RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 PLEKHH1Q9ULM0 1364 aa28.36■■■□□ 2.13
HLCS-204ENST00000427746 SIRT1Q96EB6 747 aa28.35■■■□□ 2.13
HLCS-204ENST00000427746 LRP6O75581 1613 aa28.35■■■□□ 2.13
HLCS-204ENST00000427746 DDX17Q92841 729 aaKnown RBP28.34■■■□□ 2.13
HLCS-204ENST00000427746 ORAI2Q96SN7 254 aa28.34■■■□□ 2.13
HLCS-204ENST00000427746 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
HLCS-204ENST00000427746 DCAF11Q8TEB1 546 aa28.31■■■□□ 2.12
HLCS-204ENST00000427746 STAC3Q96MF2 364 aa28.31■■■□□ 2.12
HLCS-204ENST00000427746 ADGRB1O14514 1584 aa28.3■■■□□ 2.12
HLCS-204ENST00000427746 LRRC59Q96AG4 307 aaKnown RBP28.3■■■□□ 2.12
HLCS-204ENST00000427746 KDM2AQ9Y2K7 1162 aa28.28■■■□□ 2.12
HLCS-204ENST00000427746 SOS2Q07890 1332 aaPredicted RBP28.26■■■□□ 2.11
HLCS-204ENST00000427746 POTEAQ6S8J7 498 aa28.26■■■□□ 2.11
HLCS-204ENST00000427746 DLC1Q96QB1 1528 aa28.26■■■□□ 2.11
HLCS-204ENST00000427746 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
HLCS-204ENST00000427746 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
HLCS-204ENST00000427746 ESCO1Q5FWF5 840 aa28.23■■■□□ 2.11
HLCS-204ENST00000427746 PRAM1Q96QH2 718 aa28.22■■■□□ 2.11
HLCS-204ENST00000427746 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
HLCS-204ENST00000427746 NUTM2FA1L443 756 aa28.19■■■□□ 2.1
HLCS-204ENST00000427746 NUTM2BA6NNL0 878 aaPredicted RBP28.19■■■□□ 2.1
HLCS-204ENST00000427746 NUTM2EB1AL46 878 aaPredicted RBP28.19■■■□□ 2.1
HLCS-204ENST00000427746 NUTM2AQ8IVF1 878 aaPredicted RBP28.19■■■□□ 2.1
HLCS-204ENST00000427746 NPHP3Q7Z494 1330 aa28.18■■■□□ 2.1
HLCS-204ENST00000427746 PXDNQ92626 1479 aa28.17■■■□□ 2.1
HLCS-204ENST00000427746 SAFB2Q14151 953 aaKnown RBP eCLIP28.15■■■□□ 2.1
HLCS-204ENST00000427746 TRAK1Q9UPV9 953 aa28.15■■■□□ 2.1
HLCS-204ENST00000427746 FOXO3O43524 673 aa28.14■■■□□ 2.1
HLCS-204ENST00000427746 POGKQ9P215 609 aa28.14■■■□□ 2.1
HLCS-204ENST00000427746 ADGRB2O60241 1585 aa28.14■■■□□ 2.1
HLCS-204ENST00000427746 KIF1AQ12756 1690 aa28.12■■■□□ 2.09
HLCS-204ENST00000427746 COL22A1Q8NFW1 1626 aaPredicted RBP28.11■■■□□ 2.09
HLCS-204ENST00000427746 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
HLCS-204ENST00000427746 XPCQ01831 940 aaPredicted RBP28.08■■■□□ 2.09
HLCS-204ENST00000427746 KIAA1210Q9ULL0 1709 aa28.08■■■□□ 2.09
HLCS-204ENST00000427746 RGPD8O14715 1765 aaPredicted RBP28.08■■■□□ 2.09
HLCS-204ENST00000427746 USP32Q8NFA0 1604 aa28.07■■■□□ 2.08
HLCS-204ENST00000427746 AFF2P51816 1311 aa28.06■■■□□ 2.08
HLCS-204ENST00000427746 ANKARQ7Z5J8 1434 aa28.06■■■□□ 2.08
HLCS-204ENST00000427746 ARHGEF28Q8N1W1 1705 aaKnown RBP28.06■■■□□ 2.08
HLCS-204ENST00000427746 PHF8Q9UPP1 1060 aa28.05■■■□□ 2.08
HLCS-204ENST00000427746 HIRIP3Q9BW71 556 aaPredicted RBP28.04■■■□□ 2.08
HLCS-204ENST00000427746 MINK1Q8N4C8 1332 aaPredicted RBP28.03■■■□□ 2.08
HLCS-204ENST00000427746 C8orf37Q96NL8 207 aa28.03■■■□□ 2.08
HLCS-204ENST00000427746 ADAMTS2O95450 1211 aa28.01■■■□□ 2.07
HLCS-204ENST00000427746 KRT28Q7Z3Y7 464 aa28.01■■■□□ 2.07
HLCS-204ENST00000427746 SPATA31A3Q5VYP0 1347 aa28■■■□□ 2.07
HLCS-204ENST00000427746 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
HLCS-204ENST00000427746 WASLO00401 505 aaPredicted RBP27.99■■■□□ 2.07
HLCS-204ENST00000427746 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
HLCS-204ENST00000427746 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
HLCS-204ENST00000427746 EIF3AQ14152 1382 aaKnown RBP27.99■■■□□ 2.07
HLCS-204ENST00000427746 TULP4Q9NRJ4 1543 aa27.98■■■□□ 2.07
HLCS-204ENST00000427746 PRR36Q9H6K5 1346 aa27.98■■■□□ 2.07
HLCS-204ENST00000427746 NGLY1Q96IV0 654 aa27.96■■■□□ 2.07
HLCS-204ENST00000427746 RXRBP28702 533 aa27.94■■■□□ 2.06
HLCS-204ENST00000427746 PSME1Q06323 249 aa27.94■■■□□ 2.06
HLCS-204ENST00000427746 PMFBP1Q8TBY8 1022 aa27.94■■■□□ 2.06
HLCS-204ENST00000427746 SBNO1A3KN83 1393 aa27.94■■■□□ 2.06
HLCS-204ENST00000427746 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
HLCS-204ENST00000427746 CDK12Q9NYV4 1490 aaPredicted RBP27.92■■■□□ 2.06
HLCS-204ENST00000427746 FNBP4Q8N3X1 1017 aaPredicted RBP27.92■■■□□ 2.06
HLCS-204ENST00000427746 TRIM26Q12899 539 aaPredicted RBP27.91■■■□□ 2.06
HLCS-204ENST00000427746 NEUROD1Q13562 356 aa27.91■■■□□ 2.06
HLCS-204ENST00000427746 QTRT2Q9H974 415 aaKnown RBP27.91■■■□□ 2.06
HLCS-204ENST00000427746 MARF1Q9Y4F3 1742 aaKnown RBP27.9■■■□□ 2.06
HLCS-204ENST00000427746 ATP7BP35670 1465 aa27.89■■■□□ 2.06
HLCS-204ENST00000427746 USP21Q9UK80 565 aa27.88■■■□□ 2.05
HLCS-204ENST00000427746 TRPM3Q9HCF6 1732 aaPredicted RBP27.87■■■□□ 2.05
HLCS-204ENST00000427746 RBM6P78332 1123 aaKnown RBP27.86■■■□□ 2.05
HLCS-204ENST00000427746 ARHGEF10O15013 1369 aa27.86■■■□□ 2.05
HLCS-204ENST00000427746 TRPM1Q7Z4N2 1603 aa27.85■■■□□ 2.05
HLCS-204ENST00000427746 NUDT16Q96DE0 195 aaKnown RBP27.85■■■□□ 2.05
HLCS-204ENST00000427746 CDK19Q9BWU1 502 aa27.85■■■□□ 2.05
HLCS-204ENST00000427746 BCL9LQ86UU0 1499 aa27.84■■■□□ 2.05
HLCS-204ENST00000427746 ITSN1Q15811 1721 aa27.84■■■□□ 2.05
HLCS-204ENST00000427746 GPRASP1Q5JY77 1395 aa27.83■■■□□ 2.05
HLCS-204ENST00000427746 TRPC5Q9UL62 973 aaPredicted RBP27.82■■■□□ 2.04
HLCS-204ENST00000427746 CENPJQ9HC77 1338 aaPredicted RBP27.82■■■□□ 2.04
HLCS-204ENST00000427746 ATRNO75882 1429 aa27.82■■■□□ 2.04
HLCS-204ENST00000427746 RGS12O14924 1447 aa27.81■■■□□ 2.04
HLCS-204ENST00000427746 ALS2Q96Q42 1657 aa27.81■■■□□ 2.04
HLCS-204ENST00000427746 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
HLCS-204ENST00000427746 NGDNQ8NEJ9 315 aaKnown RBP27.8■■■□□ 2.04
HLCS-204ENST00000427746 CABLES1Q8TDN4 633 aa27.8■■■□□ 2.04
HLCS-204ENST00000427746 TOPAZ1Q8N9V7 1692 aa27.8■■■□□ 2.04
HLCS-204ENST00000427746 LMOD2Q6P5Q4 547 aa27.79■■■□□ 2.04
HLCS-204ENST00000427746 SLIT2O94813 1529 aa27.78■■■□□ 2.04
HLCS-204ENST00000427746 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
HLCS-204ENST00000427746 QRICH2Q9H0J4 1663 aa27.77■■■□□ 2.04
HLCS-204ENST00000427746 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.75■■■□□ 2.03
HLCS-204ENST00000427746 POLR3AO14802 1390 aaPredicted RBP27.75■■■□□ 2.03
HLCS-204ENST00000427746 NBPF8Q3BBV2 869 aa27.75■■■□□ 2.03
HLCS-204ENST00000427746 ROCK2O75116 1388 aaKnown RBP27.74■■■□□ 2.03
HLCS-204ENST00000427746 PLEKHG3A1L390 1219 aa27.74■■■□□ 2.03
HLCS-204ENST00000427746 HAP1P54257 671 aaPredicted RBP27.74■■■□□ 2.03
HLCS-204ENST00000427746 PLEKHG5O94827 1062 aa27.72■■■□□ 2.03
HLCS-204ENST00000427746 UNC5CLQ8IV45 518 aa27.72■■■□□ 2.03
HLCS-204ENST00000427746 ACEP12821 1306 aa27.71■■■□□ 2.03
HLCS-204ENST00000427746 SRPK2P78362 688 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms