RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
USP16-202ENST00000399973 PLEKHH1Q9ULM0 1364 aa12.25□□□□□ -0.45
USP16-202ENST00000399973 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
USP16-202ENST00000399973 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
USP16-202ENST00000399973 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
USP16-202ENST00000399973 KIF1AQ12756 1690 aa12.23□□□□□ -0.45
USP16-202ENST00000399973 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
USP16-202ENST00000399973 ABCC11Q96J66 1382 aa12.23□□□□□ -0.45
USP16-202ENST00000399973 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
USP16-202ENST00000399973 C14orf93Q9H972 538 aaKnown RBP12.23□□□□□ -0.45
USP16-202ENST00000399973 JCADQ9P266 1359 aa12.22□□□□□ -0.45
USP16-202ENST00000399973 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
USP16-202ENST00000399973 ADGRB2O60241 1585 aa12.22□□□□□ -0.45
USP16-202ENST00000399973 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP16-202ENST00000399973 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
USP16-202ENST00000399973 LRP6O75581 1613 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 TRPM1Q7Z4N2 1603 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 ILDR2Q71H61 639 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 DDX17Q92841 729 aaKnown RBP12.19□□□□□ -0.46
USP16-202ENST00000399973 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 POGKQ9P215 609 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
USP16-202ENST00000399973 ORAI2Q96SN7 254 aa12.18□□□□□ -0.46
USP16-202ENST00000399973 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
USP16-202ENST00000399973 QRICH2Q9H0J4 1663 aa12.18□□□□□ -0.46
USP16-202ENST00000399973 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
USP16-202ENST00000399973 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
USP16-202ENST00000399973 SIN3AQ96ST3 1273 aa12.17□□□□□ -0.46
USP16-202ENST00000399973 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
USP16-202ENST00000399973 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
USP16-202ENST00000399973 COL22A1Q8NFW1 1626 aaPredicted RBP12.15□□□□□ -0.47
USP16-202ENST00000399973 PXDNQ92626 1479 aa12.14□□□□□ -0.47
USP16-202ENST00000399973 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
USP16-202ENST00000399973 SPATA31A6Q5VVP1 1343 aa12.14□□□□□ -0.47
USP16-202ENST00000399973 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
USP16-202ENST00000399973 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
USP16-202ENST00000399973 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
USP16-202ENST00000399973 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
USP16-202ENST00000399973 HIRIP3Q9BW71 556 aaPredicted RBP12.14□□□□□ -0.47
USP16-202ENST00000399973 TULP4Q9NRJ4 1543 aa12.14□□□□□ -0.47
USP16-202ENST00000399973 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
USP16-202ENST00000399973 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
USP16-202ENST00000399973 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
USP16-202ENST00000399973 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
USP16-202ENST00000399973 TOPAZ1Q8N9V7 1692 aa12.13□□□□□ -0.47
USP16-202ENST00000399973 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
USP16-202ENST00000399973 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
USP16-202ENST00000399973 ABCA3Q99758 1704 aa12.12□□□□□ -0.47
USP16-202ENST00000399973 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
USP16-202ENST00000399973 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
USP16-202ENST00000399973 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
USP16-202ENST00000399973 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
USP16-202ENST00000399973 FOXO3O43524 673 aa12.1□□□□□ -0.47
USP16-202ENST00000399973 TRPM3Q9HCF6 1732 aaPredicted RBP12.09□□□□□ -0.47
USP16-202ENST00000399973 NBPF1Q3BBV0 1214 aa12.09□□□□□ -0.47
USP16-202ENST00000399973 ATP7BP35670 1465 aa12.08□□□□□ -0.47
USP16-202ENST00000399973 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
USP16-202ENST00000399973 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
USP16-202ENST00000399973 RGS17Q9UGC6 210 aaPredicted RBP12.07□□□□□ -0.48
USP16-202ENST00000399973 ALS2Q96Q42 1657 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 TNS3Q68CZ2 1445 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 WASLO00401 505 aaPredicted RBP12.06□□□□□ -0.48
USP16-202ENST00000399973 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 C8orf37Q96NL8 207 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 PLCH1Q4KWH8 1693 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 PRR36Q9H6K5 1346 aa12.06□□□□□ -0.48
USP16-202ENST00000399973 CENPJQ9HC77 1338 aaPredicted RBP12.06□□□□□ -0.48
USP16-202ENST00000399973 SOCS7O14512 581 aa12.05□□□□□ -0.48
USP16-202ENST00000399973 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
USP16-202ENST00000399973 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
USP16-202ENST00000399973 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
USP16-202ENST00000399973 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
USP16-202ENST00000399973 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
USP16-202ENST00000399973 PCGF6Q9BYE7 350 aa12.04□□□□□ -0.48
USP16-202ENST00000399973 AFF2P51816 1311 aa12.04□□□□□ -0.48
USP16-202ENST00000399973 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
USP16-202ENST00000399973 PSME1Q06323 249 aa12.03□□□□□ -0.48
USP16-202ENST00000399973 SPATA31A3Q5VYP0 1347 aa12.03□□□□□ -0.48
USP16-202ENST00000399973 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
USP16-202ENST00000399973 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
USP16-202ENST00000399973 NBPF8Q3BBV2 869 aa12.02□□□□□ -0.49
USP16-202ENST00000399973 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
USP16-202ENST00000399973 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
USP16-202ENST00000399973 CDK19Q9BWU1 502 aa12.02□□□□□ -0.49
USP16-202ENST00000399973 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.02□□□□□ -0.49
USP16-202ENST00000399973 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
USP16-202ENST00000399973 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
USP16-202ENST00000399973 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
USP16-202ENST00000399973 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
USP16-202ENST00000399973 ARHGEF10O15013 1369 aa12.01□□□□□ -0.49
USP16-202ENST00000399973 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
USP16-202ENST00000399973 AKAP12Q02952 1782 aa12□□□□□ -0.49
USP16-202ENST00000399973 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
USP16-202ENST00000399973 CARD11Q9BXL7 1154 aa11.99□□□□□ -0.49
USP16-202ENST00000399973 NWD2Q9ULI1 1742 aa11.99□□□□□ -0.49
USP16-202ENST00000399973 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
USP16-202ENST00000399973 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms