RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
LIN54-202ENST00000442461 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
LIN54-202ENST00000442461 PLEKHD1A6NEE1 506 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 FIBPO43427 364 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 TNNT1P13805 278 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
LIN54-202ENST00000442461 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 CLGNO14967 610 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 FILIP1Q7Z7B0 1213 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 TXLNBQ8N3L3 684 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 OGFRQ9NZT2 677 aa12.37□□□□□ -0.43
LIN54-202ENST00000442461 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.36□□□□□ -0.43
LIN54-202ENST00000442461 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
LIN54-202ENST00000442461 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
LIN54-202ENST00000442461 USP25Q9UHP3 1055 aa12.36□□□□□ -0.43
LIN54-202ENST00000442461 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
LIN54-202ENST00000442461 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
LIN54-202ENST00000442461 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
LIN54-202ENST00000442461 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
LIN54-202ENST00000442461 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 UACAQ9BZF9 1416 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 NINLQ9Y2I6 1382 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 BCAR3O75815 825 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 ZKSCAN1P17029 563 aaPredicted RBP12.35□□□□□ -0.43
LIN54-202ENST00000442461 SSFA2P28290 1259 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
LIN54-202ENST00000442461 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
LIN54-202ENST00000442461 MNAT1P51948 309 aa12.34□□□□□ -0.43
LIN54-202ENST00000442461 C16orf45Q96MC5 204 aaPredicted RBP12.34□□□□□ -0.43
LIN54-202ENST00000442461 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
LIN54-202ENST00000442461 RRP12Q5JTH9 1297 aaKnown RBP12.34□□□□□ -0.43
LIN54-202ENST00000442461 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
LIN54-202ENST00000442461 DNAAF4Q8WXU2 420 aa12.34□□□□□ -0.43
LIN54-202ENST00000442461 NUP155O75694 1391 aa12.33□□□□□ -0.43
LIN54-202ENST00000442461 RAPGEF2Q9Y4G8 1499 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
LIN54-202ENST00000442461 PAXBP1Q9Y5B6 917 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 TDO2P48775 406 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 CCDC102AQ96A19 550 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 SDF4Q9BRK5 362 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 NOL7Q9UMY1 257 aaKnown RBP12.33□□□□□ -0.44
LIN54-202ENST00000442461 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
LIN54-202ENST00000442461 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
LIN54-202ENST00000442461 SLC4A10Q6U841 1118 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 PLCD4Q9BRC7 762 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 SMC2O95347 1197 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 DMTNQ08495 405 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 CENPHQ9H3R5 247 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 UVSSAQ2YD98 709 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
LIN54-202ENST00000442461 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
LIN54-202ENST00000442461 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 PES1O00541 588 aaKnown RBP12.31□□□□□ -0.44
LIN54-202ENST00000442461 C20orf194Q5TEA3 1177 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 ADCY5O95622 1261 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 LMAN1P49257 510 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 TTLL5Q6EMB2 1281 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
LIN54-202ENST00000442461 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
LIN54-202ENST00000442461 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
LIN54-202ENST00000442461 KINO60870 393 aaKnown RBP12.3□□□□□ -0.44
LIN54-202ENST00000442461 PDCP20941 246 aa12.3□□□□□ -0.44
LIN54-202ENST00000442461 C8orf34Q49A92 452 aa12.3□□□□□ -0.44
LIN54-202ENST00000442461 PDILTQ8N807 584 aa12.3□□□□□ -0.44
LIN54-202ENST00000442461 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
LIN54-202ENST00000442461 IVLP07476 585 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 CCDC183Q5T5S1 534 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 C10orf67Q8IYJ2 551 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 MYRIPQ8NFW9 859 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 CCDC91Q7Z6B0 441 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 ELL2O00472 640 aaPredicted RBP12.29□□□□□ -0.44
LIN54-202ENST00000442461 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 RUNDC1Q96C34 613 aa12.29□□□□□ -0.44
LIN54-202ENST00000442461 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
LIN54-202ENST00000442461 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
LIN54-202ENST00000442461 SSR1P43307 286 aaKnown RBP12.28□□□□□ -0.44
LIN54-202ENST00000442461 TTC31Q49AM3 519 aaPredicted RBP12.28□□□□□ -0.44
LIN54-202ENST00000442461 FMNL2Q96PY5 1086 aa12.28□□□□□ -0.44
LIN54-202ENST00000442461 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
LIN54-202ENST00000442461 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.44
LIN54-202ENST00000442461 HOOK1Q9UJC3 728 aaKnown RBP12.27□□□□□ -0.44
LIN54-202ENST00000442461 NEMFO60524 1076 aa12.27□□□□□ -0.45
LIN54-202ENST00000442461 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.45
LIN54-202ENST00000442461 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
LIN54-202ENST00000442461 GOLGA6L7A0A1B0GV03 622 aa12.27□□□□□ -0.45
LIN54-202ENST00000442461 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
LIN54-202ENST00000442461 KRT85P78386 507 aa12.27□□□□□ -0.45
LIN54-202ENST00000442461 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
LIN54-202ENST00000442461 CAGE1Q8TC20 777 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms