209ENST00000462731 TMED8Q6PL24 325 aaPredicted RBP8.76□□□□□ -1.01
SGCE-209ENST00000462731 NOP9Q86U38 636 aaKnown RBP8.76□□□□□ -1.01
SGCE-209ENST00000462731 PRDM16Q9HAZ2 1276 aa8.76□□□□□ -1.01
SGCE-209ENST00000462731 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
SGCE-209ENST00000462731 MICAL1Q8TDZ2 1067 aa8.75□□□□□ -1.01
SGCE-209ENST00000462731 ZNF526Q8TF50 670 aaPredicted RBP8.75□□□□□ -1.01
SGCE-209ENST00000462731 PPME1Q9Y570 386 aa8.75□□□□□ -1.01
SGCE-209ENST00000462731 Q6ZNB5 142 aa8.74□□□□□ -1.01
SGCE-209ENST00000462731 DPH6Q7L8W6 267 aa8.74□□□□□ -1.01
SGCE-209ENST00000462731 RECKO95980 971 aa8.73□□□□□ -1.01
SGCE-209ENST00000462731 TUSC1Q2TAM9 212 aa8.73□□□□□ -1.01
SGCE-209ENST00000462731 NPAS4Q8IUM7 802 aa8.73□□□□□ -1.01
SGCE-209ENST00000462731 MYH16Q9H6N6 1097 aa8.73□□□□□ -1.01
SGCE-209ENST00000462731 ARID4AP29374 1257 aaPredicted RBP8.72□□□□□ -1.01
SGCE-209ENST00000462731 MARSP56192 900 aaKnown RBP8.72□□□□□ -1.01
SGCE-209ENST00000462731 ZNF662Q6ZS27 426 aa8.72□□□□□ -1.01
SGCE-209ENST00000462731 EXOC8Q8IYI6 725 aa8.72□□□□□ -1.01
SGCE-209ENST00000462731 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
SGCE-209ENST00000462731 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
SGCE-209ENST00000462731 NDUFB9Q9Y6M9 179 aa8.72□□□□□ -1.01
SGCE-209ENST00000462731 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
SGCE-209ENST00000462731 DSG2Q14126 1118 aa8.71□□□□□ -1.02
SGCE-209ENST00000462731 ELOAQ14241 798 aaKnown RBP8.71□□□□□ -1.02
SGCE-209ENST00000462731 PHOX2BQ99453 314 aa8.71□□□□□ -1.02
SGCE-209ENST00000462731 ALG2Q9H553 416 aa8.7□□□□□ -1.02
SGCE-209ENST00000462731 TFIP11Q9UBB9 837 aaKnown RBP8.7□□□□□ -1.02
SGCE-209ENST00000462731 LIMD1Q9UGP4 676 aa8.7□□□□□ -1.02
SGCE-209ENST00000462731 SUGT1Q9Y2Z0 365 aa8.7□□□□□ -1.02
SGCE-209ENST00000462731 A0A0G2JS52 829 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 ANKRD33BA6NCL7 494 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 HRO43593 1189 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 RAB11FIP3O75154 756 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 NUDT7P0C024 238 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 CCDC181Q5TID7 509 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 PHLDB3Q6NSJ2 640 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
SGCE-209ENST00000462731 METTL14Q9HCE5 456 aaKnown RBP8.69□□□□□ -1.02
SGCE-209ENST00000462731 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
SGCE-209ENST00000462731 GORABQ5T7V8 394 aa8.68□□□□□ -1.02
SGCE-209ENST00000462731 BCL11AQ9H165 835 aa8.68□□□□□ -1.02
SGCE-209ENST00000462731 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
SGCE-209ENST00000462731 LHX6Q9UPM6 363 aa8.68□□□□□ -1.02
SGCE-209ENST00000462731 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
SGCE-209ENST00000462731 TPD52L2O43399 206 aaKnown RBP8.67□□□□□ -1.02
SGCE-209ENST00000462731 NEFLP07196 543 aa8.67□□□□□ -1.02
SGCE-209ENST00000462731 FOXK1P85037 733 aa8.67□□□□□ -1.02
SGCE-209ENST00000462731 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
SGCE-209ENST00000462731 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
SGCE-209ENST00000462731 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
SGCE-209ENST00000462731 TK2O00142 265 aa8.66□□□□□ -1.02
SGCE-209ENST00000462731 ERCC5P28715 1186 aaPredicted RBP8.66□□□□□ -1.02
SGCE-209ENST00000462731 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
SGCE-209ENST00000462731 SOX11P35716 441 aa8.65□□□□□ -1.02
SGCE-209ENST00000462731 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
SGCE-209ENST00000462731 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
SGCE-209ENST00000462731 GJD4Q96KN9 370 aaPredicted RBP8.65□□□□□ -1.02
SGCE-209ENST00000462731 PRIM1P49642 420 aaKnown RBP8.64□□□□□ -1.03
SGCE-209ENST00000462731 TMEM164Q5U3C3 297 aa8.64□□□□□ -1.03
SGCE-209ENST00000462731 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
SGCE-209ENST00000462731 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
SGCE-209ENST00000462731 TLDC2A0PJX2 215 aa8.63□□□□□ -1.03
SGCE-209ENST00000462731 AP1G2O75843 785 aa8.63□□□□□ -1.03
SGCE-209ENST00000462731 SSFA2P28290 1259 aa8.63□□□□□ -1.03
SGCE-209ENST00000462731 DDX12PQ92771 950 aa8.63□□□□□ -1.03
SGCE-209ENST00000462731 LNPKQ9C0E8 428 aa8.63□□□□□ -1.03
SGCE-209ENST00000462731 SBNO2Q9Y2G9 1366 aa8.62□□□□□ -1.03
SGCE-209ENST00000462731 SPTLC1O15269 473 aa8.62□□□□□ -1.03
SGCE-209ENST00000462731 PTPN5P54829 565 aa8.62□□□□□ -1.03
SGCE-209ENST00000462731 VAC14Q08AM6 782 aa8.62□□□□□ -1.03
SGCE-209ENST00000462731 ZMIZ1Q9ULJ6 1067 aa8.62□□□□□ -1.03
SGCE-209ENST00000462731 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.62□□□□□ -1.03
SGCE-209ENST00000462731 GPR37L1O60883 481 aa8.61□□□□□ -1.03
SGCE-209ENST00000462731 TSNAXIP1Q2TAA8 658 aa8.61□□□□□ -1.03
SGCE-209ENST00000462731 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
SGCE-209ENST00000462731 SLC52A1Q9NWF4 448 aa8.61□□□□□ -1.03
SGCE-209ENST00000462731 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
SGCE-209ENST00000462731 EGFLAMQ63HQ2 1017 aa8.6□□□□□ -1.03
SGCE-209ENST00000462731 STK32AQ8WU08 396 aa8.6□□□□□ -1.03
SGCE-209ENST00000462731 STAC3Q96MF2 364 aa8.6□□□□□ -1.03
SGCE-209ENST00000462731 TANGO6Q9C0B7 1094 aa8.6□□□□□ -1.03
SGCE-209ENST00000462731 MAGEC2Q9UBF1 373 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms