RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 LAMC1P11047 1609 aa34.67■■■■□ 3.14
LMBR1-214ENST00000461469 CDC42BPGQ6DT37 1551 aa34.66■■■■□ 3.14
LMBR1-214ENST00000461469 ORAI2Q96SN7 254 aa34.64■■■■□ 3.14
LMBR1-214ENST00000461469 DHX57Q6P158 1386 aaKnown RBP34.62■■■■□ 3.13
LMBR1-214ENST00000461469 ADGRB1O14514 1584 aa34.59■■■■□ 3.13
LMBR1-214ENST00000461469 KDM2AQ9Y2K7 1162 aa34.58■■■■□ 3.13
LMBR1-214ENST00000461469 DCAF11Q8TEB1 546 aa34.57■■■■□ 3.12
LMBR1-214ENST00000461469 SPATA31A6Q5VVP1 1343 aa34.56■■■■□ 3.12
LMBR1-214ENST00000461469 POTEAQ6S8J7 498 aa34.55■■■■□ 3.12
LMBR1-214ENST00000461469 FMN2Q9NZ56 1722 aa34.54■■■■□ 3.12
LMBR1-214ENST00000461469 NUTM2FA1L443 756 aa34.5■■■■□ 3.11
LMBR1-214ENST00000461469 SIRT1Q96EB6 747 aa34.5■■■■□ 3.11
LMBR1-214ENST00000461469 PNPLA6Q8IY17 1366 aa34.49■■■■□ 3.11
LMBR1-214ENST00000461469 LRRC59Q96AG4 307 aaKnown RBP34.48■■■■□ 3.11
LMBR1-214ENST00000461469 DLC1Q96QB1 1528 aa34.48■■■■□ 3.11
LMBR1-214ENST00000461469 SOS2Q07890 1332 aaPredicted RBP34.48■■■■□ 3.11
LMBR1-214ENST00000461469 RGPD8O14715 1765 aaPredicted RBP34.47■■■■□ 3.11
LMBR1-214ENST00000461469 NUTM2BA6NNL0 878 aaPredicted RBP34.46■■■■□ 3.11
LMBR1-214ENST00000461469 NUTM2EB1AL46 878 aaPredicted RBP34.46■■■■□ 3.11
LMBR1-214ENST00000461469 NUTM2AQ8IVF1 878 aaPredicted RBP34.46■■■■□ 3.11
LMBR1-214ENST00000461469 PRAM1Q96QH2 718 aa34.46■■■■□ 3.11
LMBR1-214ENST00000461469 ESCO1Q5FWF5 840 aa34.45■■■■□ 3.11
LMBR1-214ENST00000461469 SAFB2Q14151 953 aaKnown RBP eCLIP34.44■■■■□ 3.1
LMBR1-214ENST00000461469 PXDNQ92626 1479 aa34.41■■■■□ 3.1
LMBR1-214ENST00000461469 MEX3CQ5U5Q3 659 aaKnown RBP34.4■■■■□ 3.1
LMBR1-214ENST00000461469 TRAK1Q9UPV9 953 aa34.4■■■■□ 3.1
LMBR1-214ENST00000461469 FOXO3O43524 673 aa34.37■■■■□ 3.09
LMBR1-214ENST00000461469 XPCQ01831 940 aaPredicted RBP34.37■■■■□ 3.09
LMBR1-214ENST00000461469 STAC3Q96MF2 364 aa34.37■■■■□ 3.09
LMBR1-214ENST00000461469 USP32Q8NFA0 1604 aa34.37■■■■□ 3.09
LMBR1-214ENST00000461469 ADGRB2O60241 1585 aa34.36■■■■□ 3.09
LMBR1-214ENST00000461469 ARHGEF28Q8N1W1 1705 aaKnown RBP34.35■■■■□ 3.09
LMBR1-214ENST00000461469 COL22A1Q8NFW1 1626 aaPredicted RBP34.33■■■■□ 3.09
LMBR1-214ENST00000461469 NPHP3Q7Z494 1330 aa34.33■■■■□ 3.09
LMBR1-214ENST00000461469 POGKQ9P215 609 aa34.33■■■■□ 3.09
LMBR1-214ENST00000461469 KIF1AQ12756 1690 aa34.33■■■■□ 3.09
LMBR1-214ENST00000461469 KIAA1210Q9ULL0 1709 aa34.3■■■■□ 3.08
LMBR1-214ENST00000461469 HIRIP3Q9BW71 556 aaPredicted RBP34.29■■■■□ 3.08
LMBR1-214ENST00000461469 SIN3AQ96ST3 1273 aa34.28■■■■□ 3.08
LMBR1-214ENST00000461469 MINK1Q8N4C8 1332 aaPredicted RBP34.27■■■■□ 3.08
LMBR1-214ENST00000461469 AFF2P51816 1311 aa34.26■■■■□ 3.07
LMBR1-214ENST00000461469 C8orf37Q96NL8 207 aa34.24■■■■□ 3.07
LMBR1-214ENST00000461469 ADAMTS2O95450 1211 aa34.23■■■■□ 3.07
LMBR1-214ENST00000461469 NBPF1Q3BBV0 1214 aa34.23■■■■□ 3.07
LMBR1-214ENST00000461469 ZNF772Q68DY9 489 aaPredicted RBP34.23■■■■□ 3.07
LMBR1-214ENST00000461469 PHF8Q9UPP1 1060 aa34.22■■■■□ 3.07
LMBR1-214ENST00000461469 PRR36Q9H6K5 1346 aa34.22■■■■□ 3.07
LMBR1-214ENST00000461469 ANKARQ7Z5J8 1434 aa34.21■■■■□ 3.07
LMBR1-214ENST00000461469 L3MBTL2Q969R5 705 aa34.19■■■■□ 3.06
LMBR1-214ENST00000461469 KRT28Q7Z3Y7 464 aa34.18■■■■□ 3.06
LMBR1-214ENST00000461469 SPATA31A3Q5VYP0 1347 aa34.17■■■■□ 3.06
LMBR1-214ENST00000461469 TULP4Q9NRJ4 1543 aa34.17■■■■□ 3.06
LMBR1-214ENST00000461469 MARF1Q9Y4F3 1742 aaKnown RBP34.16■■■■□ 3.06
LMBR1-214ENST00000461469 WASLO00401 505 aaPredicted RBP34.15■■■■□ 3.06
LMBR1-214ENST00000461469 PMFBP1Q8TBY8 1022 aa34.15■■■■□ 3.06
LMBR1-214ENST00000461469 NEUROD1Q13562 356 aa34.13■■■■□ 3.05
LMBR1-214ENST00000461469 NGLY1Q96IV0 654 aa34.11■■■■□ 3.05
LMBR1-214ENST00000461469 TRPM3Q9HCF6 1732 aaPredicted RBP34.1■■■■□ 3.05
LMBR1-214ENST00000461469 TNS3Q68CZ2 1445 aa34.09■■■■□ 3.05
LMBR1-214ENST00000461469 TRPM1Q7Z4N2 1603 aa34.08■■■■□ 3.05
LMBR1-214ENST00000461469 ATP7BP35670 1465 aa34.07■■■■□ 3.05
LMBR1-214ENST00000461469 RXRBP28702 533 aa34.06■■■■□ 3.04
LMBR1-214ENST00000461469 ABCA3Q99758 1704 aa34.06■■■■□ 3.04
LMBR1-214ENST00000461469 QTRT2Q9H974 415 aaKnown RBP34.05■■■■□ 3.04
LMBR1-214ENST00000461469 SBNO1A3KN83 1393 aa34.05■■■■□ 3.04
LMBR1-214ENST00000461469 EIF3AQ14152 1382 aaKnown RBP34.04■■■■□ 3.04
LMBR1-214ENST00000461469 TRIM26Q12899 539 aaPredicted RBP34.04■■■■□ 3.04
LMBR1-214ENST00000461469 FNBP4Q8N3X1 1017 aaPredicted RBP34.04■■■■□ 3.04
LMBR1-214ENST00000461469 PSME1Q06323 249 aa34.03■■■■□ 3.04
LMBR1-214ENST00000461469 ITSN1Q15811 1721 aa34.02■■■■□ 3.04
LMBR1-214ENST00000461469 TOPAZ1Q8N9V7 1692 aa34.02■■■■□ 3.04
LMBR1-214ENST00000461469 ALS2Q96Q42 1657 aa34.02■■■■□ 3.04
LMBR1-214ENST00000461469 CABLES1Q8TDN4 633 aa34.01■■■■□ 3.03
LMBR1-214ENST00000461469 USP21Q9UK80 565 aa34.01■■■■□ 3.03
LMBR1-214ENST00000461469 CDK12Q9NYV4 1490 aaPredicted RBP34.01■■■■□ 3.03
LMBR1-214ENST00000461469 CDK19Q9BWU1 502 aa34■■■■□ 3.03
LMBR1-214ENST00000461469 BCL9LQ86UU0 1499 aa34■■■■□ 3.03
LMBR1-214ENST00000461469 QRICH2Q9H0J4 1663 aa33.99■■■■□ 3.03
LMBR1-214ENST00000461469 RGS12O14924 1447 aa33.99■■■■□ 3.03
LMBR1-214ENST00000461469 PLEKHG5O94827 1062 aa33.99■■■■□ 3.03
LMBR1-214ENST00000461469 NUDT16Q96DE0 195 aaKnown RBP33.99■■■■□ 3.03
LMBR1-214ENST00000461469 ATRNO75882 1429 aa33.96■■■■□ 3.03
LMBR1-214ENST00000461469 RBM6P78332 1123 aaKnown RBP33.96■■■■□ 3.03
LMBR1-214ENST00000461469 NBPF8Q3BBV2 869 aa33.96■■■■□ 3.03
LMBR1-214ENST00000461469 LMOD2Q6P5Q4 547 aa33.95■■■■□ 3.03
LMBR1-214ENST00000461469 CENPJQ9HC77 1338 aaPredicted RBP33.94■■■■□ 3.02
LMBR1-214ENST00000461469 ARHGEF10O15013 1369 aa33.93■■■■□ 3.02
LMBR1-214ENST00000461469 CRYBG1Q9Y4K1 1723 aa33.93■■■■□ 3.02
LMBR1-214ENST00000461469 GPRASP1Q5JY77 1395 aa33.92■■■■□ 3.02
LMBR1-214ENST00000461469 SLIT2O94813 1529 aa33.92■■■■□ 3.02
LMBR1-214ENST00000461469 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.92■■■■□ 3.02
LMBR1-214ENST00000461469 NGDNQ8NEJ9 315 aaKnown RBP33.91■■■■□ 3.02
LMBR1-214ENST00000461469 TRPC5Q9UL62 973 aaPredicted RBP33.9■■■■□ 3.02
LMBR1-214ENST00000461469 PLCH1Q4KWH8 1693 aa33.89■■■■□ 3.02
LMBR1-214ENST00000461469 ROCK2O75116 1388 aaKnown RBP33.86■■■■□ 3.01
LMBR1-214ENST00000461469 POLR3AO14802 1390 aaPredicted RBP33.85■■■■□ 3.01
LMBR1-214ENST00000461469 CABP2Q9NPB3 220 aa33.84■■■■□ 3.01
LMBR1-214ENST00000461469 CCDC61Q9Y6R9 512 aa33.84■■■■□ 3.01
LMBR1-214ENST00000461469 HAP1P54257 671 aaPredicted RBP33.83■■■■□ 3.01
LMBR1-214ENST00000461469 ACEP12821 1306 aa33.82■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms