RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 KIF3BO15066 747 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 HMGB1P09429 215 aaKnown RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 FAM69CQ0P6D2 419 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 RALYLQ86SE5 291 aaKnown RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 MAGEC2Q9UBF1 373 aaPredicted RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 TXLNAP40222 546 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 TEX35Q5T0J7 233 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 RAPGEF4Q8WZA2 1011 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 RNF20Q5VTR2 975 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 OLFM4Q6UX06 510 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 DCAF1Q9Y4B6 1507 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 TBC1D2BQ9UPU7 963 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 RGS22Q8NE09 1264 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 RILPL2Q969X0 211 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 CENPQQ7L2Z9 268 aaPredicted RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 DIAPH3Q9NSV4 1193 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 SOGA3Q5TF21 947 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 BBXQ8WY36 941 aaPredicted RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 GZF1Q9H116 711 aaPredicted RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 IFIT2P09913 472 aaKnown RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 ZKSCAN1P17029 563 aaPredicted RBP4.07□□□□□ -1.76
NEB-204ENST00000409198 CHMP4BP1P59074 171 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 VTI1AQ96AJ9 217 aa4.07□□□□□ -1.76
NEB-204ENST00000409198 NOM1Q5C9Z4 860 aaKnown RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 EIF3AQ14152 1382 aaKnown RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 CETN2P41208 172 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 TXLNBQ8N3L3 684 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 RALBP1Q15311 655 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 MTMR7Q9Y216 660 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 GRM1Q13255 1194 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 WDR78Q5VTH9 848 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 CCDC150Q8NCX0 1101 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 MRPS9P82933 396 aaKnown RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 GIGYF2Q6Y7W6 1299 aaKnown RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 CCDC117Q8IWD4 279 aaPredicted RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 CCNB3Q8WWL7 1395 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 CCDC91Q7Z6B0 441 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 DCAF11Q8TEB1 546 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 LUC7LQ9NQ29 371 aaKnown RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 LPXNO60711 386 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 ZNF76P36508 570 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 PDILTQ8N807 584 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 COG3Q96JB2 828 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 NUTM2FA1L443 756 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 PLIN1O60240 522 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 WASHC4Q2M389 1173 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 CCDC181Q5TID7 509 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 PIP4K2AP48426 406 aaPredicted RBP4.06□□□□□ -1.76
NEB-204ENST00000409198 UBE2Q2Q8WVN8 375 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 SSFA2P28290 1259 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 RIC3Q7Z5B4 369 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 PIBF1Q8WXW3 757 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 RABEP1Q15276 862 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 DEF6Q9H4E7 631 aa4.06□□□□□ -1.76
NEB-204ENST00000409198 BMP2KQ9NSY1 1161 aaPredicted RBP4.05□□□□□ -1.76
NEB-204ENST00000409198 ANKRD18BA2A2Z9 1011 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 TRIM22Q8IYM9 498 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 RSPH6AQ9H0K4 717 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 RBM10P98175 930 aaKnown RBP4.05□□□□□ -1.76
NEB-204ENST00000409198 AIDAQ96BJ3 306 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 ZWINTO95229 277 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 ZHX3Q9H4I2 956 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 ENOX2Q16206 610 aaKnown RBP4.05□□□□□ -1.76
NEB-204ENST00000409198 NOL8Q76FK4 1167 aaKnown RBP4.05□□□□□ -1.76
NEB-204ENST00000409198 RBM42Q9BTD8 480 aaKnown RBP4.05□□□□□ -1.76
NEB-204ENST00000409198 EIF2S2P20042 333 aaKnown RBP4.05□□□□□ -1.76
NEB-204ENST00000409198 SMARCE1Q969G3 411 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 CCDC175P0C221 793 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 BRPF3Q9ULD4 1205 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 FERP16591 822 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 NF2P35240 595 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 WASHC2CQ9Y4E1 1318 aa4.05□□□□□ -1.76
NEB-204ENST00000409198 BIN2Q9UBW5 565 aaPredicted RBP4.04□□□□□ -1.76
NEB-204ENST00000409198 HMGB1P1B2RPK0 211 aaPredicted RBP4.04□□□□□ -1.76
NEB-204ENST00000409198 EFCAB2Q5VUJ9 269 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 CFAP57Q96MR6 1250 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 CCDC146Q8IYE0 955 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 FERMT1Q9BQL6 677 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 FILIP1LQ4L180 1135 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 PSMD1Q99460 953 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 EIF3JO75822 258 aaKnown RBP4.04□□□□□ -1.76
NEB-204ENST00000409198 SSR1P43307 286 aaKnown RBP4.04□□□□□ -1.76
NEB-204ENST00000409198 CLASRPQ8N2M8 674 aaKnown RBP4.04□□□□□ -1.76
NEB-204ENST00000409198 ARGLU1Q9NWB6 273 aaPredicted RBP4.04□□□□□ -1.76
NEB-204ENST00000409198 NBPF8Q3BBV2 869 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 NBPF14Q5TI25 921 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 GOLGA6L7A0A1B0GV03 622 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 EHMT1Q9H9B1 1298 aa4.04□□□□□ -1.76
NEB-204ENST00000409198 TAF12Q16514 161 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 SPATA24Q86W54 205 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 CCDC82Q8N4S0 544 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 NEUROD6Q96NK8 337 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 INCENPQ9NQS7 918 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 CEP164Q9UPV0 1460 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 JAKMIP3Q5VZ66 844 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 KIF4AO95239 1232 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 VIMP08670 466 aaKnown RBP4.03□□□□□ -1.76
NEB-204ENST00000409198 GTPBP4Q9BZE4 634 aaKnown RBP4.03□□□□□ -1.76
NEB-204ENST00000409198 FAM177BA6PVY3 158 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 BCCIPQ9P287 314 aaKnown RBP eCLIP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms