RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 SHROOM2Q13796 1616 aa9.42□□□□□ -0.9
LINC01108-201ENST00000427276 MTHFSP49914 203 aa9.42□□□□□ -0.9
LINC01108-201ENST00000427276 ZKSCAN2Q63HK3 967 aa9.42□□□□□ -0.9
LINC01108-201ENST00000427276 TRMT2AQ8IZ69 625 aaKnown RBP9.42□□□□□ -0.9
LINC01108-201ENST00000427276 CHMP4AQ9BY43 222 aa9.42□□□□□ -0.9
LINC01108-201ENST00000427276 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
LINC01108-201ENST00000427276 CROCC2H7BZ55 1655 aa9.41□□□□□ -0.9
LINC01108-201ENST00000427276 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
LINC01108-201ENST00000427276 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
LINC01108-201ENST00000427276 RBM10P98175 930 aaKnown RBP9.41□□□□□ -0.9
LINC01108-201ENST00000427276 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
LINC01108-201ENST00000427276 ITSN2Q9NZM3 1697 aa9.41□□□□□ -0.9
LINC01108-201ENST00000427276 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
LINC01108-201ENST00000427276 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
LINC01108-201ENST00000427276 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
LINC01108-201ENST00000427276 CFAP53Q96M91 514 aa9.4□□□□□ -0.9
LINC01108-201ENST00000427276 CDC42BPAQ5VT25 1732 aa9.4□□□□□ -0.9
LINC01108-201ENST00000427276 MVPQ14764 893 aaKnown RBP9.4□□□□□ -0.91
LINC01108-201ENST00000427276 GBP4Q96PP9 640 aa9.4□□□□□ -0.91
LINC01108-201ENST00000427276 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.91
LINC01108-201ENST00000427276 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
LINC01108-201ENST00000427276 EXOSC9Q06265 439 aaKnown RBP9.39□□□□□ -0.91
LINC01108-201ENST00000427276 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
LINC01108-201ENST00000427276 GPRASP1Q5JY77 1395 aa9.39□□□□□ -0.91
LINC01108-201ENST00000427276 TRPM1Q7Z4N2 1603 aa9.39□□□□□ -0.91
LINC01108-201ENST00000427276 ERBB4Q15303 1308 aa9.39□□□□□ -0.91
LINC01108-201ENST00000427276 ELL2O00472 640 aaPredicted RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 ANKRD45Q5TZF3 282 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 GAS2L3Q86XJ1 694 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 C1orf115Q9H7X2 142 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 DDX49Q9Y6V7 483 aaKnown RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 WDR7Q9Y4E6 1490 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 FSD2A1L4K1 749 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 MSNP26038 577 aaKnown RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 FOXD4L5Q5VV16 416 aaPredicted RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 FOXD4L4Q8WXT5 416 aaPredicted RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 GOLGA6L22H0YM25 854 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 APBB1O00213 710 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 RRP9O43818 475 aaKnown RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
LINC01108-201ENST00000427276 RBM42Q9BTD8 480 aaKnown RBP9.38□□□□□ -0.91
LINC01108-201ENST00000427276 KIAA1211Q6ZU35 1233 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 FAM13BQ9NYF5 915 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 ATP10BO94823 1461 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 ASXL1Q8IXJ9 1541 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 CCDC141Q6ZP82 1450 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 NOB1Q9ULX3 412 aaKnown RBP9.37□□□□□ -0.91
LINC01108-201ENST00000427276 ABCC10Q5T3U5 1492 aa9.37□□□□□ -0.91
LINC01108-201ENST00000427276 KIF3BO15066 747 aa9.36□□□□□ -0.91
LINC01108-201ENST00000427276 PTPRGP23470 1445 aa9.36□□□□□ -0.91
LINC01108-201ENST00000427276 INSRP06213 1382 aa9.36□□□□□ -0.91
LINC01108-201ENST00000427276 TRIM27P14373 513 aa9.36□□□□□ -0.91
LINC01108-201ENST00000427276 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
LINC01108-201ENST00000427276 TMEM57Q8N5G2 664 aa9.36□□□□□ -0.91
LINC01108-201ENST00000427276 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
LINC01108-201ENST00000427276 A0A0U1RQG5 324 aaPredicted RBP9.35□□□□□ -0.91
LINC01108-201ENST00000427276 SSFA2P28290 1259 aa9.35□□□□□ -0.91
LINC01108-201ENST00000427276 R3HCC1Q9Y3T6 440 aaKnown RBP9.35□□□□□ -0.91
LINC01108-201ENST00000427276 ARHGAP5Q13017 1502 aa9.35□□□□□ -0.91
LINC01108-201ENST00000427276 PIK3C2GO75747 1445 aa9.35□□□□□ -0.91
LINC01108-201ENST00000427276 MCTP1Q6DN14 999 aa9.34□□□□□ -0.91
LINC01108-201ENST00000427276 DDX19BQ9UMR2 479 aa9.34□□□□□ -0.91
LINC01108-201ENST00000427276 ADGRF5Q8IZF2 1346 aa9.34□□□□□ -0.91
LINC01108-201ENST00000427276 PRDM15P57071 1507 aaPredicted RBP9.34□□□□□ -0.91
LINC01108-201ENST00000427276 CAVIN1Q6NZI2 390 aaKnown RBP9.34□□□□□ -0.91
LINC01108-201ENST00000427276 MPNDQ8N594 471 aa9.34□□□□□ -0.91
LINC01108-201ENST00000427276 ADCY10Q96PN6 1610 aa9.34□□□□□ -0.91
LINC01108-201ENST00000427276 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
LINC01108-201ENST00000427276 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
LINC01108-201ENST00000427276 BCL11BQ9C0K0 894 aaPredicted RBP9.33□□□□□ -0.92
LINC01108-201ENST00000427276 STK26Q9P289 416 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 SHANK2Q9UPX8 1470 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 WDR63Q8IWG1 891 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 GGNBP2Q9H3C7 697 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 SPAG9O60271 1321 aaKnown RBP9.33□□□□□ -0.92
LINC01108-201ENST00000427276 NINLQ9Y2I6 1382 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 SYCP2Q9BX26 1530 aa9.33□□□□□ -0.92
LINC01108-201ENST00000427276 CD2BP2O95400 341 aaKnown RBP9.32□□□□□ -0.92
LINC01108-201ENST00000427276 NGEFQ8N5V2 710 aa9.32□□□□□ -0.92
LINC01108-201ENST00000427276 KIF13AQ9H1H9 1805 aa9.32□□□□□ -0.92
LINC01108-201ENST00000427276 RIPK4P57078 832 aa9.32□□□□□ -0.92
LINC01108-201ENST00000427276 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
LINC01108-201ENST00000427276 SCAF11Q99590 1463 aaKnown RBP9.32□□□□□ -0.92
LINC01108-201ENST00000427276 NLRP1Q9C000 1473 aa9.32□□□□□ -0.92
LINC01108-201ENST00000427276 EFCAB2Q5VUJ9 269 aa9.31□□□□□ -0.92
LINC01108-201ENST00000427276 NOL8Q76FK4 1167 aaKnown RBP9.31□□□□□ -0.92
LINC01108-201ENST00000427276 PTMAP06454 111 aaKnown RBP9.31□□□□□ -0.92
LINC01108-201ENST00000427276 XPCQ01831 940 aaPredicted RBP9.31□□□□□ -0.92
LINC01108-201ENST00000427276 SKOR2Q2VWA4 1001 aaPredicted RBP9.31□□□□□ -0.92
LINC01108-201ENST00000427276 DNTTIP2Q5QJE6 756 aaKnown RBP9.31□□□□□ -0.92
LINC01108-201ENST00000427276 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
LINC01108-201ENST00000427276 CABP2Q9NPB3 220 aa9.31□□□□□ -0.92
LINC01108-201ENST00000427276 SAMD9LQ8IVG5 1584 aa9.31□□□□□ -0.92
LINC01108-201ENST00000427276 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
LINC01108-201ENST00000427276 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
LINC01108-201ENST00000427276 IPO8O15397 1037 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms