RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 DHX57Q6P158 1386 aaKnown RBP34.7■■■■□ 3.15
VDAC1-204ENST00000425992 ADGRB1O14514 1584 aa34.66■■■■□ 3.14
VDAC1-204ENST00000425992 DDX17Q92841 729 aaKnown RBP34.64■■■■□ 3.14
VDAC1-204ENST00000425992 SIRT1Q96EB6 747 aa34.62■■■■□ 3.13
VDAC1-204ENST00000425992 ORAI2Q96SN7 254 aa34.62■■■■□ 3.13
VDAC1-204ENST00000425992 FMN2Q9NZ56 1722 aa34.61■■■■□ 3.13
VDAC1-204ENST00000425992 STAC3Q96MF2 364 aa34.61■■■■□ 3.13
VDAC1-204ENST00000425992 RGS17Q9UGC6 210 aaPredicted RBP34.59■■■■□ 3.13
VDAC1-204ENST00000425992 DLC1Q96QB1 1528 aa34.59■■■■□ 3.13
VDAC1-204ENST00000425992 LRP6O75581 1613 aa34.58■■■■□ 3.13
VDAC1-204ENST00000425992 SPATA31A6Q5VVP1 1343 aa34.56■■■■□ 3.12
VDAC1-204ENST00000425992 PRAM1Q96QH2 718 aa34.54■■■■□ 3.12
VDAC1-204ENST00000425992 RGPD8O14715 1765 aaPredicted RBP34.53■■■■□ 3.12
VDAC1-204ENST00000425992 NUTM2FA1L443 756 aa34.52■■■■□ 3.12
VDAC1-204ENST00000425992 SOCS7O14512 581 aa34.52■■■■□ 3.12
VDAC1-204ENST00000425992 SAFB2Q14151 953 aaKnown RBP eCLIP34.51■■■■□ 3.12
VDAC1-204ENST00000425992 LRRC59Q96AG4 307 aaKnown RBP34.51■■■■□ 3.12
VDAC1-204ENST00000425992 ESCO1Q5FWF5 840 aa34.5■■■■□ 3.11
VDAC1-204ENST00000425992 TRAK1Q9UPV9 953 aa34.5■■■■□ 3.11
VDAC1-204ENST00000425992 KIAA1210Q9ULL0 1709 aa34.5■■■■□ 3.11
VDAC1-204ENST00000425992 SOS2Q07890 1332 aaPredicted RBP34.48■■■■□ 3.11
VDAC1-204ENST00000425992 ARHGEF28Q8N1W1 1705 aaKnown RBP34.47■■■■□ 3.11
VDAC1-204ENST00000425992 POGKQ9P215 609 aa34.47■■■■□ 3.11
VDAC1-204ENST00000425992 PNPLA6Q8IY17 1366 aa34.47■■■■□ 3.11
VDAC1-204ENST00000425992 ADGRB2O60241 1585 aa34.45■■■■□ 3.11
VDAC1-204ENST00000425992 KIF1AQ12756 1690 aa34.44■■■■□ 3.1
VDAC1-204ENST00000425992 NUTM2BA6NNL0 878 aaPredicted RBP34.43■■■■□ 3.1
VDAC1-204ENST00000425992 NUTM2EB1AL46 878 aaPredicted RBP34.43■■■■□ 3.1
VDAC1-204ENST00000425992 NUTM2AQ8IVF1 878 aaPredicted RBP34.43■■■■□ 3.1
VDAC1-204ENST00000425992 TRIM26Q12899 539 aaPredicted RBP34.42■■■■□ 3.1
VDAC1-204ENST00000425992 MEX3CQ5U5Q3 659 aaKnown RBP34.42■■■■□ 3.1
VDAC1-204ENST00000425992 SIN3AQ96ST3 1273 aa34.42■■■■□ 3.1
VDAC1-204ENST00000425992 PXDNQ92626 1479 aa34.41■■■■□ 3.1
VDAC1-204ENST00000425992 NPHP3Q7Z494 1330 aa34.41■■■■□ 3.1
VDAC1-204ENST00000425992 POTEAQ6S8J7 498 aa34.41■■■■□ 3.1
VDAC1-204ENST00000425992 USP32Q8NFA0 1604 aa34.4■■■■□ 3.1
VDAC1-204ENST00000425992 FOXO3O43524 673 aa34.39■■■■□ 3.1
VDAC1-204ENST00000425992 XPCQ01831 940 aaPredicted RBP34.36■■■■□ 3.09
VDAC1-204ENST00000425992 COL22A1Q8NFW1 1626 aaPredicted RBP34.36■■■■□ 3.09
VDAC1-204ENST00000425992 MINK1Q8N4C8 1332 aaPredicted RBP34.35■■■■□ 3.09
VDAC1-204ENST00000425992 L3MBTL2Q969R5 705 aa34.35■■■■□ 3.09
VDAC1-204ENST00000425992 HIRIP3Q9BW71 556 aaPredicted RBP34.35■■■■□ 3.09
VDAC1-204ENST00000425992 NEUROD1Q13562 356 aa34.33■■■■□ 3.09
VDAC1-204ENST00000425992 NBPF1Q3BBV0 1214 aa34.32■■■■□ 3.08
VDAC1-204ENST00000425992 ANKARQ7Z5J8 1434 aa34.3■■■■□ 3.08
VDAC1-204ENST00000425992 PHF8Q9UPP1 1060 aa34.29■■■■□ 3.08
VDAC1-204ENST00000425992 TULP4Q9NRJ4 1543 aa34.26■■■■□ 3.08
VDAC1-204ENST00000425992 TRPM1Q7Z4N2 1603 aa34.26■■■■□ 3.07
VDAC1-204ENST00000425992 WASLO00401 505 aaPredicted RBP34.24■■■■□ 3.07
VDAC1-204ENST00000425992 ZNF772Q68DY9 489 aaPredicted RBP34.23■■■■□ 3.07
VDAC1-204ENST00000425992 KRT28Q7Z3Y7 464 aa34.23■■■■□ 3.07
VDAC1-204ENST00000425992 AFF2P51816 1311 aa34.23■■■■□ 3.07
VDAC1-204ENST00000425992 PRR36Q9H6K5 1346 aa34.23■■■■□ 3.07
VDAC1-204ENST00000425992 EIF3AQ14152 1382 aaKnown RBP34.23■■■■□ 3.07
VDAC1-204ENST00000425992 MARF1Q9Y4F3 1742 aaKnown RBP34.21■■■■□ 3.07
VDAC1-204ENST00000425992 ADAMTS2O95450 1211 aa34.21■■■■□ 3.07
VDAC1-204ENST00000425992 C8orf37Q96NL8 207 aa34.21■■■■□ 3.07
VDAC1-204ENST00000425992 ITSN1Q15811 1721 aa34.19■■■■□ 3.06
VDAC1-204ENST00000425992 PMFBP1Q8TBY8 1022 aa34.19■■■■□ 3.06
VDAC1-204ENST00000425992 SPATA31A3Q5VYP0 1347 aa34.19■■■■□ 3.06
VDAC1-204ENST00000425992 QRICH2Q9H0J4 1663 aa34.15■■■■□ 3.06
VDAC1-204ENST00000425992 TRPM3Q9HCF6 1732 aaPredicted RBP34.15■■■■□ 3.06
VDAC1-204ENST00000425992 ATP7BP35670 1465 aa34.14■■■■□ 3.06
VDAC1-204ENST00000425992 TNS3Q68CZ2 1445 aa34.14■■■■□ 3.06
VDAC1-204ENST00000425992 PSME1Q06323 249 aa34.13■■■■□ 3.05
VDAC1-204ENST00000425992 NGLY1Q96IV0 654 aa34.12■■■■□ 3.05
VDAC1-204ENST00000425992 SBNO1A3KN83 1393 aa34.11■■■■□ 3.05
VDAC1-204ENST00000425992 TOPAZ1Q8N9V7 1692 aa34.11■■■■□ 3.05
VDAC1-204ENST00000425992 CDK19Q9BWU1 502 aa34.1■■■■□ 3.05
VDAC1-204ENST00000425992 CENPJQ9HC77 1338 aaPredicted RBP34.09■■■■□ 3.05
VDAC1-204ENST00000425992 ABCA3Q99758 1704 aa34.09■■■■□ 3.05
VDAC1-204ENST00000425992 NUDT16Q96DE0 195 aaKnown RBP34.08■■■■□ 3.05
VDAC1-204ENST00000425992 NBPF8Q3BBV2 869 aa34.07■■■■□ 3.04
VDAC1-204ENST00000425992 ALS2Q96Q42 1657 aa34.06■■■■□ 3.04
VDAC1-204ENST00000425992 ROCK2O75116 1388 aaKnown RBP34.06■■■■□ 3.04
VDAC1-204ENST00000425992 RXRBP28702 533 aa34.04■■■■□ 3.04
VDAC1-204ENST00000425992 GPRASP1Q5JY77 1395 aa34.03■■■■□ 3.04
VDAC1-204ENST00000425992 TONSLQ96HA7 1378 aa34.03■■■■□ 3.04
VDAC1-204ENST00000425992 QTRT2Q9H974 415 aaKnown RBP34.03■■■■□ 3.04
VDAC1-204ENST00000425992 ARHGEF10O15013 1369 aa34.02■■■■□ 3.04
VDAC1-204ENST00000425992 LMOD2Q6P5Q4 547 aa34.02■■■■□ 3.04
VDAC1-204ENST00000425992 NGDNQ8NEJ9 315 aaKnown RBP34.02■■■■□ 3.04
VDAC1-204ENST00000425992 FNBP4Q8N3X1 1017 aaPredicted RBP34.01■■■■□ 3.03
VDAC1-204ENST00000425992 USP21Q9UK80 565 aa34.01■■■■□ 3.03
VDAC1-204ENST00000425992 CABLES1Q8TDN4 633 aa33.99■■■■□ 3.03
VDAC1-204ENST00000425992 PLEKHG5O94827 1062 aa33.98■■■■□ 3.03
VDAC1-204ENST00000425992 CDK12Q9NYV4 1490 aaPredicted RBP33.97■■■■□ 3.03
VDAC1-204ENST00000425992 CCDC61Q9Y6R9 512 aa33.96■■■■□ 3.03
VDAC1-204ENST00000425992 BCL9LQ86UU0 1499 aa33.95■■■■□ 3.02
VDAC1-204ENST00000425992 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.94■■■■□ 3.02
VDAC1-204ENST00000425992 CRYBG1Q9Y4K1 1723 aa33.94■■■■□ 3.02
VDAC1-204ENST00000425992 RBM6P78332 1123 aaKnown RBP33.94■■■■□ 3.02
VDAC1-204ENST00000425992 SRPK2P78362 688 aaKnown RBP33.94■■■■□ 3.02
VDAC1-204ENST00000425992 HAP1P54257 671 aaPredicted RBP33.93■■■■□ 3.02
VDAC1-204ENST00000425992 CABP2Q9NPB3 220 aa33.93■■■■□ 3.02
VDAC1-204ENST00000425992 POLR3AO14802 1390 aaPredicted RBP33.93■■■■□ 3.02
VDAC1-204ENST00000425992 ATRNO75882 1429 aa33.93■■■■□ 3.02
VDAC1-204ENST00000425992 RALGAPBQ86X10 1494 aa33.92■■■■□ 3.02
VDAC1-204ENST00000425992 PLCH1Q4KWH8 1693 aa33.91■■■■□ 3.02
VDAC1-204ENST00000425992 ACEP12821 1306 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms