RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SPATA31A6Q5VVP1 1343 aa21.76■■□□□ 1.07
SMIM11A-203ENST00000399299 ADGRB1O14514 1584 aa21.74■■□□□ 1.07
SMIM11A-203ENST00000399299 DLC1Q96QB1 1528 aa21.74■■□□□ 1.07
SMIM11A-203ENST00000399299 WAPLQ7Z5K2 1190 aa21.73■■□□□ 1.07
SMIM11A-203ENST00000399299 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
SMIM11A-203ENST00000399299 DCAF11Q8TEB1 546 aa21.72■■□□□ 1.07
SMIM11A-203ENST00000399299 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
SMIM11A-203ENST00000399299 RGS17Q9UGC6 210 aaPredicted RBP21.71■■□□□ 1.07
SMIM11A-203ENST00000399299 LRP6O75581 1613 aa21.7■■□□□ 1.06
SMIM11A-203ENST00000399299 LRRC59Q96AG4 307 aaKnown RBP21.7■■□□□ 1.06
SMIM11A-203ENST00000399299 ORAI2Q96SN7 254 aa21.69■■□□□ 1.06
SMIM11A-203ENST00000399299 KDM2AQ9Y2K7 1162 aa21.68■■□□□ 1.06
SMIM11A-203ENST00000399299 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
SMIM11A-203ENST00000399299 DDX17Q92841 729 aaKnown RBP21.66■■□□□ 1.06
SMIM11A-203ENST00000399299 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
SMIM11A-203ENST00000399299 KIAA1210Q9ULL0 1709 aa21.65■■□□□ 1.06
SMIM11A-203ENST00000399299 ADGRB2O60241 1585 aa21.65■■□□□ 1.06
SMIM11A-203ENST00000399299 KIF1AQ12756 1690 aa21.64■■□□□ 1.05
SMIM11A-203ENST00000399299 NPHP3Q7Z494 1330 aa21.63■■□□□ 1.05
SMIM11A-203ENST00000399299 ESCO1Q5FWF5 840 aa21.63■■□□□ 1.05
SMIM11A-203ENST00000399299 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
SMIM11A-203ENST00000399299 PXDNQ92626 1479 aa21.61■■□□□ 1.05
SMIM11A-203ENST00000399299 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
SMIM11A-203ENST00000399299 COL22A1Q8NFW1 1626 aaPredicted RBP21.6■■□□□ 1.05
SMIM11A-203ENST00000399299 POGKQ9P215 609 aa21.6■■□□□ 1.05
SMIM11A-203ENST00000399299 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
SMIM11A-203ENST00000399299 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
SMIM11A-203ENST00000399299 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
SMIM11A-203ENST00000399299 TRAK1Q9UPV9 953 aa21.59■■□□□ 1.05
SMIM11A-203ENST00000399299 NUTM2FA1L443 756 aa21.57■■□□□ 1.04
SMIM11A-203ENST00000399299 ANKARQ7Z5J8 1434 aa21.56■■□□□ 1.04
SMIM11A-203ENST00000399299 NUTM2BA6NNL0 878 aaPredicted RBP21.56■■□□□ 1.04
SMIM11A-203ENST00000399299 NUTM2EB1AL46 878 aaPredicted RBP21.56■■□□□ 1.04
SMIM11A-203ENST00000399299 SAFB2Q14151 953 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMIM11A-203ENST00000399299 NUTM2AQ8IVF1 878 aaPredicted RBP21.56■■□□□ 1.04
SMIM11A-203ENST00000399299 USP32Q8NFA0 1604 aa21.55■■□□□ 1.04
SMIM11A-203ENST00000399299 FOXO3O43524 673 aa21.55■■□□□ 1.04
SMIM11A-203ENST00000399299 ZNF772Q68DY9 489 aaPredicted RBP21.54■■□□□ 1.04
SMIM11A-203ENST00000399299 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
SMIM11A-203ENST00000399299 TULP4Q9NRJ4 1543 aa21.51■■□□□ 1.03
SMIM11A-203ENST00000399299 PHF8Q9UPP1 1060 aa21.51■■□□□ 1.03
SMIM11A-203ENST00000399299 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
SMIM11A-203ENST00000399299 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
SMIM11A-203ENST00000399299 XPCQ01831 940 aaPredicted RBP21.48■■□□□ 1.03
SMIM11A-203ENST00000399299 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
SMIM11A-203ENST00000399299 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
SMIM11A-203ENST00000399299 HIRIP3Q9BW71 556 aaPredicted RBP21.48■■□□□ 1.03
SMIM11A-203ENST00000399299 MARF1Q9Y4F3 1742 aaKnown RBP21.48■■□□□ 1.03
SMIM11A-203ENST00000399299 AFF2P51816 1311 aa21.48■■□□□ 1.03
SMIM11A-203ENST00000399299 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
SMIM11A-203ENST00000399299 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
SMIM11A-203ENST00000399299 SPATA31A3Q5VYP0 1347 aa21.47■■□□□ 1.03
SMIM11A-203ENST00000399299 TRPM1Q7Z4N2 1603 aa21.46■■□□□ 1.03
SMIM11A-203ENST00000399299 NBPF1Q3BBV0 1214 aa21.45■■□□□ 1.02
SMIM11A-203ENST00000399299 KRT28Q7Z3Y7 464 aa21.45■■□□□ 1.02
SMIM11A-203ENST00000399299 C8orf37Q96NL8 207 aa21.45■■□□□ 1.02
SMIM11A-203ENST00000399299 TNS3Q68CZ2 1445 aa21.45■■□□□ 1.02
SMIM11A-203ENST00000399299 ADAMTS2O95450 1211 aa21.44■■□□□ 1.02
SMIM11A-203ENST00000399299 PSME1Q06323 249 aa21.44■■□□□ 1.02
SMIM11A-203ENST00000399299 PRR36Q9H6K5 1346 aa21.44■■□□□ 1.02
SMIM11A-203ENST00000399299 SBNO1A3KN83 1393 aa21.44■■□□□ 1.02
SMIM11A-203ENST00000399299 ATP7BP35670 1465 aa21.43■■□□□ 1.02
SMIM11A-203ENST00000399299 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
SMIM11A-203ENST00000399299 TRPM3Q9HCF6 1732 aaPredicted RBP21.42■■□□□ 1.02
SMIM11A-203ENST00000399299 CDK12Q9NYV4 1490 aaPredicted RBP21.42■■□□□ 1.02
SMIM11A-203ENST00000399299 NGLY1Q96IV0 654 aa21.41■■□□□ 1.02
SMIM11A-203ENST00000399299 PMFBP1Q8TBY8 1022 aa21.4■■□□□ 1.02
SMIM11A-203ENST00000399299 TOPAZ1Q8N9V7 1692 aa21.4■■□□□ 1.02
SMIM11A-203ENST00000399299 ARHGEF10O15013 1369 aa21.39■■□□□ 1.02
SMIM11A-203ENST00000399299 RXRBP28702 533 aa21.39■■□□□ 1.01
SMIM11A-203ENST00000399299 ABCA3Q99758 1704 aa21.38■■□□□ 1.01
SMIM11A-203ENST00000399299 ALS2Q96Q42 1657 aa21.38■■□□□ 1.01
SMIM11A-203ENST00000399299 QRICH2Q9H0J4 1663 aa21.38■■□□□ 1.01
SMIM11A-203ENST00000399299 FNBP4Q8N3X1 1017 aaPredicted RBP21.38■■□□□ 1.01
SMIM11A-203ENST00000399299 GPRASP1Q5JY77 1395 aa21.37■■□□□ 1.01
SMIM11A-203ENST00000399299 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
SMIM11A-203ENST00000399299 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
SMIM11A-203ENST00000399299 QTRT2Q9H974 415 aaKnown RBP21.36■■□□□ 1.01
SMIM11A-203ENST00000399299 CDK19Q9BWU1 502 aa21.35■■□□□ 1.01
SMIM11A-203ENST00000399299 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.35■■□□□ 1.01
SMIM11A-203ENST00000399299 RBM6P78332 1123 aaKnown RBP21.34■■□□□ 1.01
SMIM11A-203ENST00000399299 USP21Q9UK80 565 aa21.34■■□□□ 1.01
SMIM11A-203ENST00000399299 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1
SMIM11A-203ENST00000399299 ATRNO75882 1429 aa21.32■■□□□ 1
SMIM11A-203ENST00000399299 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
SMIM11A-203ENST00000399299 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
SMIM11A-203ENST00000399299 SLIT2O94813 1529 aa21.31■■□□□ 1
SMIM11A-203ENST00000399299 TRPC5Q9UL62 973 aaPredicted RBP21.31■■□□□ 1
SMIM11A-203ENST00000399299 CCDC61Q9Y6R9 512 aa21.31■■□□□ 1
SMIM11A-203ENST00000399299 POLR3AO14802 1390 aaPredicted RBP21.31■■□□□ 1
SMIM11A-203ENST00000399299 TONSLQ96HA7 1378 aa21.3■■□□□ 1
SMIM11A-203ENST00000399299 RGS12O14924 1447 aa21.29■■□□□ 1
SMIM11A-203ENST00000399299 CRYBG1Q9Y4K1 1723 aa21.29■■□□□ 1
SMIM11A-203ENST00000399299 LMOD2Q6P5Q4 547 aa21.29■■□□□ 1
SMIM11A-203ENST00000399299 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
SMIM11A-203ENST00000399299 PLEKHG3A1L390 1219 aa21.28■■□□□ 1
SMIM11A-203ENST00000399299 HAP1P54257 671 aaPredicted RBP21.28■■□□□ 1
SMIM11A-203ENST00000399299 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
SMIM11A-203ENST00000399299 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
SMIM11A-203ENST00000399299 CABLES1Q8TDN4 633 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms