RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 DHX57Q6P158 1386 aaKnown RBP25.92■■□□□ 1.74
COL13A1-206ENST00000456019 SIRT1Q96EB6 747 aa25.91■■□□□ 1.74
COL13A1-206ENST00000456019 LRRC59Q96AG4 307 aaKnown RBP25.9■■□□□ 1.74
COL13A1-206ENST00000456019 DDX17Q92841 729 aaKnown RBP25.89■■□□□ 1.74
COL13A1-206ENST00000456019 STAC3Q96MF2 364 aa25.89■■□□□ 1.74
COL13A1-206ENST00000456019 PLEKHH1Q9ULM0 1364 aa25.88■■□□□ 1.73
COL13A1-206ENST00000456019 DCAF11Q8TEB1 546 aa25.88■■□□□ 1.73
COL13A1-206ENST00000456019 ORAI2Q96SN7 254 aa25.88■■□□□ 1.73
COL13A1-206ENST00000456019 LRP6O75581 1613 aa25.87■■□□□ 1.73
COL13A1-206ENST00000456019 KDM2AQ9Y2K7 1162 aa25.86■■□□□ 1.73
COL13A1-206ENST00000456019 MEX3CQ5U5Q3 659 aaKnown RBP25.85■■□□□ 1.73
COL13A1-206ENST00000456019 ESCO1Q5FWF5 840 aa25.83■■□□□ 1.73
COL13A1-206ENST00000456019 POTEAQ6S8J7 498 aa25.82■■□□□ 1.72
COL13A1-206ENST00000456019 SOS2Q07890 1332 aaPredicted RBP25.82■■□□□ 1.72
COL13A1-206ENST00000456019 NUTM2BA6NNL0 878 aaPredicted RBP25.81■■□□□ 1.72
COL13A1-206ENST00000456019 NUTM2EB1AL46 878 aaPredicted RBP25.81■■□□□ 1.72
COL13A1-206ENST00000456019 NUTM2AQ8IVF1 878 aaPredicted RBP25.81■■□□□ 1.72
COL13A1-206ENST00000456019 PNPLA6Q8IY17 1366 aa25.81■■□□□ 1.72
COL13A1-206ENST00000456019 DLC1Q96QB1 1528 aa25.8■■□□□ 1.72
COL13A1-206ENST00000456019 ADGRB1O14514 1584 aa25.8■■□□□ 1.72
COL13A1-206ENST00000456019 PRAM1Q96QH2 718 aa25.79■■□□□ 1.72
COL13A1-206ENST00000456019 NUTM2FA1L443 756 aa25.78■■□□□ 1.72
COL13A1-206ENST00000456019 NPHP3Q7Z494 1330 aa25.78■■□□□ 1.72
COL13A1-206ENST00000456019 FMN2Q9NZ56 1722 aa25.77■■□□□ 1.72
COL13A1-206ENST00000456019 POGKQ9P215 609 aa25.77■■□□□ 1.72
COL13A1-206ENST00000456019 ZNF772Q68DY9 489 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-206ENST00000456019 SAFB2Q14151 953 aaKnown RBP eCLIP25.74■■□□□ 1.71
COL13A1-206ENST00000456019 TRAK1Q9UPV9 953 aa25.74■■□□□ 1.71
COL13A1-206ENST00000456019 FOXO3O43524 673 aa25.73■■□□□ 1.71
COL13A1-206ENST00000456019 PXDNQ92626 1479 aa25.71■■□□□ 1.71
COL13A1-206ENST00000456019 KIF1AQ12756 1690 aa25.7■■□□□ 1.7
COL13A1-206ENST00000456019 ADGRB2O60241 1585 aa25.68■■□□□ 1.7
COL13A1-206ENST00000456019 XPCQ01831 940 aaPredicted RBP25.67■■□□□ 1.7
COL13A1-206ENST00000456019 AFF2P51816 1311 aa25.66■■□□□ 1.7
COL13A1-206ENST00000456019 C8orf37Q96NL8 207 aa25.66■■□□□ 1.7
COL13A1-206ENST00000456019 COL22A1Q8NFW1 1626 aaPredicted RBP25.66■■□□□ 1.7
COL13A1-206ENST00000456019 PHF8Q9UPP1 1060 aa25.65■■□□□ 1.7
COL13A1-206ENST00000456019 ANKARQ7Z5J8 1434 aa25.64■■□□□ 1.7
COL13A1-206ENST00000456019 ADAMTS2O95450 1211 aa25.64■■□□□ 1.7
COL13A1-206ENST00000456019 HIRIP3Q9BW71 556 aaPredicted RBP25.63■■□□□ 1.69
COL13A1-206ENST00000456019 KIAA1210Q9ULL0 1709 aa25.63■■□□□ 1.69
COL13A1-206ENST00000456019 MINK1Q8N4C8 1332 aaPredicted RBP25.63■■□□□ 1.69
COL13A1-206ENST00000456019 RGPD8O14715 1765 aaPredicted RBP25.61■■□□□ 1.69
COL13A1-206ENST00000456019 EIF3AQ14152 1382 aaKnown RBP25.61■■□□□ 1.69
COL13A1-206ENST00000456019 KRT28Q7Z3Y7 464 aa25.61■■□□□ 1.69
COL13A1-206ENST00000456019 NGLY1Q96IV0 654 aa25.6■■□□□ 1.69
COL13A1-206ENST00000456019 ARHGEF28Q8N1W1 1705 aaKnown RBP25.6■■□□□ 1.69
COL13A1-206ENST00000456019 RXRBP28702 533 aa25.59■■□□□ 1.69
COL13A1-206ENST00000456019 SPATA31A3Q5VYP0 1347 aa25.59■■□□□ 1.69
COL13A1-206ENST00000456019 USP32Q8NFA0 1604 aa25.59■■□□□ 1.69
COL13A1-206ENST00000456019 WASLO00401 505 aaPredicted RBP25.58■■□□□ 1.69
COL13A1-206ENST00000456019 PSME1Q06323 249 aa25.58■■□□□ 1.69
COL13A1-206ENST00000456019 TULP4Q9NRJ4 1543 aa25.57■■□□□ 1.68
COL13A1-206ENST00000456019 SIN3AQ96ST3 1273 aa25.56■■□□□ 1.68
COL13A1-206ENST00000456019 L3MBTL2Q969R5 705 aa25.55■■□□□ 1.68
COL13A1-206ENST00000456019 NBPF1Q3BBV0 1214 aa25.54■■□□□ 1.68
COL13A1-206ENST00000456019 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
COL13A1-206ENST00000456019 QTRT2Q9H974 415 aaKnown RBP25.54■■□□□ 1.68
COL13A1-206ENST00000456019 SBNO1A3KN83 1393 aa25.54■■□□□ 1.68
COL13A1-206ENST00000456019 TNS3Q68CZ2 1445 aa25.54■■□□□ 1.68
COL13A1-206ENST00000456019 PRR36Q9H6K5 1346 aa25.53■■□□□ 1.68
COL13A1-206ENST00000456019 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
COL13A1-206ENST00000456019 CDK12Q9NYV4 1490 aaPredicted RBP25.52■■□□□ 1.68
COL13A1-206ENST00000456019 FNBP4Q8N3X1 1017 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-206ENST00000456019 USP21Q9UK80 565 aa25.51■■□□□ 1.67
COL13A1-206ENST00000456019 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
COL13A1-206ENST00000456019 RBM6P78332 1123 aaKnown RBP25.49■■□□□ 1.67
COL13A1-206ENST00000456019 ARHGEF10O15013 1369 aa25.48■■□□□ 1.67
COL13A1-206ENST00000456019 MARF1Q9Y4F3 1742 aaKnown RBP25.48■■□□□ 1.67
COL13A1-206ENST00000456019 GPRASP1Q5JY77 1395 aa25.47■■□□□ 1.67
COL13A1-206ENST00000456019 LMOD2Q6P5Q4 547 aa25.46■■□□□ 1.67
COL13A1-206ENST00000456019 TRPC5Q9UL62 973 aaPredicted RBP25.46■■□□□ 1.67
COL13A1-206ENST00000456019 ATP7BP35670 1465 aa25.46■■□□□ 1.67
COL13A1-206ENST00000456019 NUDT16Q96DE0 195 aaKnown RBP25.45■■□□□ 1.66
COL13A1-206ENST00000456019 CDK19Q9BWU1 502 aa25.45■■□□□ 1.66
COL13A1-206ENST00000456019 ITSN1Q15811 1721 aa25.44■■□□□ 1.66
COL13A1-206ENST00000456019 HAP1P54257 671 aaPredicted RBP25.44■■□□□ 1.66
COL13A1-206ENST00000456019 NGDNQ8NEJ9 315 aaKnown RBP25.44■■□□□ 1.66
COL13A1-206ENST00000456019 CENPJQ9HC77 1338 aaPredicted RBP25.43■■□□□ 1.66
COL13A1-206ENST00000456019 ATRNO75882 1429 aa25.42■■□□□ 1.66
COL13A1-206ENST00000456019 TRPM3Q9HCF6 1732 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-206ENST00000456019 BCL9LQ86UU0 1499 aa25.41■■□□□ 1.66
COL13A1-206ENST00000456019 TRPM1Q7Z4N2 1603 aa25.41■■□□□ 1.66
COL13A1-206ENST00000456019 RGS12O14924 1447 aa25.4■■□□□ 1.66
COL13A1-206ENST00000456019 CABLES1Q8TDN4 633 aa25.4■■□□□ 1.66
COL13A1-206ENST00000456019 PLEKHG5O94827 1062 aa25.38■■□□□ 1.65
COL13A1-206ENST00000456019 CCDC61Q9Y6R9 512 aa25.38■■□□□ 1.65
COL13A1-206ENST00000456019 SLIT2O94813 1529 aa25.37■■□□□ 1.65
COL13A1-206ENST00000456019 ALS2Q96Q42 1657 aa25.37■■□□□ 1.65
COL13A1-206ENST00000456019 ROCK2O75116 1388 aaKnown RBP25.37■■□□□ 1.65
COL13A1-206ENST00000456019 ABCA3Q99758 1704 aa25.36■■□□□ 1.65
COL13A1-206ENST00000456019 TOPAZ1Q8N9V7 1692 aa25.36■■□□□ 1.65
COL13A1-206ENST00000456019 PAK3O75914 559 aaPredicted RBP25.35■■□□□ 1.65
COL13A1-206ENST00000456019 UNC5CLQ8IV45 518 aa25.35■■□□□ 1.65
COL13A1-206ENST00000456019 QRICH2Q9H0J4 1663 aa25.35■■□□□ 1.65
COL13A1-206ENST00000456019 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.34■■□□□ 1.65
COL13A1-206ENST00000456019 POLR3AO14802 1390 aaPredicted RBP25.34■■□□□ 1.65
COL13A1-206ENST00000456019 PLEKHG3A1L390 1219 aa25.34■■□□□ 1.65
COL13A1-206ENST00000456019 SRPK2P78362 688 aaKnown RBP25.34■■□□□ 1.65
COL13A1-206ENST00000456019 UPF1Q92900 1129 aaKnown RBP eCLIP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms