RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 TMEM132EQ6IEE7 984 aa35.06■■■■□ 3.2
MRPL28-205ENST00000447696 STK26Q9P289 416 aa35.05■■■■□ 3.2
MRPL28-205ENST00000447696 CFAP70Q5T0N1 1121 aa35.03■■■■□ 3.2
MRPL28-205ENST00000447696 CDK12Q9NYV4 1490 aaPredicted RBP35.03■■■■□ 3.2
MRPL28-205ENST00000447696 CDC42BPGQ6DT37 1551 aa35.02■■■■□ 3.2
MRPL28-205ENST00000447696 C1orf167Q5SNV9 1468 aa35.02■■■■□ 3.2
MRPL28-205ENST00000447696 DHX57Q6P158 1386 aaKnown RBP35■■■■□ 3.19
MRPL28-205ENST00000447696 DCAF11Q8TEB1 546 aa35■■■■□ 3.19
MRPL28-205ENST00000447696 SIRT1Q96EB6 747 aa35■■■■□ 3.19
MRPL28-205ENST00000447696 NHSL1Q5SYE7 1610 aa34.98■■■■□ 3.19
MRPL28-205ENST00000447696 WAPLQ7Z5K2 1190 aa34.95■■■■□ 3.19
MRPL28-205ENST00000447696 KDM2AQ9Y2K7 1162 aa34.94■■■■□ 3.18
MRPL28-205ENST00000447696 ADGRB1O14514 1584 aa34.94■■■■□ 3.18
MRPL28-205ENST00000447696 PLEKHH1Q9ULM0 1364 aa34.93■■■■□ 3.18
MRPL28-205ENST00000447696 NUTM2BA6NNL0 878 aaPredicted RBP34.93■■■■□ 3.18
MRPL28-205ENST00000447696 NUTM2EB1AL46 878 aaPredicted RBP34.93■■■■□ 3.18
MRPL28-205ENST00000447696 NUTM2AQ8IVF1 878 aaPredicted RBP34.93■■■■□ 3.18
MRPL28-205ENST00000447696 LRRC59Q96AG4 307 aaKnown RBP34.92■■■■□ 3.18
MRPL28-205ENST00000447696 DLC1Q96QB1 1528 aa34.91■■■■□ 3.18
MRPL28-205ENST00000447696 AFF2P51816 1311 aa34.89■■■■□ 3.18
MRPL28-205ENST00000447696 ORAI2Q96SN7 254 aa34.84■■■■□ 3.17
MRPL28-205ENST00000447696 RBM6P78332 1123 aaKnown RBP34.81■■■■□ 3.16
MRPL28-205ENST00000447696 PRAM1Q96QH2 718 aa34.81■■■■□ 3.16
MRPL28-205ENST00000447696 FMN2Q9NZ56 1722 aa34.81■■■■□ 3.16
MRPL28-205ENST00000447696 TRIM26Q12899 539 aaPredicted RBP34.79■■■■□ 3.16
MRPL28-205ENST00000447696 DDX17Q92841 729 aaKnown RBP34.79■■■■□ 3.16
MRPL28-205ENST00000447696 QTRT2Q9H974 415 aaKnown RBP34.77■■■■□ 3.16
MRPL28-205ENST00000447696 SOS2Q07890 1332 aaPredicted RBP34.77■■■■□ 3.16
MRPL28-205ENST00000447696 ESCO1Q5FWF5 840 aa34.76■■■■□ 3.16
MRPL28-205ENST00000447696 POGKQ9P215 609 aa34.76■■■■□ 3.16
MRPL28-205ENST00000447696 KIAA1210Q9ULL0 1709 aa34.75■■■■□ 3.15
MRPL28-205ENST00000447696 C8orf37Q96NL8 207 aa34.75■■■■□ 3.15
MRPL28-205ENST00000447696 TRAK1Q9UPV9 953 aa34.75■■■■□ 3.15
MRPL28-205ENST00000447696 ADGRB2O60241 1585 aa34.74■■■■□ 3.15
MRPL28-205ENST00000447696 PNPLA6Q8IY17 1366 aa34.74■■■■□ 3.15
MRPL28-205ENST00000447696 NPHP3Q7Z494 1330 aa34.73■■■■□ 3.15
MRPL28-205ENST00000447696 NGLY1Q96IV0 654 aa34.72■■■■□ 3.15
MRPL28-205ENST00000447696 SAFB2Q14151 953 aaKnown RBP eCLIP34.71■■■■□ 3.15
MRPL28-205ENST00000447696 RGS12O14924 1447 aa34.7■■■■□ 3.15
MRPL28-205ENST00000447696 NUTM2FA1L443 756 aa34.69■■■■□ 3.14
MRPL28-205ENST00000447696 KIF1AQ12756 1690 aa34.69■■■■□ 3.14
MRPL28-205ENST00000447696 PXDNQ92626 1479 aa34.66■■■■□ 3.14
MRPL28-205ENST00000447696 ANKARQ7Z5J8 1434 aa34.65■■■■□ 3.14
MRPL28-205ENST00000447696 SIN3AQ96ST3 1273 aa34.65■■■■□ 3.14
MRPL28-205ENST00000447696 ARHGEF28Q8N1W1 1705 aaKnown RBP34.64■■■■□ 3.14
MRPL28-205ENST00000447696 L3MBTL2Q969R5 705 aa34.64■■■■□ 3.14
MRPL28-205ENST00000447696 FOXO3O43524 673 aa34.63■■■■□ 3.13
MRPL28-205ENST00000447696 EIF3AQ14152 1382 aaKnown RBP34.62■■■■□ 3.13
MRPL28-205ENST00000447696 ATAD2Q6PL18 1390 aa34.61■■■■□ 3.13
MRPL28-205ENST00000447696 MINK1Q8N4C8 1332 aaPredicted RBP34.58■■■■□ 3.13
MRPL28-205ENST00000447696 COL22A1Q8NFW1 1626 aaPredicted RBP34.58■■■■□ 3.13
MRPL28-205ENST00000447696 ADAMTS2O95450 1211 aa34.57■■■■□ 3.12
MRPL28-205ENST00000447696 NEUROD1Q13562 356 aa34.57■■■■□ 3.12
MRPL28-205ENST00000447696 PHF8Q9UPP1 1060 aa34.57■■■■□ 3.12
MRPL28-205ENST00000447696 USP32Q8NFA0 1604 aa34.56■■■■□ 3.12
MRPL28-205ENST00000447696 HIRIP3Q9BW71 556 aaPredicted RBP34.56■■■■□ 3.12
MRPL28-205ENST00000447696 TRPC5Q9UL62 973 aaPredicted RBP34.56■■■■□ 3.12
MRPL28-205ENST00000447696 RGPD8O14715 1765 aaPredicted RBP34.55■■■■□ 3.12
MRPL28-205ENST00000447696 NBPF1Q3BBV0 1214 aa34.55■■■■□ 3.12
MRPL28-205ENST00000447696 TULP4Q9NRJ4 1543 aa34.55■■■■□ 3.12
MRPL28-205ENST00000447696 WASLO00401 505 aaPredicted RBP34.54■■■■□ 3.12
MRPL28-205ENST00000447696 USP21Q9UK80 565 aa34.54■■■■□ 3.12
MRPL28-205ENST00000447696 XPCQ01831 940 aaPredicted RBP34.53■■■■□ 3.12
MRPL28-205ENST00000447696 FNBP4Q8N3X1 1017 aaPredicted RBP34.51■■■■□ 3.12
MRPL28-205ENST00000447696 KRT28Q7Z3Y7 464 aa34.48■■■■□ 3.11
MRPL28-205ENST00000447696 SPATA31A3Q5VYP0 1347 aa34.47■■■■□ 3.11
MRPL28-205ENST00000447696 PRR36Q9H6K5 1346 aa34.47■■■■□ 3.11
MRPL28-205ENST00000447696 TRPM1Q7Z4N2 1603 aa34.46■■■■□ 3.11
MRPL28-205ENST00000447696 PSME1Q06323 249 aa34.46■■■■□ 3.11
MRPL28-205ENST00000447696 SRCAPQ6ZRS2 3230 aa34.45■■■■□ 3.11
MRPL28-205ENST00000447696 CCDC125Q86Z20 511 aa34.45■■■■□ 3.11
MRPL28-205ENST00000447696 ZRANB1Q9UGI0 708 aa34.44■■■■□ 3.1
MRPL28-205ENST00000447696 SBNO1A3KN83 1393 aa34.44■■■■□ 3.1
MRPL28-205ENST00000447696 TNS3Q68CZ2 1445 aa34.43■■■■□ 3.1
MRPL28-205ENST00000447696 ATRNO75882 1429 aa34.42■■■■□ 3.1
MRPL28-205ENST00000447696 ATP7BP35670 1465 aa34.41■■■■□ 3.1
MRPL28-205ENST00000447696 CENPJQ9HC77 1338 aaPredicted RBP34.4■■■■□ 3.1
MRPL28-205ENST00000447696 PMFBP1Q8TBY8 1022 aa34.4■■■■□ 3.1
MRPL28-205ENST00000447696 ITSN1Q15811 1721 aa34.38■■■■□ 3.09
MRPL28-205ENST00000447696 CDK19Q9BWU1 502 aa34.37■■■■□ 3.09
MRPL28-205ENST00000447696 ROCK2O75116 1388 aaKnown RBP34.36■■■■□ 3.09
MRPL28-205ENST00000447696 TONSLQ96HA7 1378 aa34.36■■■■□ 3.09
MRPL28-205ENST00000447696 NUDT16Q96DE0 195 aaKnown RBP34.36■■■■□ 3.09
MRPL28-205ENST00000447696 ARHGEF10O15013 1369 aa34.36■■■■□ 3.09
MRPL28-205ENST00000447696 GPRASP1Q5JY77 1395 aa34.36■■■■□ 3.09
MRPL28-205ENST00000447696 QRICH2Q9H0J4 1663 aa34.32■■■■□ 3.08
MRPL28-205ENST00000447696 TRPM3Q9HCF6 1732 aaPredicted RBP34.32■■■■□ 3.08
MRPL28-205ENST00000447696 MARF1Q9Y4F3 1742 aaKnown RBP34.31■■■■□ 3.08
MRPL28-205ENST00000447696 NBPF8Q3BBV2 869 aa34.31■■■■□ 3.08
MRPL28-205ENST00000447696 TOPAZ1Q8N9V7 1692 aa34.31■■■■□ 3.08
MRPL28-205ENST00000447696 NGDNQ8NEJ9 315 aaKnown RBP34.3■■■■□ 3.08
MRPL28-205ENST00000447696 CCDC61Q9Y6R9 512 aa34.28■■■■□ 3.08
MRPL28-205ENST00000447696 BCL9LQ86UU0 1499 aa34.27■■■■□ 3.08
MRPL28-205ENST00000447696 GJD4Q96KN9 370 aaPredicted RBP34.26■■■■□ 3.08
MRPL28-205ENST00000447696 ALS2Q96Q42 1657 aa34.25■■■■□ 3.07
MRPL28-205ENST00000447696 POLR3AO14802 1390 aaPredicted RBP34.24■■■■□ 3.07
MRPL28-205ENST00000447696 LMOD2Q6P5Q4 547 aa34.24■■■■□ 3.07
MRPL28-205ENST00000447696 RALGAPBQ86X10 1494 aa34.24■■■■□ 3.07
MRPL28-205ENST00000447696 PLEKHG3A1L390 1219 aa34.23■■■■□ 3.07
MRPL28-205ENST00000447696 SRPK2P78362 688 aaKnown RBP34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms