RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SLIT1O75093 1534 aa10.4□□□□□ -0.74
LINC00396-201ENST00000411690 ERVK-7P63135 1459 aa10.4□□□□□ -0.74
LINC00396-201ENST00000411690 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
LINC00396-201ENST00000411690 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
LINC00396-201ENST00000411690 FGD6Q6ZV73 1430 aa10.4□□□□□ -0.75
LINC00396-201ENST00000411690 FAM205CA6NFA0 338 aa10.39□□□□□ -0.75
LINC00396-201ENST00000411690 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
LINC00396-201ENST00000411690 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
LINC00396-201ENST00000411690 NUTM2DQ5VT03 806 aaPredicted RBP10.39□□□□□ -0.75
LINC00396-201ENST00000411690 NUTM2AQ8IVF1 878 aaPredicted RBP10.39□□□□□ -0.75
LINC00396-201ENST00000411690 COL16A1Q07092 1604 aaPredicted RBP10.38□□□□□ -0.75
LINC00396-201ENST00000411690 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
LINC00396-201ENST00000411690 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
LINC00396-201ENST00000411690 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
LINC00396-201ENST00000411690 SLC26A8Q96RN1 970 aa10.37□□□□□ -0.75
LINC00396-201ENST00000411690 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
LINC00396-201ENST00000411690 AFF2P51816 1311 aa10.36□□□□□ -0.75
LINC00396-201ENST00000411690 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
LINC00396-201ENST00000411690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC00396-201ENST00000411690 ABCC3O15438 1527 aa10.36□□□□□ -0.75
LINC00396-201ENST00000411690 TMEM2Q9UHN6 1383 aa10.36□□□□□ -0.75
LINC00396-201ENST00000411690 RGS12O14924 1447 aa10.35□□□□□ -0.75
LINC00396-201ENST00000411690 RBM6P78332 1123 aaKnown RBP10.35□□□□□ -0.75
LINC00396-201ENST00000411690 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
LINC00396-201ENST00000411690 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
LINC00396-201ENST00000411690 QTRT2Q9H974 415 aaKnown RBP10.35□□□□□ -0.75
LINC00396-201ENST00000411690 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
LINC00396-201ENST00000411690 CCDC141Q6ZP82 1450 aa10.35□□□□□ -0.75
LINC00396-201ENST00000411690 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
LINC00396-201ENST00000411690 TSPY4P0CV99 314 aa10.34□□□□□ -0.75
LINC00396-201ENST00000411690 TSPY10P0CW01 314 aa10.34□□□□□ -0.75
LINC00396-201ENST00000411690 NKTRP30414 1462 aaKnown RBP10.34□□□□□ -0.75
LINC00396-201ENST00000411690 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
LINC00396-201ENST00000411690 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
LINC00396-201ENST00000411690 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
LINC00396-201ENST00000411690 SHPRHQ149N8 1683 aa10.33□□□□□ -0.76
LINC00396-201ENST00000411690 SRCAPQ6ZRS2 3230 aa10.33□□□□□ -0.76
LINC00396-201ENST00000411690 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
LINC00396-201ENST00000411690 PSEN1P49768 467 aa10.32□□□□□ -0.76
LINC00396-201ENST00000411690 BCANQ96GW7 911 aa10.32□□□□□ -0.76
LINC00396-201ENST00000411690 C14orf37Q86TY3 774 aa10.31□□□□□ -0.76
LINC00396-201ENST00000411690 NGLY1Q96IV0 654 aa10.31□□□□□ -0.76
LINC00396-201ENST00000411690 TET3O43151 1660 aa10.31□□□□□ -0.76
LINC00396-201ENST00000411690 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
LINC00396-201ENST00000411690 AHDC1Q5TGY3 1603 aaPredicted RBP10.3□□□□□ -0.76
LINC00396-201ENST00000411690 C8orf37Q96NL8 207 aa10.3□□□□□ -0.76
LINC00396-201ENST00000411690 PIK3C2BO00750 1634 aa10.29□□□□□ -0.76
LINC00396-201ENST00000411690 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
LINC00396-201ENST00000411690 GSE1Q14687 1217 aa10.29□□□□□ -0.76
LINC00396-201ENST00000411690 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
LINC00396-201ENST00000411690 CAMSAP2Q08AD1 1489 aa10.29□□□□□ -0.76
LINC00396-201ENST00000411690 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
LINC00396-201ENST00000411690 CEP152O94986 1710 aa10.28□□□□□ -0.76
LINC00396-201ENST00000411690 ATF3P18847 181 aa10.28□□□□□ -0.76
LINC00396-201ENST00000411690 CCDC125Q86Z20 511 aa10.28□□□□□ -0.76
LINC00396-201ENST00000411690 EFCAB6Q5THR3 1501 aa10.28□□□□□ -0.76
LINC00396-201ENST00000411690 NCOA3Q9Y6Q9 1424 aa10.27□□□□□ -0.77
LINC00396-201ENST00000411690 IDI1Q13907 227 aa10.27□□□□□ -0.77
LINC00396-201ENST00000411690 C19orf44Q9H6X5 657 aa10.27□□□□□ -0.77
LINC00396-201ENST00000411690 ARHGAP31Q2M1Z3 1444 aa10.26□□□□□ -0.77
LINC00396-201ENST00000411690 CHRM1P11229 460 aaPredicted RBP10.26□□□□□ -0.77
LINC00396-201ENST00000411690 BRINP3Q76B58 766 aa10.26□□□□□ -0.77
LINC00396-201ENST00000411690 DIP2AQ14689 1571 aa10.26□□□□□ -0.77
LINC00396-201ENST00000411690 MROH1Q8NDA8 1641 aa10.25□□□□□ -0.77
LINC00396-201ENST00000411690 EIF2AK4Q9P2K8 1649 aaKnown RBP10.25□□□□□ -0.77
LINC00396-201ENST00000411690 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
LINC00396-201ENST00000411690 LRRC59Q96AG4 307 aaKnown RBP10.25□□□□□ -0.77
LINC00396-201ENST00000411690 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
LINC00396-201ENST00000411690 CEP162Q5TB80 1403 aa10.24□□□□□ -0.77
LINC00396-201ENST00000411690 EHBP1L1Q8N3D4 1523 aa10.24□□□□□ -0.77
LINC00396-201ENST00000411690 ARHGEF5Q12774 1597 aa10.24□□□□□ -0.77
LINC00396-201ENST00000411690 VASPP50552 380 aaPredicted RBP10.24□□□□□ -0.77
LINC00396-201ENST00000411690 SETD5Q9C0A6 1442 aa10.24□□□□□ -0.77
LINC00396-201ENST00000411690 CHD2O14647 1828 aaKnown RBP10.23□□□□□ -0.77
LINC00396-201ENST00000411690 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.22□□□□□ -0.77
LINC00396-201ENST00000411690 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
LINC00396-201ENST00000411690 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
LINC00396-201ENST00000411690 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
LINC00396-201ENST00000411690 USP21Q9UK80 565 aa10.22□□□□□ -0.77
LINC00396-201ENST00000411690 TRPC5Q9UL62 973 aaPredicted RBP10.22□□□□□ -0.77
LINC00396-201ENST00000411690 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
LINC00396-201ENST00000411690 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.77
LINC00396-201ENST00000411690 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
LINC00396-201ENST00000411690 TBX22Q9Y458 520 aa10.21□□□□□ -0.77
LINC00396-201ENST00000411690 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
LINC00396-201ENST00000411690 HOXB1P14653 301 aaPredicted RBP10.2□□□□□ -0.78
LINC00396-201ENST00000411690 PLEKHG1Q9ULL1 1385 aa10.2□□□□□ -0.78
LINC00396-201ENST00000411690 PNPLA6Q8IY17 1366 aa10.19□□□□□ -0.78
LINC00396-201ENST00000411690 LRP5O75197 1615 aa10.18□□□□□ -0.78
LINC00396-201ENST00000411690 ASXL1Q8IXJ9 1541 aa10.18□□□□□ -0.78
LINC00396-201ENST00000411690 DUOX2Q9NRD8 1548 aa10.18□□□□□ -0.78
LINC00396-201ENST00000411690 KANK1Q14678 1352 aa10.18□□□□□ -0.78
LINC00396-201ENST00000411690 SLC52A1Q9NWF4 448 aa10.18□□□□□ -0.78
LINC00396-201ENST00000411690 ADGRB3O60242 1522 aa10.17□□□□□ -0.78
LINC00396-201ENST00000411690 DDX17Q92841 729 aaKnown RBP10.17□□□□□ -0.78
LINC00396-201ENST00000411690 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
LINC00396-201ENST00000411690 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
LINC00396-201ENST00000411690 BLMP54132 1417 aaPredicted RBP10.16□□□□□ -0.78
LINC00396-201ENST00000411690 RIMS2Q9UQ26 1411 aa10.16□□□□□ -0.78
LINC00396-201ENST00000411690 NHSL1Q5SYE7 1610 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms