RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 STRCP1A6NGW2 1772 aa19.7■□□□□ 0.74
GAPDH-203ENST00000396858 ADGRB2O60241 1585 aa19.7■□□□□ 0.74
GAPDH-203ENST00000396858 WAPLQ7Z5K2 1190 aa19.69■□□□□ 0.74
GAPDH-203ENST00000396858 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
GAPDH-203ENST00000396858 MINK1Q8N4C8 1332 aaPredicted RBP19.68■□□□□ 0.74
GAPDH-203ENST00000396858 TMF1P82094 1093 aa19.67■□□□□ 0.74
GAPDH-203ENST00000396858 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
GAPDH-203ENST00000396858 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
GAPDH-203ENST00000396858 MYOM1P52179 1685 aa19.66■□□□□ 0.74
GAPDH-203ENST00000396858 SIRT1Q96EB6 747 aa19.64■□□□□ 0.73
GAPDH-203ENST00000396858 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
GAPDH-203ENST00000396858 EVC2Q86UK5 1308 aa19.6■□□□□ 0.73
GAPDH-203ENST00000396858 ZNF335Q9H4Z2 1342 aaPredicted RBP19.6■□□□□ 0.73
GAPDH-203ENST00000396858 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
GAPDH-203ENST00000396858 RBM33Q96EV2 1170 aaKnown RBP19.58■□□□□ 0.72
GAPDH-203ENST00000396858 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
GAPDH-203ENST00000396858 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
GAPDH-203ENST00000396858 ATP7BP35670 1465 aa19.56■□□□□ 0.72
GAPDH-203ENST00000396858 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
GAPDH-203ENST00000396858 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
GAPDH-203ENST00000396858 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
GAPDH-203ENST00000396858 TOPAZ1Q8N9V7 1692 aa19.56■□□□□ 0.72
GAPDH-203ENST00000396858 SLC24A1O60721 1099 aa19.55■□□□□ 0.72
GAPDH-203ENST00000396858 SRPK2P78362 688 aaKnown RBP19.55■□□□□ 0.72
GAPDH-203ENST00000396858 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
GAPDH-203ENST00000396858 USP32Q8NFA0 1604 aa19.54■□□□□ 0.72
GAPDH-203ENST00000396858 LRRC7Q96NW7 1537 aa19.54■□□□□ 0.72
GAPDH-203ENST00000396858 ATAD2Q6PL18 1390 aa19.54■□□□□ 0.72
GAPDH-203ENST00000396858 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
GAPDH-203ENST00000396858 PROSER2Q86WR7 435 aaPredicted RBP19.53■□□□□ 0.72
GAPDH-203ENST00000396858 CDK19Q9BWU1 502 aa19.53■□□□□ 0.72
GAPDH-203ENST00000396858 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
GAPDH-203ENST00000396858 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
GAPDH-203ENST00000396858 PRR36Q9H6K5 1346 aa19.5■□□□□ 0.71
GAPDH-203ENST00000396858 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
GAPDH-203ENST00000396858 ITSN1Q15811 1721 aa19.48■□□□□ 0.71
GAPDH-203ENST00000396858 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
GAPDH-203ENST00000396858 ANKARQ7Z5J8 1434 aa19.48■□□□□ 0.71
GAPDH-203ENST00000396858 NUTM2FA1L443 756 aa19.47■□□□□ 0.71
GAPDH-203ENST00000396858 PUS7Q96PZ0 661 aaKnown RBP19.47■□□□□ 0.71
GAPDH-203ENST00000396858 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
GAPDH-203ENST00000396858 NCOA3Q9Y6Q9 1424 aa19.47■□□□□ 0.71
GAPDH-203ENST00000396858 NINLQ9Y2I6 1382 aa19.46■□□□□ 0.71
GAPDH-203ENST00000396858 DCCP43146 1447 aa19.46■□□□□ 0.71
GAPDH-203ENST00000396858 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
GAPDH-203ENST00000396858 CD163L1Q9NR16 1453 aa19.45■□□□□ 0.7
GAPDH-203ENST00000396858 NUDT16Q96DE0 195 aaKnown RBP19.44■□□□□ 0.7
GAPDH-203ENST00000396858 RGPD8O14715 1765 aaPredicted RBP19.43■□□□□ 0.7
GAPDH-203ENST00000396858 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
GAPDH-203ENST00000396858 A0A1W2PP64 1363 aa19.43■□□□□ 0.7
GAPDH-203ENST00000396858 MSH6P52701 1360 aa19.43■□□□□ 0.7
GAPDH-203ENST00000396858 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
GAPDH-203ENST00000396858 PANK3Q9H999 370 aa19.42■□□□□ 0.7
GAPDH-203ENST00000396858 MST1RQ04912 1400 aa19.41■□□□□ 0.7
GAPDH-203ENST00000396858 NSD3Q9BZ95 1437 aa19.41■□□□□ 0.7
GAPDH-203ENST00000396858 AKAP12Q02952 1782 aa19.4■□□□□ 0.7
GAPDH-203ENST00000396858 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.7
GAPDH-203ENST00000396858 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
GAPDH-203ENST00000396858 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
GAPDH-203ENST00000396858 NRKQ7Z2Y5 1582 aa19.39■□□□□ 0.69
GAPDH-203ENST00000396858 C1orf167Q5SNV9 1468 aa19.38■□□□□ 0.69
GAPDH-203ENST00000396858 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
GAPDH-203ENST00000396858 KIF1AQ12756 1690 aa19.36■□□□□ 0.69
GAPDH-203ENST00000396858 CPSF1Q10570 1443 aaKnown RBP19.36■□□□□ 0.69
GAPDH-203ENST00000396858 ATF3P18847 181 aa19.35■□□□□ 0.69
GAPDH-203ENST00000396858 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
GAPDH-203ENST00000396858 HDGFL2Q7Z4V5 671 aaPredicted RBP19.34■□□□□ 0.69
GAPDH-203ENST00000396858 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
GAPDH-203ENST00000396858 TERF2IPQ9NYB0 399 aa19.34■□□□□ 0.69
GAPDH-203ENST00000396858 PMFBP1Q8TBY8 1022 aa19.33■□□□□ 0.68
GAPDH-203ENST00000396858 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
GAPDH-203ENST00000396858 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
GAPDH-203ENST00000396858 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
GAPDH-203ENST00000396858 PER1O15534 1290 aaPredicted RBP19.32■□□□□ 0.68
GAPDH-203ENST00000396858 CADPS2Q86UW7 1296 aa19.32■□□□□ 0.68
GAPDH-203ENST00000396858 USP6P35125 1406 aa19.32■□□□□ 0.68
GAPDH-203ENST00000396858 EDC4Q6P2E9 1401 aaKnown RBP19.32■□□□□ 0.68
GAPDH-203ENST00000396858 ACEP12821 1306 aa19.31■□□□□ 0.68
GAPDH-203ENST00000396858 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
GAPDH-203ENST00000396858 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
GAPDH-203ENST00000396858 ESCO1Q5FWF5 840 aa19.3■□□□□ 0.68
GAPDH-203ENST00000396858 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
GAPDH-203ENST00000396858 ANP32CO43423 234 aa19.29■□□□□ 0.68
GAPDH-203ENST00000396858 ORAI2Q96SN7 254 aa19.29■□□□□ 0.68
GAPDH-203ENST00000396858 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
GAPDH-203ENST00000396858 NGDNQ8NEJ9 315 aaKnown RBP19.28■□□□□ 0.68
GAPDH-203ENST00000396858 ANKRD26Q9UPS8 1709 aa19.28■□□□□ 0.68
GAPDH-203ENST00000396858 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
GAPDH-203ENST00000396858 MIER1Q8N108 512 aa19.27■□□□□ 0.68
GAPDH-203ENST00000396858 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
GAPDH-203ENST00000396858 NPC1L1Q9UHC9 1359 aa19.26■□□□□ 0.67
GAPDH-203ENST00000396858 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
GAPDH-203ENST00000396858 PIK3C2AO00443 1686 aa19.25■□□□□ 0.67
GAPDH-203ENST00000396858 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
GAPDH-203ENST00000396858 NSD2O96028 1365 aa19.24■□□□□ 0.67
GAPDH-203ENST00000396858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.67
GAPDH-203ENST00000396858 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
GAPDH-203ENST00000396858 TRPM3Q9HCF6 1732 aaPredicted RBP19.24■□□□□ 0.67
GAPDH-203ENST00000396858 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
GAPDH-203ENST00000396858 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms