RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
CTSA-205ENST00000419493 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
CTSA-205ENST00000419493 MEX3CQ5U5Q3 659 aaKnown RBP13.99□□□□□ -0.17
CTSA-205ENST00000419493 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
CTSA-205ENST00000419493 SIRT1Q96EB6 747 aa13.99□□□□□ -0.17
CTSA-205ENST00000419493 PRAM1Q96QH2 718 aa13.99□□□□□ -0.17
CTSA-205ENST00000419493 ASXL1Q8IXJ9 1541 aa13.99□□□□□ -0.17
CTSA-205ENST00000419493 TECPR2O15040 1411 aa13.98□□□□□ -0.17
CTSA-205ENST00000419493 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
CTSA-205ENST00000419493 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
CTSA-205ENST00000419493 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
CTSA-205ENST00000419493 LAMC1P11047 1609 aa13.97□□□□□ -0.17
CTSA-205ENST00000419493 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
CTSA-205ENST00000419493 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
CTSA-205ENST00000419493 AHDC1Q5TGY3 1603 aaPredicted RBP13.97□□□□□ -0.17
CTSA-205ENST00000419493 SPATA31A6Q5VVP1 1343 aa13.96□□□□□ -0.17
CTSA-205ENST00000419493 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
CTSA-205ENST00000419493 FOXO3O43524 673 aa13.94□□□□□ -0.18
CTSA-205ENST00000419493 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
CTSA-205ENST00000419493 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
CTSA-205ENST00000419493 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
CTSA-205ENST00000419493 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
CTSA-205ENST00000419493 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
CTSA-205ENST00000419493 SOCS7O14512 581 aa13.92□□□□□ -0.18
CTSA-205ENST00000419493 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
CTSA-205ENST00000419493 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
CTSA-205ENST00000419493 NHSL1Q5SYE7 1610 aa13.91□□□□□ -0.18
CTSA-205ENST00000419493 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.18
CTSA-205ENST00000419493 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
CTSA-205ENST00000419493 NBPF1Q3BBV0 1214 aa13.89□□□□□ -0.19
CTSA-205ENST00000419493 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
CTSA-205ENST00000419493 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
CTSA-205ENST00000419493 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
CTSA-205ENST00000419493 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
CTSA-205ENST00000419493 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
CTSA-205ENST00000419493 POTEAQ6S8J7 498 aa13.88□□□□□ -0.19
CTSA-205ENST00000419493 LRP6O75581 1613 aa13.87□□□□□ -0.19
CTSA-205ENST00000419493 PSME1Q06323 249 aa13.87□□□□□ -0.19
CTSA-205ENST00000419493 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
CTSA-205ENST00000419493 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
CTSA-205ENST00000419493 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
CTSA-205ENST00000419493 C8orf37Q96NL8 207 aa13.87□□□□□ -0.19
CTSA-205ENST00000419493 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
CTSA-205ENST00000419493 WASLO00401 505 aaPredicted RBP13.86□□□□□ -0.19
CTSA-205ENST00000419493 LMOD2Q6P5Q4 547 aa13.86□□□□□ -0.19
CTSA-205ENST00000419493 NGLY1Q96IV0 654 aa13.85□□□□□ -0.19
CTSA-205ENST00000419493 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
CTSA-205ENST00000419493 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
CTSA-205ENST00000419493 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.19
CTSA-205ENST00000419493 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.19
CTSA-205ENST00000419493 AFF2P51816 1311 aa13.83□□□□□ -0.2
CTSA-205ENST00000419493 TONSLQ96HA7 1378 aa13.83□□□□□ -0.2
CTSA-205ENST00000419493 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
CTSA-205ENST00000419493 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
CTSA-205ENST00000419493 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
CTSA-205ENST00000419493 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
CTSA-205ENST00000419493 PXDNQ92626 1479 aa13.81□□□□□ -0.2
CTSA-205ENST00000419493 NUDT16Q96DE0 195 aaKnown RBP13.81□□□□□ -0.2
CTSA-205ENST00000419493 SPATA31A3Q5VYP0 1347 aa13.81□□□□□ -0.2
CTSA-205ENST00000419493 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
CTSA-205ENST00000419493 KIF1AQ12756 1690 aa13.81□□□□□ -0.2
CTSA-205ENST00000419493 ROCK2O75116 1388 aaKnown RBP13.81□□□□□ -0.2
CTSA-205ENST00000419493 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
CTSA-205ENST00000419493 RXRBP28702 533 aa13.8□□□□□ -0.2
CTSA-205ENST00000419493 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
CTSA-205ENST00000419493 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
CTSA-205ENST00000419493 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
CTSA-205ENST00000419493 ADGRB2O60241 1585 aa13.79□□□□□ -0.2
CTSA-205ENST00000419493 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
CTSA-205ENST00000419493 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
CTSA-205ENST00000419493 QTRT2Q9H974 415 aaKnown RBP13.79□□□□□ -0.2
CTSA-205ENST00000419493 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
CTSA-205ENST00000419493 USP21Q9UK80 565 aa13.78□□□□□ -0.2
CTSA-205ENST00000419493 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
CTSA-205ENST00000419493 USP32Q8NFA0 1604 aa13.77□□□□□ -0.21
CTSA-205ENST00000419493 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
CTSA-205ENST00000419493 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
CTSA-205ENST00000419493 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
CTSA-205ENST00000419493 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
CTSA-205ENST00000419493 TNS3Q68CZ2 1445 aa13.75□□□□□ -0.21
CTSA-205ENST00000419493 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
CTSA-205ENST00000419493 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
CTSA-205ENST00000419493 TRPM1Q7Z4N2 1603 aa13.74□□□□□ -0.21
CTSA-205ENST00000419493 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
CTSA-205ENST00000419493 ACEP12821 1306 aa13.73□□□□□ -0.21
CTSA-205ENST00000419493 EVC2Q86UK5 1308 aa13.73□□□□□ -0.21
CTSA-205ENST00000419493 RBM6P78332 1123 aaKnown RBP13.73□□□□□ -0.21
CTSA-205ENST00000419493 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
CTSA-205ENST00000419493 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
CTSA-205ENST00000419493 ATP7BP35670 1465 aa13.72□□□□□ -0.21
CTSA-205ENST00000419493 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
CTSA-205ENST00000419493 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
CTSA-205ENST00000419493 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
CTSA-205ENST00000419493 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
CTSA-205ENST00000419493 CABP1Q9NZU7 370 aa13.7□□□□□ -0.22
CTSA-205ENST00000419493 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
CTSA-205ENST00000419493 CCDC9Q9Y3X0 531 aaKnown RBP13.69□□□□□ -0.22
CTSA-205ENST00000419493 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
CTSA-205ENST00000419493 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
CTSA-205ENST00000419493 CCER1Q8TC90 406 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms