RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 C1orf167Q5SNV9 1468 aa36.04■■■■□ 3.36
MSH2-203ENST00000454849 STAC3Q96MF2 364 aa36.03■■■■□ 3.36
MSH2-203ENST00000454849 KNDC1Q76NI1 1749 aa36.01■■■■□ 3.36
MSH2-203ENST00000454849 ILDR2Q71H61 639 aa36.01■■■■□ 3.36
MSH2-203ENST00000454849 L3MBTL2Q969R5 705 aa36■■■■□ 3.35
MSH2-203ENST00000454849 POGKQ9P215 609 aa36■■■■□ 3.35
MSH2-203ENST00000454849 ADGRB1O14514 1584 aa36■■■■□ 3.35
MSH2-203ENST00000454849 SIRT1Q96EB6 747 aa35.98■■■■□ 3.35
MSH2-203ENST00000454849 COL16A1Q07092 1604 aaPredicted RBP35.97■■■■□ 3.35
MSH2-203ENST00000454849 AHDC1Q5TGY3 1603 aaPredicted RBP35.95■■■■□ 3.35
MSH2-203ENST00000454849 PHF23Q9BUL5 403 aaPredicted RBP35.95■■■■□ 3.35
MSH2-203ENST00000454849 ESCO1Q5FWF5 840 aa35.94■■■■□ 3.34
MSH2-203ENST00000454849 JCADQ9P266 1359 aa35.93■■■■□ 3.34
MSH2-203ENST00000454849 NBPF1Q3BBV0 1214 aa35.92■■■■□ 3.34
MSH2-203ENST00000454849 CDC42BPGQ6DT37 1551 aa35.91■■■■□ 3.34
MSH2-203ENST00000454849 HIRIP3Q9BW71 556 aaPredicted RBP35.91■■■■□ 3.34
MSH2-203ENST00000454849 MINK1Q8N4C8 1332 aaPredicted RBP35.88■■■■□ 3.33
MSH2-203ENST00000454849 DLC1Q96QB1 1528 aa35.86■■■■□ 3.33
MSH2-203ENST00000454849 XPCQ01831 940 aaPredicted RBP35.84■■■■□ 3.33
MSH2-203ENST00000454849 NHSL1Q5SYE7 1610 aa35.83■■■■□ 3.33
MSH2-203ENST00000454849 NUTM2BA6NNL0 878 aaPredicted RBP35.83■■■■□ 3.33
MSH2-203ENST00000454849 NUTM2EB1AL46 878 aaPredicted RBP35.83■■■■□ 3.33
MSH2-203ENST00000454849 NUTM2AQ8IVF1 878 aaPredicted RBP35.83■■■■□ 3.33
MSH2-203ENST00000454849 PCGF6Q9BYE7 350 aa35.83■■■■□ 3.33
MSH2-203ENST00000454849 FOXO3O43524 673 aa35.82■■■■□ 3.32
MSH2-203ENST00000454849 LRRC59Q96AG4 307 aaKnown RBP35.81■■■■□ 3.32
MSH2-203ENST00000454849 FMN2Q9NZ56 1722 aa35.78■■■■□ 3.32
MSH2-203ENST00000454849 RGS17Q9UGC6 210 aaPredicted RBP35.78■■■■□ 3.32
MSH2-203ENST00000454849 SOS2Q07890 1332 aaPredicted RBP35.75■■■■□ 3.31
MSH2-203ENST00000454849 MEX3CQ5U5Q3 659 aaKnown RBP35.74■■■■□ 3.31
MSH2-203ENST00000454849 LRP6O75581 1613 aa35.74■■■■□ 3.31
MSH2-203ENST00000454849 SPATA31A6Q5VVP1 1343 aa35.74■■■■□ 3.31
MSH2-203ENST00000454849 KIAA1210Q9ULL0 1709 aa35.71■■■■□ 3.31
MSH2-203ENST00000454849 NPHP3Q7Z494 1330 aa35.71■■■■□ 3.31
MSH2-203ENST00000454849 PNPLA6Q8IY17 1366 aa35.71■■■■□ 3.31
MSH2-203ENST00000454849 SHPRHQ149N8 1683 aa35.71■■■■□ 3.31
MSH2-203ENST00000454849 ARHGEF28Q8N1W1 1705 aaKnown RBP35.71■■■■□ 3.31
MSH2-203ENST00000454849 RGPD8O14715 1765 aaPredicted RBP35.7■■■■□ 3.31
MSH2-203ENST00000454849 NBPF8Q3BBV2 869 aa35.7■■■■□ 3.31
MSH2-203ENST00000454849 PHF8Q9UPP1 1060 aa35.7■■■■□ 3.31
MSH2-203ENST00000454849 WASLO00401 505 aaPredicted RBP35.69■■■■□ 3.3
MSH2-203ENST00000454849 PMFBP1Q8TBY8 1022 aa35.68■■■■□ 3.3
MSH2-203ENST00000454849 TONSLQ96HA7 1378 aa35.66■■■■□ 3.3
MSH2-203ENST00000454849 PRR36Q9H6K5 1346 aa35.65■■■■□ 3.3
MSH2-203ENST00000454849 PXDNQ92626 1479 aa35.64■■■■□ 3.3
MSH2-203ENST00000454849 ADGRB2O60241 1585 aa35.64■■■■□ 3.3
MSH2-203ENST00000454849 POTEAQ6S8J7 498 aa35.63■■■■□ 3.29
MSH2-203ENST00000454849 KRT28Q7Z3Y7 464 aa35.63■■■■□ 3.29
MSH2-203ENST00000454849 USP32Q8NFA0 1604 aa35.61■■■■□ 3.29
MSH2-203ENST00000454849 ADAMTS2O95450 1211 aa35.6■■■■□ 3.29
MSH2-203ENST00000454849 CDK19Q9BWU1 502 aa35.6■■■■□ 3.29
MSH2-203ENST00000454849 ROCK2O75116 1388 aaKnown RBP35.6■■■■□ 3.29
MSH2-203ENST00000454849 PLEKHG5O94827 1062 aa35.58■■■■□ 3.29
MSH2-203ENST00000454849 CENPJQ9HC77 1338 aaPredicted RBP35.57■■■■□ 3.29
MSH2-203ENST00000454849 ANKARQ7Z5J8 1434 aa35.57■■■■□ 3.29
MSH2-203ENST00000454849 TRPM1Q7Z4N2 1603 aa35.57■■■■□ 3.29
MSH2-203ENST00000454849 PSME1Q06323 249 aa35.57■■■■□ 3.28
MSH2-203ENST00000454849 NUDT16Q96DE0 195 aaKnown RBP35.55■■■■□ 3.28
MSH2-203ENST00000454849 C8orf37Q96NL8 207 aa35.55■■■■□ 3.28
MSH2-203ENST00000454849 KIF1AQ12756 1690 aa35.55■■■■□ 3.28
MSH2-203ENST00000454849 TULP4Q9NRJ4 1543 aa35.54■■■■□ 3.28
MSH2-203ENST00000454849 LMOD2Q6P5Q4 547 aa35.52■■■■□ 3.28
MSH2-203ENST00000454849 EIF3AQ14152 1382 aaKnown RBP35.51■■■■□ 3.28
MSH2-203ENST00000454849 SPATA31A3Q5VYP0 1347 aa35.51■■■■□ 3.27
MSH2-203ENST00000454849 NGDNQ8NEJ9 315 aaKnown RBP35.49■■■■□ 3.27
MSH2-203ENST00000454849 SOCS7O14512 581 aa35.48■■■■□ 3.27
MSH2-203ENST00000454849 AFF2P51816 1311 aa35.48■■■■□ 3.27
MSH2-203ENST00000454849 SRPK2P78362 688 aaKnown RBP35.47■■■■□ 3.27
MSH2-203ENST00000454849 CABP2Q9NPB3 220 aa35.47■■■■□ 3.27
MSH2-203ENST00000454849 NGLY1Q96IV0 654 aa35.45■■■■□ 3.27
MSH2-203ENST00000454849 CARD11Q9BXL7 1154 aa35.45■■■■□ 3.27
MSH2-203ENST00000454849 ATP7BP35670 1465 aa35.45■■■■□ 3.27
MSH2-203ENST00000454849 CABLES1Q8TDN4 633 aa35.43■■■■□ 3.26
MSH2-203ENST00000454849 QRICH2Q9H0J4 1663 aa35.43■■■■□ 3.26
MSH2-203ENST00000454849 ZNF772Q68DY9 489 aaPredicted RBP35.42■■■■□ 3.26
MSH2-203ENST00000454849 TNS3Q68CZ2 1445 aa35.4■■■■□ 3.26
MSH2-203ENST00000454849 GPRASP1Q5JY77 1395 aa35.4■■■■□ 3.26
MSH2-203ENST00000454849 COL22A1Q8NFW1 1626 aaPredicted RBP35.4■■■■□ 3.26
MSH2-203ENST00000454849 PAK3O75914 559 aaPredicted RBP35.39■■■■□ 3.26
MSH2-203ENST00000454849 CCDC61Q9Y6R9 512 aa35.39■■■■□ 3.26
MSH2-203ENST00000454849 SBNO1A3KN83 1393 aa35.38■■■■□ 3.26
MSH2-203ENST00000454849 HAP1P54257 671 aaPredicted RBP35.35■■■■□ 3.25
MSH2-203ENST00000454849 RALGAPBQ86X10 1494 aa35.35■■■■□ 3.25
MSH2-203ENST00000454849 ACEP12821 1306 aa35.34■■■■□ 3.25
MSH2-203ENST00000454849 CCER1Q8TC90 406 aaPredicted RBP35.34■■■■□ 3.25
MSH2-203ENST00000454849 EVC2Q86UK5 1308 aa35.32■■■■□ 3.24
MSH2-203ENST00000454849 QTRT2Q9H974 415 aaKnown RBP35.31■■■■□ 3.24
MSH2-203ENST00000454849 ITSN1Q15811 1721 aa35.3■■■■□ 3.24
MSH2-203ENST00000454849 PLEKHG3A1L390 1219 aa35.3■■■■□ 3.24
MSH2-203ENST00000454849 ARHGEF10O15013 1369 aa35.29■■■■□ 3.24
MSH2-203ENST00000454849 CABP1Q9NZU7 370 aa35.29■■■■□ 3.24
MSH2-203ENST00000454849 USP21Q9UK80 565 aa35.29■■■■□ 3.24
MSH2-203ENST00000454849 PPIP5K1Q6PFW1 1433 aa35.29■■■■□ 3.24
MSH2-203ENST00000454849 TRPM3Q9HCF6 1732 aaPredicted RBP35.29■■■■□ 3.24
MSH2-203ENST00000454849 RXRBP28702 533 aa35.27■■■■□ 3.24
MSH2-203ENST00000454849 NUTM2GQ5VZR2 741 aa35.27■■■■□ 3.24
MSH2-203ENST00000454849 TOPAZ1Q8N9V7 1692 aa35.27■■■■□ 3.24
MSH2-203ENST00000454849 POLR3AO14802 1390 aaPredicted RBP35.25■■■■□ 3.23
MSH2-203ENST00000454849 FNBP4Q8N3X1 1017 aaPredicted RBP35.24■■■■□ 3.23
MSH2-203ENST00000454849 CLSPNQ9HAW4 1339 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms