RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
VPS37A-202ENST00000425020 WAPLQ7Z5K2 1190 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS37A-202ENST00000425020 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
VPS37A-202ENST00000425020 ATF7IPQ6VMQ6 1270 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 PLEKHH2Q8IVE3 1493 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
VPS37A-202ENST00000425020 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
VPS37A-202ENST00000425020 SULT6B1Q6IMI4 303 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 CDK19Q9BWU1 502 aa12.62□□□□□ -0.39
VPS37A-202ENST00000425020 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
VPS37A-202ENST00000425020 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
VPS37A-202ENST00000425020 GNAI1P63096 354 aa12.61□□□□□ -0.39
VPS37A-202ENST00000425020 API5Q9BZZ5 524 aaKnown RBP12.6□□□□□ -0.39
VPS37A-202ENST00000425020 EID1Q9Y6B2 187 aa12.6□□□□□ -0.39
VPS37A-202ENST00000425020 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
VPS37A-202ENST00000425020 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
VPS37A-202ENST00000425020 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
VPS37A-202ENST00000425020 TEFQ10587 303 aa12.58□□□□□ -0.39
VPS37A-202ENST00000425020 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.39
VPS37A-202ENST00000425020 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
VPS37A-202ENST00000425020 FOSBP53539 338 aa12.58□□□□□ -0.4
VPS37A-202ENST00000425020 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
VPS37A-202ENST00000425020 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
VPS37A-202ENST00000425020 NLRP6P59044 892 aa12.57□□□□□ -0.4
VPS37A-202ENST00000425020 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
VPS37A-202ENST00000425020 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
VPS37A-202ENST00000425020 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
VPS37A-202ENST00000425020 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
VPS37A-202ENST00000425020 TESK2Q96S53 571 aa12.57□□□□□ -0.4
VPS37A-202ENST00000425020 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
VPS37A-202ENST00000425020 NEK4P51957 841 aa12.57□□□□□ -0.4
VPS37A-202ENST00000425020 HSP90AA2PQ14568 343 aaPredicted RBP12.56□□□□□ -0.4
VPS37A-202ENST00000425020 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
VPS37A-202ENST00000425020 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
VPS37A-202ENST00000425020 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
VPS37A-202ENST00000425020 SEC24BO95487 1268 aa12.56□□□□□ -0.4
VPS37A-202ENST00000425020 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
VPS37A-202ENST00000425020 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
VPS37A-202ENST00000425020 SMARCA5O60264 1052 aaPredicted RBP12.55□□□□□ -0.4
VPS37A-202ENST00000425020 REC8O95072 547 aa12.55□□□□□ -0.4
VPS37A-202ENST00000425020 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
VPS37A-202ENST00000425020 DHX29Q7Z478 1369 aaKnown RBP12.55□□□□□ -0.4
VPS37A-202ENST00000425020 PER1O15534 1290 aaPredicted RBP12.55□□□□□ -0.4
VPS37A-202ENST00000425020 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
VPS37A-202ENST00000425020 MCM10Q7L590 875 aa12.55□□□□□ -0.4
VPS37A-202ENST00000425020 VPS37CA5D8V6 355 aaPredicted RBP12.55□□□□□ -0.4
VPS37A-202ENST00000425020 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
VPS37A-202ENST00000425020 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
VPS37A-202ENST00000425020 FAM13BQ9NYF5 915 aa12.55□□□□□ -0.4
VPS37A-202ENST00000425020 RLBP1P12271 317 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 TRIM27P14373 513 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 CHD1LQ86WJ1 897 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 PLEKHH1Q9ULM0 1364 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 CDC45O75419 566 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
VPS37A-202ENST00000425020 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
VPS37A-202ENST00000425020 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 NPHP1O15259 732 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
VPS37A-202ENST00000425020 MCM4P33991 863 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 CHAF1AQ13111 956 aaPredicted RBP12.53□□□□□ -0.4
VPS37A-202ENST00000425020 IDI1Q13907 227 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 NME9Q86XW9 330 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 SYAP1Q96A49 352 aaPredicted RBP12.53□□□□□ -0.4
VPS37A-202ENST00000425020 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
VPS37A-202ENST00000425020 UGGT2Q9NYU1 1516 aa12.52□□□□□ -0.41
VPS37A-202ENST00000425020 GNL2Q13823 731 aaKnown RBP12.52□□□□□ -0.41
VPS37A-202ENST00000425020 F6X3S4 739 aa12.52□□□□□ -0.41
VPS37A-202ENST00000425020 CARD14Q9BXL6 1004 aa12.52□□□□□ -0.41
VPS37A-202ENST00000425020 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
VPS37A-202ENST00000425020 NUP153P49790 1475 aaKnown RBP12.51□□□□□ -0.41
VPS37A-202ENST00000425020 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
VPS37A-202ENST00000425020 NASPP49321 788 aaPredicted RBP12.51□□□□□ -0.41
VPS37A-202ENST00000425020 TSHZ3Q63HK5 1081 aa12.51□□□□□ -0.41
VPS37A-202ENST00000425020 KDM4AO75164 1064 aa12.5□□□□□ -0.41
VPS37A-202ENST00000425020 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
VPS37A-202ENST00000425020 C8orf34Q49A92 452 aa12.5□□□□□ -0.41
VPS37A-202ENST00000425020 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
VPS37A-202ENST00000425020 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
VPS37A-202ENST00000425020 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
VPS37A-202ENST00000425020 CUL7Q14999 1698 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 PSME1Q06323 249 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
VPS37A-202ENST00000425020 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms