RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 DCAF11Q8TEB1 546 aa23.61■■□□□ 1.37
SNX21-206ENST00000462307 SPATA31A6Q5VVP1 1343 aa23.59■■□□□ 1.37
SNX21-206ENST00000462307 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
SNX21-206ENST00000462307 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
SNX21-206ENST00000462307 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
SNX21-206ENST00000462307 ORAI2Q96SN7 254 aa23.58■■□□□ 1.37
SNX21-206ENST00000462307 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
SNX21-206ENST00000462307 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
SNX21-206ENST00000462307 DDX17Q92841 729 aaKnown RBP23.55■■□□□ 1.36
SNX21-206ENST00000462307 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
SNX21-206ENST00000462307 SOS2Q07890 1332 aaPredicted RBP23.53■■□□□ 1.36
SNX21-206ENST00000462307 DLC1Q96QB1 1528 aa23.53■■□□□ 1.36
SNX21-206ENST00000462307 LRP6O75581 1613 aa23.5■■□□□ 1.35
SNX21-206ENST00000462307 ESCO1Q5FWF5 840 aa23.49■■□□□ 1.35
SNX21-206ENST00000462307 PRAM1Q96QH2 718 aa23.49■■□□□ 1.35
SNX21-206ENST00000462307 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
SNX21-206ENST00000462307 POTEAQ6S8J7 498 aa23.47■■□□□ 1.35
SNX21-206ENST00000462307 PNPLA6Q8IY17 1366 aa23.46■■□□□ 1.35
SNX21-206ENST00000462307 NPHP3Q7Z494 1330 aa23.45■■□□□ 1.34
SNX21-206ENST00000462307 TRAK1Q9UPV9 953 aa23.45■■□□□ 1.34
SNX21-206ENST00000462307 POGKQ9P215 609 aa23.44■■□□□ 1.34
SNX21-206ENST00000462307 RGPD8O14715 1765 aaPredicted RBP23.44■■□□□ 1.34
SNX21-206ENST00000462307 KIAA1210Q9ULL0 1709 aa23.43■■□□□ 1.34
SNX21-206ENST00000462307 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
SNX21-206ENST00000462307 FOXO3O43524 673 aa23.42■■□□□ 1.34
SNX21-206ENST00000462307 SAFB2Q14151 953 aaKnown RBP eCLIP23.42■■□□□ 1.34
SNX21-206ENST00000462307 PXDNQ92626 1479 aa23.41■■□□□ 1.34
SNX21-206ENST00000462307 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
SNX21-206ENST00000462307 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
SNX21-206ENST00000462307 MEX3CQ5U5Q3 659 aaKnown RBP23.4■■□□□ 1.34
SNX21-206ENST00000462307 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
SNX21-206ENST00000462307 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
SNX21-206ENST00000462307 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
SNX21-206ENST00000462307 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
SNX21-206ENST00000462307 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
SNX21-206ENST00000462307 SIN3AQ96ST3 1273 aa23.37■■□□□ 1.33
SNX21-206ENST00000462307 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
SNX21-206ENST00000462307 L3MBTL2Q969R5 705 aa23.36■■□□□ 1.33
SNX21-206ENST00000462307 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
SNX21-206ENST00000462307 ANKARQ7Z5J8 1434 aa23.35■■□□□ 1.33
SNX21-206ENST00000462307 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
SNX21-206ENST00000462307 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
SNX21-206ENST00000462307 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
SNX21-206ENST00000462307 WASLO00401 505 aaPredicted RBP23.33■■□□□ 1.33
SNX21-206ENST00000462307 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.32
SNX21-206ENST00000462307 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
SNX21-206ENST00000462307 KRT28Q7Z3Y7 464 aa23.32■■□□□ 1.32
SNX21-206ENST00000462307 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
SNX21-206ENST00000462307 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
SNX21-206ENST00000462307 AFF2P51816 1311 aa23.3■■□□□ 1.32
SNX21-206ENST00000462307 EIF3AQ14152 1382 aaKnown RBP23.29■■□□□ 1.32
SNX21-206ENST00000462307 PRR36Q9H6K5 1346 aa23.29■■□□□ 1.32
SNX21-206ENST00000462307 PSME1Q06323 249 aa23.28■■□□□ 1.32
SNX21-206ENST00000462307 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
SNX21-206ENST00000462307 C8orf37Q96NL8 207 aa23.28■■□□□ 1.32
SNX21-206ENST00000462307 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
SNX21-206ENST00000462307 ADAMTS2O95450 1211 aa23.26■■□□□ 1.31
SNX21-206ENST00000462307 SBNO1A3KN83 1393 aa23.26■■□□□ 1.31
SNX21-206ENST00000462307 FNBP4Q8N3X1 1017 aaPredicted RBP23.25■■□□□ 1.31
SNX21-206ENST00000462307 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
SNX21-206ENST00000462307 NGLY1Q96IV0 654 aa23.24■■□□□ 1.31
SNX21-206ENST00000462307 MARF1Q9Y4F3 1742 aaKnown RBP23.23■■□□□ 1.31
SNX21-206ENST00000462307 RXRBP28702 533 aa23.23■■□□□ 1.31
SNX21-206ENST00000462307 CDK19Q9BWU1 502 aa23.22■■□□□ 1.31
SNX21-206ENST00000462307 QTRT2Q9H974 415 aaKnown RBP23.22■■□□□ 1.31
SNX21-206ENST00000462307 NUDT16Q96DE0 195 aaKnown RBP23.21■■□□□ 1.31
SNX21-206ENST00000462307 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
SNX21-206ENST00000462307 TRPM1Q7Z4N2 1603 aa23.21■■□□□ 1.31
SNX21-206ENST00000462307 ATP7BP35670 1465 aa23.19■■□□□ 1.3
SNX21-206ENST00000462307 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
SNX21-206ENST00000462307 CDK12Q9NYV4 1490 aaPredicted RBP23.18■■□□□ 1.3
SNX21-206ENST00000462307 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
SNX21-206ENST00000462307 ARHGEF10O15013 1369 aa23.17■■□□□ 1.3
SNX21-206ENST00000462307 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
SNX21-206ENST00000462307 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
SNX21-206ENST00000462307 USP21Q9UK80 565 aa23.17■■□□□ 1.3
SNX21-206ENST00000462307 GPRASP1Q5JY77 1395 aa23.16■■□□□ 1.3
SNX21-206ENST00000462307 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
SNX21-206ENST00000462307 CCDC61Q9Y6R9 512 aa23.16■■□□□ 1.3
SNX21-206ENST00000462307 ALS2Q96Q42 1657 aa23.14■■□□□ 1.29
SNX21-206ENST00000462307 BCL9LQ86UU0 1499 aa23.14■■□□□ 1.29
SNX21-206ENST00000462307 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
SNX21-206ENST00000462307 NGDNQ8NEJ9 315 aaKnown RBP23.14■■□□□ 1.29
SNX21-206ENST00000462307 TRPC5Q9UL62 973 aaPredicted RBP23.14■■□□□ 1.29
SNX21-206ENST00000462307 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
SNX21-206ENST00000462307 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
SNX21-206ENST00000462307 ROCK2O75116 1388 aaKnown RBP23.12■■□□□ 1.29
SNX21-206ENST00000462307 ATRNO75882 1429 aa23.11■■□□□ 1.29
SNX21-206ENST00000462307 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
SNX21-206ENST00000462307 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
SNX21-206ENST00000462307 SLIT2O94813 1529 aa23.1■■□□□ 1.29
SNX21-206ENST00000462307 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
SNX21-206ENST00000462307 ABCA3Q99758 1704 aa23.09■■□□□ 1.29
SNX21-206ENST00000462307 ACEP12821 1306 aa23.08■■□□□ 1.29
SNX21-206ENST00000462307 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.08■■□□□ 1.29
SNX21-206ENST00000462307 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
SNX21-206ENST00000462307 UNC5CLQ8IV45 518 aa23.07■■□□□ 1.28
SNX21-206ENST00000462307 SRPK2P78362 688 aaKnown RBP23.06■■□□□ 1.28
SNX21-206ENST00000462307 CABP2Q9NPB3 220 aa23.06■■□□□ 1.28
SNX21-206ENST00000462307 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms