RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
CCHCR1-203ENST00000396268 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
CCHCR1-203ENST00000396268 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.53
CCHCR1-203ENST00000396268 ZMYM3Q14202 1370 aa18.33■□□□□ 0.53
CCHCR1-203ENST00000396268 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-203ENST00000396268 INSRP06213 1382 aa18.33■□□□□ 0.52
CCHCR1-203ENST00000396268 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-203ENST00000396268 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.52
CCHCR1-203ENST00000396268 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
CCHCR1-203ENST00000396268 PLEKHH1Q9ULM0 1364 aa18.32■□□□□ 0.52
CCHCR1-203ENST00000396268 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
CCHCR1-203ENST00000396268 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
CCHCR1-203ENST00000396268 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-203ENST00000396268 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
CCHCR1-203ENST00000396268 RPGRIP1LQ68CZ1 1315 aa18.3■□□□□ 0.52
CCHCR1-203ENST00000396268 CDCA8Q53HL2 280 aa18.3■□□□□ 0.52
CCHCR1-203ENST00000396268 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
CCHCR1-203ENST00000396268 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
CCHCR1-203ENST00000396268 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-203ENST00000396268 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
CCHCR1-203ENST00000396268 STK26Q9P289 416 aa18.28■□□□□ 0.52
CCHCR1-203ENST00000396268 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCHCR1-203ENST00000396268 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.52
CCHCR1-203ENST00000396268 ADGRB1O14514 1584 aa18.27■□□□□ 0.52
CCHCR1-203ENST00000396268 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.51
CCHCR1-203ENST00000396268 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-203ENST00000396268 DAXXQ9UER7 740 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-203ENST00000396268 SPATA31D1Q6ZQQ2 1576 aa18.26■□□□□ 0.51
CCHCR1-203ENST00000396268 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
CCHCR1-203ENST00000396268 RGS3P49796 1198 aa18.24■□□□□ 0.51
CCHCR1-203ENST00000396268 NFKBIBQ15653 356 aa18.24■□□□□ 0.51
CCHCR1-203ENST00000396268 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-203ENST00000396268 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-203ENST00000396268 APAF1O14727 1248 aa18.23■□□□□ 0.51
CCHCR1-203ENST00000396268 GSE1Q14687 1217 aa18.23■□□□□ 0.51
CCHCR1-203ENST00000396268 USP35Q9P2H5 1018 aa18.23■□□□□ 0.51
CCHCR1-203ENST00000396268 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
CCHCR1-203ENST00000396268 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
CCHCR1-203ENST00000396268 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-203ENST00000396268 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
CCHCR1-203ENST00000396268 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
CCHCR1-203ENST00000396268 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
CCHCR1-203ENST00000396268 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
CCHCR1-203ENST00000396268 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
CCHCR1-203ENST00000396268 TNRQ92752 1358 aa18.19■□□□□ 0.5
CCHCR1-203ENST00000396268 BCAR3O75815 825 aa18.18■□□□□ 0.5
CCHCR1-203ENST00000396268 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
CCHCR1-203ENST00000396268 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
CCHCR1-203ENST00000396268 MYOM1P52179 1685 aa18.15■□□□□ 0.5
CCHCR1-203ENST00000396268 FRAT2O75474 233 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-203ENST00000396268 ARXQ96QS3 562 aa18.15■□□□□ 0.5
CCHCR1-203ENST00000396268 QRICH2Q9H0J4 1663 aa18.15■□□□□ 0.5
CCHCR1-203ENST00000396268 C8orf34Q49A92 452 aa18.15■□□□□ 0.5
CCHCR1-203ENST00000396268 MYO3AQ8NEV4 1616 aa18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 ALKQ9UM73 1620 aa18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 ARHGEF28Q8N1W1 1705 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 PTPRMP28827 1452 aa18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 E9PSI1 815 aa18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
CCHCR1-203ENST00000396268 CARD14Q9BXL6 1004 aa18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 KDM5AP29375 1690 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 MINK1Q8N4C8 1332 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 TRMT2AQ8IZ69 625 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-203ENST00000396268 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-203ENST00000396268 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
CCHCR1-203ENST00000396268 YTHDC2Q9H6S0 1430 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-203ENST00000396268 C3P01024 1663 aa18.11■□□□□ 0.49
CCHCR1-203ENST00000396268 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
CCHCR1-203ENST00000396268 LTKP29376 864 aa18.1■□□□□ 0.49
CCHCR1-203ENST00000396268 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
CCHCR1-203ENST00000396268 METP08581 1390 aa18.09■□□□□ 0.49
CCHCR1-203ENST00000396268 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
CCHCR1-203ENST00000396268 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.48
CCHCR1-203ENST00000396268 POGKQ9P215 609 aa18.07■□□□□ 0.48
CCHCR1-203ENST00000396268 UBR1Q8IWV7 1749 aa18.07■□□□□ 0.48
CCHCR1-203ENST00000396268 IGHDP01880 384 aa18.07■□□□□ 0.48
CCHCR1-203ENST00000396268 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
CCHCR1-203ENST00000396268 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
CCHCR1-203ENST00000396268 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
CCHCR1-203ENST00000396268 PANK1Q8TE04 598 aa18.06■□□□□ 0.48
CCHCR1-203ENST00000396268 TMEM2Q9UHN6 1383 aa18.06■□□□□ 0.48
CCHCR1-203ENST00000396268 RRP7AQ9Y3A4 280 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-203ENST00000396268 TXNDC2Q86VQ3 553 aa18.04■□□□□ 0.48
CCHCR1-203ENST00000396268 WWC1Q8IX03 1113 aa18.04■□□□□ 0.48
CCHCR1-203ENST00000396268 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
CCHCR1-203ENST00000396268 SETD1AO15047 1707 aaKnown RBP18.04■□□□□ 0.48
CCHCR1-203ENST00000396268 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
CCHCR1-203ENST00000396268 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
CCHCR1-203ENST00000396268 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
CCHCR1-203ENST00000396268 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
CCHCR1-203ENST00000396268 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
CCHCR1-203ENST00000396268 PDE3AQ14432 1141 aa18.01■□□□□ 0.47
CCHCR1-203ENST00000396268 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCHCR1-203ENST00000396268 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms