RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 RGS17Q9UGC6 210 aaPredicted RBP33.27■■■□□ 2.92
SEMA3C-204ENST00000427167 CDC42BPGQ6DT37 1551 aa33.26■■■□□ 2.92
SEMA3C-204ENST00000427167 SHPRHQ149N8 1683 aa33.26■■■□□ 2.91
SEMA3C-204ENST00000427167 ORAI2Q96SN7 254 aa33.25■■■□□ 2.91
SEMA3C-204ENST00000427167 DHX57Q6P158 1386 aaKnown RBP33.24■■■□□ 2.91
SEMA3C-204ENST00000427167 SPATA31A6Q5VVP1 1343 aa33.24■■■□□ 2.91
SEMA3C-204ENST00000427167 LRP6O75581 1613 aa33.21■■■□□ 2.91
SEMA3C-204ENST00000427167 NUTM2FA1L443 756 aa33.19■■■□□ 2.9
SEMA3C-204ENST00000427167 MEX3CQ5U5Q3 659 aaKnown RBP33.19■■■□□ 2.9
SEMA3C-204ENST00000427167 LRRC59Q96AG4 307 aaKnown RBP33.18■■■□□ 2.9
SEMA3C-204ENST00000427167 NUTM2BA6NNL0 878 aaPredicted RBP33.17■■■□□ 2.9
SEMA3C-204ENST00000427167 NUTM2EB1AL46 878 aaPredicted RBP33.17■■■□□ 2.9
SEMA3C-204ENST00000427167 NUTM2AQ8IVF1 878 aaPredicted RBP33.17■■■□□ 2.9
SEMA3C-204ENST00000427167 ESCO1Q5FWF5 840 aa33.16■■■□□ 2.9
SEMA3C-204ENST00000427167 SAFB2Q14151 953 aaKnown RBP eCLIP33.15■■■□□ 2.9
SEMA3C-204ENST00000427167 SIRT1Q96EB6 747 aa33.14■■■□□ 2.9
SEMA3C-204ENST00000427167 ADGRB1O14514 1584 aa33.13■■■□□ 2.89
SEMA3C-204ENST00000427167 PRAM1Q96QH2 718 aa33.13■■■□□ 2.89
SEMA3C-204ENST00000427167 POTEAQ6S8J7 498 aa33.12■■■□□ 2.89
SEMA3C-204ENST00000427167 STAC3Q96MF2 364 aa33.11■■■□□ 2.89
SEMA3C-204ENST00000427167 POGKQ9P215 609 aa33.1■■■□□ 2.89
SEMA3C-204ENST00000427167 FMN2Q9NZ56 1722 aa33.1■■■□□ 2.89
SEMA3C-204ENST00000427167 PNPLA6Q8IY17 1366 aa33.09■■■□□ 2.89
SEMA3C-204ENST00000427167 TRAK1Q9UPV9 953 aa33.09■■■□□ 2.89
SEMA3C-204ENST00000427167 DLC1Q96QB1 1528 aa33.08■■■□□ 2.89
SEMA3C-204ENST00000427167 SOS2Q07890 1332 aaPredicted RBP33.08■■■□□ 2.89
SEMA3C-204ENST00000427167 NPHP3Q7Z494 1330 aa33.04■■■□□ 2.88
SEMA3C-204ENST00000427167 FOXO3O43524 673 aa33.04■■■□□ 2.88
SEMA3C-204ENST00000427167 XPCQ01831 940 aaPredicted RBP33.03■■■□□ 2.88
SEMA3C-204ENST00000427167 PXDNQ92626 1479 aa32.99■■■□□ 2.87
SEMA3C-204ENST00000427167 RGPD8O14715 1765 aaPredicted RBP32.97■■■□□ 2.87
SEMA3C-204ENST00000427167 ZNF772Q68DY9 489 aaPredicted RBP32.97■■■□□ 2.87
SEMA3C-204ENST00000427167 HIRIP3Q9BW71 556 aaPredicted RBP32.97■■■□□ 2.87
SEMA3C-204ENST00000427167 KIF1AQ12756 1690 aa32.96■■■□□ 2.87
SEMA3C-204ENST00000427167 MINK1Q8N4C8 1332 aaPredicted RBP32.96■■■□□ 2.87
SEMA3C-204ENST00000427167 C8orf37Q96NL8 207 aa32.95■■■□□ 2.87
SEMA3C-204ENST00000427167 ADAMTS2O95450 1211 aa32.94■■■□□ 2.86
SEMA3C-204ENST00000427167 ADGRB2O60241 1585 aa32.94■■■□□ 2.86
SEMA3C-204ENST00000427167 SIN3AQ96ST3 1273 aa32.92■■■□□ 2.86
SEMA3C-204ENST00000427167 AFF2P51816 1311 aa32.92■■■□□ 2.86
SEMA3C-204ENST00000427167 PHF8Q9UPP1 1060 aa32.91■■■□□ 2.86
SEMA3C-204ENST00000427167 ARHGEF28Q8N1W1 1705 aaKnown RBP32.91■■■□□ 2.86
SEMA3C-204ENST00000427167 KIAA1210Q9ULL0 1709 aa32.89■■■□□ 2.86
SEMA3C-204ENST00000427167 COL22A1Q8NFW1 1626 aaPredicted RBP32.89■■■□□ 2.86
SEMA3C-204ENST00000427167 NEUROD1Q13562 356 aa32.89■■■□□ 2.86
SEMA3C-204ENST00000427167 USP32Q8NFA0 1604 aa32.88■■■□□ 2.85
SEMA3C-204ENST00000427167 KRT28Q7Z3Y7 464 aa32.87■■■□□ 2.85
SEMA3C-204ENST00000427167 ANKARQ7Z5J8 1434 aa32.86■■■□□ 2.85
SEMA3C-204ENST00000427167 NBPF1Q3BBV0 1214 aa32.85■■■□□ 2.85
SEMA3C-204ENST00000427167 L3MBTL2Q969R5 705 aa32.85■■■□□ 2.85
SEMA3C-204ENST00000427167 NGLY1Q96IV0 654 aa32.85■■■□□ 2.85
SEMA3C-204ENST00000427167 PMFBP1Q8TBY8 1022 aa32.84■■■□□ 2.85
SEMA3C-204ENST00000427167 WASLO00401 505 aaPredicted RBP32.83■■■□□ 2.85
SEMA3C-204ENST00000427167 EIF3AQ14152 1382 aaKnown RBP32.82■■■□□ 2.84
SEMA3C-204ENST00000427167 SPATA31A3Q5VYP0 1347 aa32.81■■■□□ 2.84
SEMA3C-204ENST00000427167 TRIM26Q12899 539 aaPredicted RBP32.81■■■□□ 2.84
SEMA3C-204ENST00000427167 TULP4Q9NRJ4 1543 aa32.81■■■□□ 2.84
SEMA3C-204ENST00000427167 PRR36Q9H6K5 1346 aa32.79■■■□□ 2.84
SEMA3C-204ENST00000427167 PSME1Q06323 249 aa32.79■■■□□ 2.84
SEMA3C-204ENST00000427167 RXRBP28702 533 aa32.78■■■□□ 2.84
SEMA3C-204ENST00000427167 TNS3Q68CZ2 1445 aa32.76■■■□□ 2.83
SEMA3C-204ENST00000427167 PLEKHG5O94827 1062 aa32.75■■■□□ 2.83
SEMA3C-204ENST00000427167 LMOD2Q6P5Q4 547 aa32.75■■■□□ 2.83
SEMA3C-204ENST00000427167 QTRT2Q9H974 415 aaKnown RBP32.74■■■□□ 2.83
SEMA3C-204ENST00000427167 USP21Q9UK80 565 aa32.72■■■□□ 2.83
SEMA3C-204ENST00000427167 SBNO1A3KN83 1393 aa32.71■■■□□ 2.83
SEMA3C-204ENST00000427167 CDK19Q9BWU1 502 aa32.7■■■□□ 2.83
SEMA3C-204ENST00000427167 MARF1Q9Y4F3 1742 aaKnown RBP32.7■■■□□ 2.83
SEMA3C-204ENST00000427167 ATP7BP35670 1465 aa32.69■■■□□ 2.82
SEMA3C-204ENST00000427167 HAP1P54257 671 aaPredicted RBP32.69■■■□□ 2.82
SEMA3C-204ENST00000427167 GPRASP1Q5JY77 1395 aa32.69■■■□□ 2.82
SEMA3C-204ENST00000427167 NGDNQ8NEJ9 315 aaKnown RBP32.68■■■□□ 2.82
SEMA3C-204ENST00000427167 NUDT16Q96DE0 195 aaKnown RBP32.68■■■□□ 2.82
SEMA3C-204ENST00000427167 TRPM1Q7Z4N2 1603 aa32.67■■■□□ 2.82
SEMA3C-204ENST00000427167 FNBP4Q8N3X1 1017 aaPredicted RBP32.67■■■□□ 2.82
SEMA3C-204ENST00000427167 CABLES1Q8TDN4 633 aa32.67■■■□□ 2.82
SEMA3C-204ENST00000427167 ITSN1Q15811 1721 aa32.66■■■□□ 2.82
SEMA3C-204ENST00000427167 CENPJQ9HC77 1338 aaPredicted RBP32.66■■■□□ 2.82
SEMA3C-204ENST00000427167 ARHGEF10O15013 1369 aa32.66■■■□□ 2.82
SEMA3C-204ENST00000427167 RBM6P78332 1123 aaKnown RBP32.65■■■□□ 2.82
SEMA3C-204ENST00000427167 TRPM3Q9HCF6 1732 aaPredicted RBP32.63■■■□□ 2.81
SEMA3C-204ENST00000427167 CDK12Q9NYV4 1490 aaPredicted RBP32.63■■■□□ 2.81
SEMA3C-204ENST00000427167 ROCK2O75116 1388 aaKnown RBP32.62■■■□□ 2.81
SEMA3C-204ENST00000427167 TRPC5Q9UL62 973 aaPredicted RBP32.62■■■□□ 2.81
SEMA3C-204ENST00000427167 QRICH2Q9H0J4 1663 aa32.62■■■□□ 2.81
SEMA3C-204ENST00000427167 RGS12O14924 1447 aa32.6■■■□□ 2.81
SEMA3C-204ENST00000427167 PAK3O75914 559 aaPredicted RBP32.59■■■□□ 2.81
SEMA3C-204ENST00000427167 ABCA3Q99758 1704 aa32.59■■■□□ 2.81
SEMA3C-204ENST00000427167 SRPK2P78362 688 aaKnown RBP32.58■■■□□ 2.81
SEMA3C-204ENST00000427167 BCL9LQ86UU0 1499 aa32.58■■■□□ 2.81
SEMA3C-204ENST00000427167 TOPAZ1Q8N9V7 1692 aa32.57■■■□□ 2.8
SEMA3C-204ENST00000427167 ATRNO75882 1429 aa32.57■■■□□ 2.8
SEMA3C-204ENST00000427167 TONSLQ96HA7 1378 aa32.57■■■□□ 2.8
SEMA3C-204ENST00000427167 ALS2Q96Q42 1657 aa32.56■■■□□ 2.8
SEMA3C-204ENST00000427167 NBPF8Q3BBV2 869 aa32.56■■■□□ 2.8
SEMA3C-204ENST00000427167 CCDC61Q9Y6R9 512 aa32.56■■■□□ 2.8
SEMA3C-204ENST00000427167 CABP2Q9NPB3 220 aa32.54■■■□□ 2.8
SEMA3C-204ENST00000427167 ACEP12821 1306 aa32.51■■■□□ 2.8
SEMA3C-204ENST00000427167 SLIT2O94813 1529 aa32.51■■■□□ 2.8
SEMA3C-204ENST00000427167 UNC5CLQ8IV45 518 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms