RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 EXOSC9Q06265 439 aaKnown RBP14.57□□□□□ -0.08
DDR1-232ENST00000418800 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.57□□□□□ -0.08
DDR1-232ENST00000418800 TNPO1Q92973 898 aaKnown RBP14.57□□□□□ -0.08
DDR1-232ENST00000418800 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
DDR1-232ENST00000418800 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
DDR1-232ENST00000418800 KIF3BO15066 747 aa14.57□□□□□ -0.08
DDR1-232ENST00000418800 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
DDR1-232ENST00000418800 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
DDR1-232ENST00000418800 MCTP1Q6DN14 999 aa14.56□□□□□ -0.08
DDR1-232ENST00000418800 TMEM132EQ6IEE7 984 aa14.56□□□□□ -0.08
DDR1-232ENST00000418800 ANTXR1Q9H6X2 564 aa14.55□□□□□ -0.08
DDR1-232ENST00000418800 ZSCAN30Q86W11 494 aa14.55□□□□□ -0.08
DDR1-232ENST00000418800 NKTRP30414 1462 aaKnown RBP14.54□□□□□ -0.08
DDR1-232ENST00000418800 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
DDR1-232ENST00000418800 TROQ12816 1431 aaPredicted RBP14.54□□□□□ -0.08
DDR1-232ENST00000418800 FSD2A1L4K1 749 aa14.54□□□□□ -0.08
DDR1-232ENST00000418800 RAPGEF6Q8TEU7 1601 aa14.53□□□□□ -0.08
DDR1-232ENST00000418800 NOB1Q9ULX3 412 aaKnown RBP14.52□□□□□ -0.08
DDR1-232ENST00000418800 FAM177BA6PVY3 158 aa14.52□□□□□ -0.09
DDR1-232ENST00000418800 SSFA2P28290 1259 aa14.52□□□□□ -0.09
DDR1-232ENST00000418800 IGSF3O75054 1194 aa14.52□□□□□ -0.09
DDR1-232ENST00000418800 MVPQ14764 893 aaKnown RBP14.52□□□□□ -0.09
DDR1-232ENST00000418800 CCDC173Q0VFZ6 552 aa14.51□□□□□ -0.09
DDR1-232ENST00000418800 SRPK2P78362 688 aaKnown RBP14.51□□□□□ -0.09
DDR1-232ENST00000418800 CBX1P83916 185 aa14.5□□□□□ -0.09
DDR1-232ENST00000418800 TSC1Q92574 1164 aa14.5□□□□□ -0.09
DDR1-232ENST00000418800 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
DDR1-232ENST00000418800 KDM5CP41229 1560 aa14.5□□□□□ -0.09
DDR1-232ENST00000418800 RAPGEF3O95398 923 aa14.5□□□□□ -0.09
DDR1-232ENST00000418800 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
DDR1-232ENST00000418800 GGNBP2Q9H3C7 697 aa14.49□□□□□ -0.09
DDR1-232ENST00000418800 EIF3AQ14152 1382 aaKnown RBP14.49□□□□□ -0.09
DDR1-232ENST00000418800 TMEM57Q8N5G2 664 aa14.49□□□□□ -0.09
DDR1-232ENST00000418800 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
DDR1-232ENST00000418800 SSH1Q8WYL5 1049 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 CARD14Q9BXL6 1004 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 PRAG1Q86YV5 1406 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 ATP10BO94823 1461 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 ABCA8O94911 1581 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 RIPK4P57078 832 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 DDX19BQ9UMR2 479 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 KIF14Q15058 1648 aa14.48□□□□□ -0.09
DDR1-232ENST00000418800 PRPF40AO75400 957 aaKnown RBP14.47□□□□□ -0.09
DDR1-232ENST00000418800 BLMP54132 1417 aaPredicted RBP14.46□□□□□ -0.09
DDR1-232ENST00000418800 TRIM27P14373 513 aa14.46□□□□□ -0.09
DDR1-232ENST00000418800 CDK11BP21127 795 aaKnown RBP14.46□□□□□ -0.09
DDR1-232ENST00000418800 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
DDR1-232ENST00000418800 THUMPD2Q9BTF0 503 aaKnown RBP14.45□□□□□ -0.1
DDR1-232ENST00000418800 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
DDR1-232ENST00000418800 ZMYM4Q5VZL5 1548 aa14.45□□□□□ -0.1
DDR1-232ENST00000418800 CHAMP1Q96JM3 812 aa14.45□□□□□ -0.1
DDR1-232ENST00000418800 ZNF521Q96K83 1311 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 SOX12O15370 315 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 OFD1O75665 1012 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 FBLN1P23142 703 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDR1-232ENST00000418800 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
DDR1-232ENST00000418800 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
DDR1-232ENST00000418800 HMOX1P09601 288 aa14.43□□□□□ -0.1
DDR1-232ENST00000418800 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
DDR1-232ENST00000418800 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
DDR1-232ENST00000418800 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
DDR1-232ENST00000418800 JARID2Q92833 1246 aaPredicted RBP14.43□□□□□ -0.1
DDR1-232ENST00000418800 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
DDR1-232ENST00000418800 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
DDR1-232ENST00000418800 PLEKHH2Q8IVE3 1493 aa14.41□□□□□ -0.1
DDR1-232ENST00000418800 ZNF830Q96NB3 372 aaPredicted RBP14.41□□□□□ -0.1
DDR1-232ENST00000418800 MAGI2Q86UL8 1455 aa14.41□□□□□ -0.1
DDR1-232ENST00000418800 SYCE3A1L190 88 aa14.41□□□□□ -0.1
DDR1-232ENST00000418800 KIAA2012Q0VF49 1180 aa14.41□□□□□ -0.1
DDR1-232ENST00000418800 CHD1LQ86WJ1 897 aa14.41□□□□□ -0.1
DDR1-232ENST00000418800 DNMT1P26358 1616 aaKnown RBP14.41□□□□□ -0.1
DDR1-232ENST00000418800 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.1
DDR1-232ENST00000418800 GAS2L2Q8NHY3 880 aa14.4□□□□□ -0.1
DDR1-232ENST00000418800 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
DDR1-232ENST00000418800 K7ELQ4 463 aaPredicted RBP14.4□□□□□ -0.1
DDR1-232ENST00000418800 CD2BP2O95400 341 aaKnown RBP14.4□□□□□ -0.1
DDR1-232ENST00000418800 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
DDR1-232ENST00000418800 ISY1Q9ULR0 285 aaKnown RBP14.39□□□□□ -0.11
DDR1-232ENST00000418800 AAMPQ13685 434 aa14.39□□□□□ -0.11
DDR1-232ENST00000418800 ADGRF5Q8IZF2 1346 aa14.39□□□□□ -0.11
DDR1-232ENST00000418800 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
DDR1-232ENST00000418800 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
DDR1-232ENST00000418800 ZNF771Q7L3S4 317 aaPredicted RBP14.38□□□□□ -0.11
DDR1-232ENST00000418800 TRMT2AQ8IZ69 625 aaKnown RBP14.38□□□□□ -0.11
DDR1-232ENST00000418800 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
DDR1-232ENST00000418800 SLC4A10Q6U841 1118 aa14.37□□□□□ -0.11
DDR1-232ENST00000418800 BAG4O95429 457 aaKnown RBP14.37□□□□□ -0.11
DDR1-232ENST00000418800 PDE4CQ08493 712 aa14.37□□□□□ -0.11
DDR1-232ENST00000418800 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
DDR1-232ENST00000418800 A2MP01023 1474 aa14.37□□□□□ -0.11
DDR1-232ENST00000418800 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
DDR1-232ENST00000418800 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
DDR1-232ENST00000418800 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
DDR1-232ENST00000418800 VGLL3A8MV65 326 aa14.36□□□□□ -0.11
DDR1-232ENST00000418800 PTMSP20962 102 aa14.36□□□□□ -0.11
DDR1-232ENST00000418800 CASC1Q6TDU7 716 aa14.36□□□□□ -0.11
DDR1-232ENST00000418800 C17orf53Q8N3J3 647 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms