RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 PLA2G2CQ5R387 149 aa12.81□□□□□ -0.36
PTPRK-212ENST00000434424 NR1I2O75469 434 aa12.8□□□□□ -0.36
PTPRK-212ENST00000434424 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
PTPRK-212ENST00000434424 ZNF598Q86UK7 904 aaKnown RBP12.8□□□□□ -0.36
PTPRK-212ENST00000434424 SCUBE3Q8IX30 993 aa12.8□□□□□ -0.36
PTPRK-212ENST00000434424 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
PTPRK-212ENST00000434424 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
PTPRK-212ENST00000434424 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
PTPRK-212ENST00000434424 SLC6A16Q9GZN6 736 aa12.77□□□□□ -0.37
PTPRK-212ENST00000434424 PRR20EP86478 221 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 PRR20CP86479 221 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 PRR20DP86480 221 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 PRR20BP86481 221 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 PRR20AP86496 221 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
PTPRK-212ENST00000434424 ZNF697Q5TEC3 545 aa12.75□□□□□ -0.37
PTPRK-212ENST00000434424 REPIN1Q9BWE0 567 aaKnown RBP12.75□□□□□ -0.37
PTPRK-212ENST00000434424 GDF9O60383 454 aa12.74□□□□□ -0.37
PTPRK-212ENST00000434424 CLCN1P35523 988 aa12.74□□□□□ -0.37
PTPRK-212ENST00000434424 MYT1Q01538 1121 aa12.73□□□□□ -0.37
PTPRK-212ENST00000434424 MCM6Q14566 821 aa12.73□□□□□ -0.37
PTPRK-212ENST00000434424 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
PTPRK-212ENST00000434424 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
PTPRK-212ENST00000434424 SPSB2Q99619 263 aa12.72□□□□□ -0.37
PTPRK-212ENST00000434424 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
PTPRK-212ENST00000434424 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
PTPRK-212ENST00000434424 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
PTPRK-212ENST00000434424 MORN1Q5T089 497 aa12.7□□□□□ -0.38
PTPRK-212ENST00000434424 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
PTPRK-212ENST00000434424 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
PTPRK-212ENST00000434424 DGAT1O75907 488 aa12.69□□□□□ -0.38
PTPRK-212ENST00000434424 FUT2Q10981 343 aa12.69□□□□□ -0.38
PTPRK-212ENST00000434424 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
PTPRK-212ENST00000434424 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
PTPRK-212ENST00000434424 THAP11Q96EK4 314 aa12.69□□□□□ -0.38
PTPRK-212ENST00000434424 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
PTPRK-212ENST00000434424 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-212ENST00000434424 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-212ENST00000434424 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-212ENST00000434424 POTECB2RU33 542 aa12.66□□□□□ -0.38
PTPRK-212ENST00000434424 RAD21O60216 631 aa12.66□□□□□ -0.38
PTPRK-212ENST00000434424 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-212ENST00000434424 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
PTPRK-212ENST00000434424 GCGRP47871 477 aa12.65□□□□□ -0.38
PTPRK-212ENST00000434424 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-212ENST00000434424 ZNF775Q96BV0 537 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-212ENST00000434424 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
PTPRK-212ENST00000434424 ZNF777Q9ULD5 760 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-212ENST00000434424 SLC27A5Q9Y2P5 690 aa12.64□□□□□ -0.39
PTPRK-212ENST00000434424 FAM187AA6NFU0 413 aa12.63□□□□□ -0.39
PTPRK-212ENST00000434424 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
PTPRK-212ENST00000434424 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
PTPRK-212ENST00000434424 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
PTPRK-212ENST00000434424 PROCA1Q8NCQ7 364 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-212ENST00000434424 CCDC97Q96F63 343 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-212ENST00000434424 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
PTPRK-212ENST00000434424 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
PTPRK-212ENST00000434424 FOXC1Q12948 553 aa12.59□□□□□ -0.39
PTPRK-212ENST00000434424 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
PTPRK-212ENST00000434424 ST8SIA5O15466 376 aa12.58□□□□□ -0.4
PTPRK-212ENST00000434424 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-212ENST00000434424 RPIAP49247 311 aa12.58□□□□□ -0.4
PTPRK-212ENST00000434424 BRICD5Q6PL45 260 aa12.58□□□□□ -0.4
PTPRK-212ENST00000434424 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
PTPRK-212ENST00000434424 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-212ENST00000434424 POM121Q96HA1 1249 aa12.57□□□□□ -0.4
PTPRK-212ENST00000434424 AAASQ9NRG9 546 aa12.57□□□□□ -0.4
PTPRK-212ENST00000434424 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-212ENST00000434424 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-212ENST00000434424 RNF19BQ6ZMZ0 732 aa12.56□□□□□ -0.4
PTPRK-212ENST00000434424 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
PTPRK-212ENST00000434424 TOR4AQ9NXH8 423 aa12.54□□□□□ -0.4
PTPRK-212ENST00000434424 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPRK-212ENST00000434424 MYSM1Q5VVJ2 828 aa12.52□□□□□ -0.41
PTPRK-212ENST00000434424 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
PTPRK-212ENST00000434424 MSS51Q4VC12 460 aa12.51□□□□□ -0.41
PTPRK-212ENST00000434424 BANK1Q8NDB2 785 aa12.51□□□□□ -0.41
PTPRK-212ENST00000434424 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
PTPRK-212ENST00000434424 COG6Q9Y2V7 657 aa12.51□□□□□ -0.41
PTPRK-212ENST00000434424 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
PTPRK-212ENST00000434424 CD46P15529 392 aa12.5□□□□□ -0.41
PTPRK-212ENST00000434424 DACH1Q9UI36 760 aa12.49□□□□□ -0.41
PTPRK-212ENST00000434424 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
PTPRK-212ENST00000434424 AVPP01185 164 aa12.47□□□□□ -0.41
PTPRK-212ENST00000434424 CRIPAKQ8N1N5 446 aa12.47□□□□□ -0.41
PTPRK-212ENST00000434424 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
PTPRK-212ENST00000434424 RFC5P40937 340 aa12.46□□□□□ -0.41
PTPRK-212ENST00000434424 TBC1D2Q9BYX2 928 aa12.46□□□□□ -0.41
PTPRK-212ENST00000434424 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-212ENST00000434424 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
PTPRK-212ENST00000434424 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
PTPRK-212ENST00000434424 MMP16P51512 607 aa12.44□□□□□ -0.42
PTPRK-212ENST00000434424 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
PTPRK-212ENST00000434424 CYP4X1Q8N118 509 aa12.44□□□□□ -0.42
PTPRK-212ENST00000434424 HLA-CQ95604 372 aa12.44□□□□□ -0.42
PTPRK-212ENST00000434424 KDM4AO75164 1064 aa12.42□□□□□ -0.42
PTPRK-212ENST00000434424 Q3C1V9 767 aa12.41□□□□□ -0.42
PTPRK-212ENST00000434424 LCE2AQ5TA79 106 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms