RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 NUTM2FA1L443 756 aa14.17□□□□□ -0.14
USP54-207ENST00000451492 DCAF11Q8TEB1 546 aa14.17□□□□□ -0.14
USP54-207ENST00000451492 SOCS7O14512 581 aa14.15□□□□□ -0.14
USP54-207ENST00000451492 HRCP23327 699 aa14.15□□□□□ -0.14
USP54-207ENST00000451492 SAFB2Q14151 953 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP54-207ENST00000451492 MEX3CQ5U5Q3 659 aaKnown RBP14.15□□□□□ -0.14
USP54-207ENST00000451492 ORAI2Q96SN7 254 aa14.15□□□□□ -0.14
USP54-207ENST00000451492 ARHGEF28Q8N1W1 1705 aaKnown RBP14.15□□□□□ -0.14
USP54-207ENST00000451492 ADGRB1O14514 1584 aa14.14□□□□□ -0.15
USP54-207ENST00000451492 DHX57Q6P158 1386 aaKnown RBP14.14□□□□□ -0.15
USP54-207ENST00000451492 NUTM2BA6NNL0 878 aaPredicted RBP14.14□□□□□ -0.15
USP54-207ENST00000451492 NUTM2EB1AL46 878 aaPredicted RBP14.14□□□□□ -0.15
USP54-207ENST00000451492 NUTM2AQ8IVF1 878 aaPredicted RBP14.14□□□□□ -0.15
USP54-207ENST00000451492 ABCC11Q96J66 1382 aa14.13□□□□□ -0.15
USP54-207ENST00000451492 C14orf93Q9H972 538 aaKnown RBP14.13□□□□□ -0.15
USP54-207ENST00000451492 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
USP54-207ENST00000451492 KIF1AQ12756 1690 aa14.13□□□□□ -0.15
USP54-207ENST00000451492 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
USP54-207ENST00000451492 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
USP54-207ENST00000451492 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
USP54-207ENST00000451492 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
USP54-207ENST00000451492 TRAK1Q9UPV9 953 aa14.1□□□□□ -0.15
USP54-207ENST00000451492 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
USP54-207ENST00000451492 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
USP54-207ENST00000451492 XPCQ01831 940 aaPredicted RBP14.09□□□□□ -0.15
USP54-207ENST00000451492 POTEAQ6S8J7 498 aa14.09□□□□□ -0.15
USP54-207ENST00000451492 POGKQ9P215 609 aa14.09□□□□□ -0.15
USP54-207ENST00000451492 KIAA1210Q9ULL0 1709 aa14.09□□□□□ -0.15
USP54-207ENST00000451492 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
USP54-207ENST00000451492 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
USP54-207ENST00000451492 LRRC59Q96AG4 307 aaKnown RBP14.08□□□□□ -0.16
USP54-207ENST00000451492 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
USP54-207ENST00000451492 COL22A1Q8NFW1 1626 aaPredicted RBP14.07□□□□□ -0.16
USP54-207ENST00000451492 PXDNQ92626 1479 aa14.06□□□□□ -0.16
USP54-207ENST00000451492 MINK1Q8N4C8 1332 aaPredicted RBP14.06□□□□□ -0.16
USP54-207ENST00000451492 ITSN1Q15811 1721 aa14.05□□□□□ -0.16
USP54-207ENST00000451492 FOXO3O43524 673 aa14.05□□□□□ -0.16
USP54-207ENST00000451492 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
USP54-207ENST00000451492 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
USP54-207ENST00000451492 SOS2Q07890 1332 aaPredicted RBP14.04□□□□□ -0.16
USP54-207ENST00000451492 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
USP54-207ENST00000451492 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
USP54-207ENST00000451492 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
USP54-207ENST00000451492 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
USP54-207ENST00000451492 QRICH2Q9H0J4 1663 aa14.03□□□□□ -0.16
USP54-207ENST00000451492 ABCA3Q99758 1704 aa14.03□□□□□ -0.16
USP54-207ENST00000451492 TRPM1Q7Z4N2 1603 aa14.02□□□□□ -0.16
USP54-207ENST00000451492 AFF2P51816 1311 aa14.02□□□□□ -0.17
USP54-207ENST00000451492 SIRT1Q96EB6 747 aa14.02□□□□□ -0.17
USP54-207ENST00000451492 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
USP54-207ENST00000451492 PMFBP1Q8TBY8 1022 aa14□□□□□ -0.17
USP54-207ENST00000451492 PHF8Q9UPP1 1060 aa14□□□□□ -0.17
USP54-207ENST00000451492 TRPM3Q9HCF6 1732 aaPredicted RBP13.99□□□□□ -0.17
USP54-207ENST00000451492 ZNF772Q68DY9 489 aaPredicted RBP13.99□□□□□ -0.17
USP54-207ENST00000451492 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
USP54-207ENST00000451492 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
USP54-207ENST00000451492 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
USP54-207ENST00000451492 TNS3Q68CZ2 1445 aa13.98□□□□□ -0.17
USP54-207ENST00000451492 ANKARQ7Z5J8 1434 aa13.98□□□□□ -0.17
USP54-207ENST00000451492 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
USP54-207ENST00000451492 KRT28Q7Z3Y7 464 aa13.97□□□□□ -0.17
USP54-207ENST00000451492 L3MBTL2Q969R5 705 aa13.97□□□□□ -0.17
USP54-207ENST00000451492 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
USP54-207ENST00000451492 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
USP54-207ENST00000451492 ALS2Q96Q42 1657 aa13.96□□□□□ -0.17
USP54-207ENST00000451492 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
USP54-207ENST00000451492 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.18
USP54-207ENST00000451492 PRR36Q9H6K5 1346 aa13.95□□□□□ -0.18
USP54-207ENST00000451492 ATP7BP35670 1465 aa13.95□□□□□ -0.18
USP54-207ENST00000451492 WASLO00401 505 aaPredicted RBP13.95□□□□□ -0.18
USP54-207ENST00000451492 SPATA31A3Q5VYP0 1347 aa13.94□□□□□ -0.18
USP54-207ENST00000451492 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
USP54-207ENST00000451492 PSME1Q06323 249 aa13.94□□□□□ -0.18
USP54-207ENST00000451492 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
USP54-207ENST00000451492 RXRBP28702 533 aa13.93□□□□□ -0.18
USP54-207ENST00000451492 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
USP54-207ENST00000451492 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
USP54-207ENST00000451492 USP21Q9UK80 565 aa13.92□□□□□ -0.18
USP54-207ENST00000451492 RGS12O14924 1447 aa13.91□□□□□ -0.18
USP54-207ENST00000451492 PHRF1Q9P1Y6 1649 aaKnown RBP13.91□□□□□ -0.18
USP54-207ENST00000451492 QTRT2Q9H974 415 aaKnown RBP13.91□□□□□ -0.18
USP54-207ENST00000451492 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
USP54-207ENST00000451492 GPRASP1Q5JY77 1395 aa13.91□□□□□ -0.18
USP54-207ENST00000451492 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
USP54-207ENST00000451492 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
USP54-207ENST00000451492 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
USP54-207ENST00000451492 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
USP54-207ENST00000451492 SBNO1A3KN83 1393 aa13.9□□□□□ -0.18
USP54-207ENST00000451492 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
USP54-207ENST00000451492 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
USP54-207ENST00000451492 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
USP54-207ENST00000451492 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
USP54-207ENST00000451492 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
USP54-207ENST00000451492 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
USP54-207ENST00000451492 RBM6P78332 1123 aaKnown RBP13.87□□□□□ -0.19
USP54-207ENST00000451492 ATRNO75882 1429 aa13.87□□□□□ -0.19
USP54-207ENST00000451492 NRAPQ86VF7 1730 aa13.87□□□□□ -0.19
USP54-207ENST00000451492 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
USP54-207ENST00000451492 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
USP54-207ENST00000451492 CABP2Q9NPB3 220 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms