RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
DDX39A-203ENST00000454233 DCAF11Q8TEB1 546 aa15.59■□□□□ 0.09
DDX39A-203ENST00000454233 SIRT1Q96EB6 747 aa15.59■□□□□ 0.09
DDX39A-203ENST00000454233 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
DDX39A-203ENST00000454233 KDM2AQ9Y2K7 1162 aa15.59■□□□□ 0.09
DDX39A-203ENST00000454233 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.09
DDX39A-203ENST00000454233 SHPRHQ149N8 1683 aa15.58■□□□□ 0.08
DDX39A-203ENST00000454233 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
DDX39A-203ENST00000454233 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
DDX39A-203ENST00000454233 PLEKHH1Q9ULM0 1364 aa15.57■□□□□ 0.08
DDX39A-203ENST00000454233 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
DDX39A-203ENST00000454233 NUTM2BA6NNL0 878 aaPredicted RBP15.55■□□□□ 0.08
DDX39A-203ENST00000454233 NUTM2EB1AL46 878 aaPredicted RBP15.55■□□□□ 0.08
DDX39A-203ENST00000454233 NUTM2AQ8IVF1 878 aaPredicted RBP15.55■□□□□ 0.08
DDX39A-203ENST00000454233 LRP6O75581 1613 aa15.54■□□□□ 0.08
DDX39A-203ENST00000454233 POGKQ9P215 609 aa15.54■□□□□ 0.08
DDX39A-203ENST00000454233 NPHP3Q7Z494 1330 aa15.53■□□□□ 0.08
DDX39A-203ENST00000454233 NUTM2FA1L443 756 aa15.53■□□□□ 0.08
DDX39A-203ENST00000454233 POTEAQ6S8J7 498 aa15.53■□□□□ 0.08
DDX39A-203ENST00000454233 PRAM1Q96QH2 718 aa15.53■□□□□ 0.08
DDX39A-203ENST00000454233 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.08
DDX39A-203ENST00000454233 SOS2Q07890 1332 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-203ENST00000454233 DLC1Q96QB1 1528 aa15.52■□□□□ 0.07
DDX39A-203ENST00000454233 SAFB2Q14151 953 aaKnown RBP eCLIP15.51■□□□□ 0.07
DDX39A-203ENST00000454233 TRAK1Q9UPV9 953 aa15.51■□□□□ 0.07
DDX39A-203ENST00000454233 ADGRB1O14514 1584 aa15.5■□□□□ 0.07
DDX39A-203ENST00000454233 ZNF772Q68DY9 489 aaPredicted RBP15.5■□□□□ 0.07
DDX39A-203ENST00000454233 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
DDX39A-203ENST00000454233 FOXO3O43524 673 aa15.49■□□□□ 0.07
DDX39A-203ENST00000454233 XPCQ01831 940 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-203ENST00000454233 AFF2P51816 1311 aa15.45■□□□□ 0.06
DDX39A-203ENST00000454233 KIF1AQ12756 1690 aa15.45■□□□□ 0.06
DDX39A-203ENST00000454233 C8orf37Q96NL8 207 aa15.45■□□□□ 0.06
DDX39A-203ENST00000454233 PHF8Q9UPP1 1060 aa15.45■□□□□ 0.06
DDX39A-203ENST00000454233 PXDNQ92626 1479 aa15.45■□□□□ 0.06
DDX39A-203ENST00000454233 MINK1Q8N4C8 1332 aaPredicted RBP15.44■□□□□ 0.06
DDX39A-203ENST00000454233 ADAMTS2O95450 1211 aa15.44■□□□□ 0.06
DDX39A-203ENST00000454233 EIF3AQ14152 1382 aaKnown RBP15.44■□□□□ 0.06
DDX39A-203ENST00000454233 HIRIP3Q9BW71 556 aaPredicted RBP15.43■□□□□ 0.06
DDX39A-203ENST00000454233 ADGRB2O60241 1585 aa15.43■□□□□ 0.06
DDX39A-203ENST00000454233 ANKARQ7Z5J8 1434 aa15.43■□□□□ 0.06
DDX39A-203ENST00000454233 PSME1Q06323 249 aa15.42■□□□□ 0.06
DDX39A-203ENST00000454233 KRT28Q7Z3Y7 464 aa15.42■□□□□ 0.06
DDX39A-203ENST00000454233 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
DDX39A-203ENST00000454233 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
DDX39A-203ENST00000454233 COL22A1Q8NFW1 1626 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-203ENST00000454233 RGPD8O14715 1765 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-203ENST00000454233 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
DDX39A-203ENST00000454233 RXRBP28702 533 aa15.4■□□□□ 0.06
DDX39A-203ENST00000454233 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
DDX39A-203ENST00000454233 SPATA31A3Q5VYP0 1347 aa15.4■□□□□ 0.06
DDX39A-203ENST00000454233 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
DDX39A-203ENST00000454233 L3MBTL2Q969R5 705 aa15.39■□□□□ 0.05
DDX39A-203ENST00000454233 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
DDX39A-203ENST00000454233 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
DDX39A-203ENST00000454233 NBPF1Q3BBV0 1214 aa15.38■□□□□ 0.05
DDX39A-203ENST00000454233 PMFBP1Q8TBY8 1022 aa15.38■□□□□ 0.05
DDX39A-203ENST00000454233 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
DDX39A-203ENST00000454233 USP32Q8NFA0 1604 aa15.37■□□□□ 0.05
DDX39A-203ENST00000454233 QTRT2Q9H974 415 aaKnown RBP15.37■□□□□ 0.05
DDX39A-203ENST00000454233 SBNO1A3KN83 1393 aa15.36■□□□□ 0.05
DDX39A-203ENST00000454233 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
DDX39A-203ENST00000454233 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
DDX39A-203ENST00000454233 USP21Q9UK80 565 aa15.36■□□□□ 0.05
DDX39A-203ENST00000454233 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
DDX39A-203ENST00000454233 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
DDX39A-203ENST00000454233 RBM6P78332 1123 aaKnown RBP15.35■□□□□ 0.05
DDX39A-203ENST00000454233 PRR36Q9H6K5 1346 aa15.35■□□□□ 0.05
DDX39A-203ENST00000454233 ARHGEF10O15013 1369 aa15.35■□□□□ 0.05
DDX39A-203ENST00000454233 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-203ENST00000454233 FNBP4Q8N3X1 1017 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-203ENST00000454233 NGDNQ8NEJ9 315 aaKnown RBP15.34■□□□□ 0.05
DDX39A-203ENST00000454233 NUDT16Q96DE0 195 aaKnown RBP15.33■□□□□ 0.04
DDX39A-203ENST00000454233 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
DDX39A-203ENST00000454233 TRPC5Q9UL62 973 aaPredicted RBP15.33■□□□□ 0.04
DDX39A-203ENST00000454233 CENPJQ9HC77 1338 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-203ENST00000454233 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
DDX39A-203ENST00000454233 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
DDX39A-203ENST00000454233 ATP7BP35670 1465 aa15.3■□□□□ 0.04
DDX39A-203ENST00000454233 ITSN1Q15811 1721 aa15.3■□□□□ 0.04
DDX39A-203ENST00000454233 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
DDX39A-203ENST00000454233 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-203ENST00000454233 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
DDX39A-203ENST00000454233 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
DDX39A-203ENST00000454233 ATRNO75882 1429 aa15.28■□□□□ 0.04
DDX39A-203ENST00000454233 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
DDX39A-203ENST00000454233 TRPM1Q7Z4N2 1603 aa15.28■□□□□ 0.04
DDX39A-203ENST00000454233 BCL9LQ86UU0 1499 aa15.27■□□□□ 0.04
DDX39A-203ENST00000454233 RGS12O14924 1447 aa15.27■□□□□ 0.04
DDX39A-203ENST00000454233 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
DDX39A-203ENST00000454233 TRPM3Q9HCF6 1732 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-203ENST00000454233 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
DDX39A-203ENST00000454233 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
DDX39A-203ENST00000454233 PLEKHG3A1L390 1219 aa15.25■□□□□ 0.03
DDX39A-203ENST00000454233 SLIT2O94813 1529 aa15.25■□□□□ 0.03
DDX39A-203ENST00000454233 ALS2Q96Q42 1657 aa15.25■□□□□ 0.03
DDX39A-203ENST00000454233 ACEP12821 1306 aa15.24■□□□□ 0.03
DDX39A-203ENST00000454233 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
DDX39A-203ENST00000454233 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
DDX39A-203ENST00000454233 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms