RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
MSH5-205ENST00000395853 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
MSH5-205ENST00000395853 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
MSH5-205ENST00000395853 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
MSH5-205ENST00000395853 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
MSH5-205ENST00000395853 TONSLQ96HA7 1378 aa11.52□□□□□ -0.56
MSH5-205ENST00000395853 ROCK1Q13464 1354 aa11.51□□□□□ -0.57
MSH5-205ENST00000395853 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
MSH5-205ENST00000395853 MAST1Q9Y2H9 1570 aa11.51□□□□□ -0.57
MSH5-205ENST00000395853 MPHOSPH9Q99550 1183 aa11.51□□□□□ -0.57
MSH5-205ENST00000395853 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
MSH5-205ENST00000395853 STRCP1A6NGW2 1772 aa11.51□□□□□ -0.57
MSH5-205ENST00000395853 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
MSH5-205ENST00000395853 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
MSH5-205ENST00000395853 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
MSH5-205ENST00000395853 ANP32BQ92688 251 aaKnown RBP11.51□□□□□ -0.57
MSH5-205ENST00000395853 ABCC3O15438 1527 aa11.5□□□□□ -0.57
MSH5-205ENST00000395853 DMTNQ08495 405 aa11.5□□□□□ -0.57
MSH5-205ENST00000395853 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
MSH5-205ENST00000395853 ERVK-7P63135 1459 aa11.5□□□□□ -0.57
MSH5-205ENST00000395853 ANP32CO43423 234 aa11.5□□□□□ -0.57
MSH5-205ENST00000395853 IRX3P78415 501 aaPredicted RBP11.5□□□□□ -0.57
MSH5-205ENST00000395853 HNRNPUQ00839 825 aaKnown RBP eCLIP11.5□□□□□ -0.57
MSH5-205ENST00000395853 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
MSH5-205ENST00000395853 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
MSH5-205ENST00000395853 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
MSH5-205ENST00000395853 SLIT1O75093 1534 aa11.48□□□□□ -0.57
MSH5-205ENST00000395853 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
MSH5-205ENST00000395853 KCNA4P22459 653 aa11.47□□□□□ -0.57
MSH5-205ENST00000395853 UBR1Q8IWV7 1749 aa11.47□□□□□ -0.57
MSH5-205ENST00000395853 CROCC2H7BZ55 1655 aa11.46□□□□□ -0.57
MSH5-205ENST00000395853 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
MSH5-205ENST00000395853 FAM135BQ49AJ0 1406 aa11.46□□□□□ -0.57
MSH5-205ENST00000395853 ARHGAP31Q2M1Z3 1444 aa11.46□□□□□ -0.58
MSH5-205ENST00000395853 KIF20AO95235 890 aa11.45□□□□□ -0.58
MSH5-205ENST00000395853 MROH1Q8NDA8 1641 aa11.45□□□□□ -0.58
MSH5-205ENST00000395853 FRAT2O75474 233 aaPredicted RBP11.44□□□□□ -0.58
MSH5-205ENST00000395853 RGS17Q9UGC6 210 aaPredicted RBP11.44□□□□□ -0.58
MSH5-205ENST00000395853 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
MSH5-205ENST00000395853 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
MSH5-205ENST00000395853 DUOX2Q9NRD8 1548 aa11.43□□□□□ -0.58
MSH5-205ENST00000395853 XIRP1Q702N8 1843 aaKnown RBP11.43□□□□□ -0.58
MSH5-205ENST00000395853 DNTTIP2Q5QJE6 756 aaKnown RBP11.43□□□□□ -0.58
MSH5-205ENST00000395853 PRDM10Q9NQV6 1147 aa11.43□□□□□ -0.58
MSH5-205ENST00000395853 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
MSH5-205ENST00000395853 MTERF4Q7Z6M4 381 aaKnown RBP11.42□□□□□ -0.58
MSH5-205ENST00000395853 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
MSH5-205ENST00000395853 ANKRD30BQ9BXX2 1392 aa11.42□□□□□ -0.58
MSH5-205ENST00000395853 TAF3Q5VWG9 929 aa11.42□□□□□ -0.58
MSH5-205ENST00000395853 TXNDC2Q86VQ3 553 aa11.42□□□□□ -0.58
MSH5-205ENST00000395853 CEP152O94986 1710 aa11.41□□□□□ -0.58
MSH5-205ENST00000395853 ANKRD30AQ9BXX3 1397 aa11.41□□□□□ -0.58
MSH5-205ENST00000395853 CLGNO14967 610 aa11.41□□□□□ -0.58
MSH5-205ENST00000395853 PDE4AP27815 886 aa11.41□□□□□ -0.58
MSH5-205ENST00000395853 L3MBTL2Q969R5 705 aa11.41□□□□□ -0.58
MSH5-205ENST00000395853 PRDM15P57071 1507 aaPredicted RBP11.41□□□□□ -0.58
MSH5-205ENST00000395853 ESPNB1AK53 854 aa11.4□□□□□ -0.58
MSH5-205ENST00000395853 LTKP29376 864 aa11.4□□□□□ -0.58
MSH5-205ENST00000395853 KIAA1211Q6ZU35 1233 aa11.4□□□□□ -0.58
MSH5-205ENST00000395853 TCERG1O14776 1098 aaKnown RBP11.4□□□□□ -0.58
MSH5-205ENST00000395853 ZSCAN20P17040 1043 aaPredicted RBP11.4□□□□□ -0.58
MSH5-205ENST00000395853 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
MSH5-205ENST00000395853 ERBINQ96RT1 1412 aa11.39□□□□□ -0.59
MSH5-205ENST00000395853 TMEM2Q9UHN6 1383 aa11.39□□□□□ -0.59
MSH5-205ENST00000395853 MMP14P50281 582 aa11.39□□□□□ -0.59
MSH5-205ENST00000395853 BACH2Q9BYV9 841 aa11.39□□□□□ -0.59
MSH5-205ENST00000395853 FAM13BQ9NYF5 915 aa11.38□□□□□ -0.59
MSH5-205ENST00000395853 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
MSH5-205ENST00000395853 ANKRD50Q9ULJ7 1429 aa11.38□□□□□ -0.59
MSH5-205ENST00000395853 LETM1O95202 739 aaPredicted RBP11.38□□□□□ -0.59
MSH5-205ENST00000395853 KCNA6P17658 529 aa11.38□□□□□ -0.59
MSH5-205ENST00000395853 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
MSH5-205ENST00000395853 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
MSH5-205ENST00000395853 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
MSH5-205ENST00000395853 POGKQ9P215 609 aa11.37□□□□□ -0.59
MSH5-205ENST00000395853 RPRD2Q5VT52 1461 aaKnown RBP11.37□□□□□ -0.59
MSH5-205ENST00000395853 FAM193AP78312 1265 aa11.37□□□□□ -0.59
MSH5-205ENST00000395853 CFAP65Q6ZU64 1925 aaKnown RBP11.37□□□□□ -0.59
MSH5-205ENST00000395853 PIK3C2BO00750 1634 aa11.37□□□□□ -0.59
MSH5-205ENST00000395853 XRCC6P12956 609 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSH5-205ENST00000395853 TERF1P54274 439 aa11.37□□□□□ -0.59
MSH5-205ENST00000395853 RIPK4P57078 832 aa11.37□□□□□ -0.59
MSH5-205ENST00000395853 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
MSH5-205ENST00000395853 NKTRP30414 1462 aaKnown RBP11.37□□□□□ -0.59
MSH5-205ENST00000395853 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
MSH5-205ENST00000395853 NWD1Q149M9 1564 aa11.36□□□□□ -0.59
MSH5-205ENST00000395853 TMEM94Q12767 1356 aa11.36□□□□□ -0.59
MSH5-205ENST00000395853 EFCAB6Q5THR3 1501 aa11.36□□□□□ -0.59
MSH5-205ENST00000395853 E9PSI1 815 aa11.36□□□□□ -0.59
MSH5-205ENST00000395853 TET3O43151 1660 aa11.35□□□□□ -0.59
MSH5-205ENST00000395853 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
MSH5-205ENST00000395853 ROBO1Q9Y6N7 1651 aa11.35□□□□□ -0.59
MSH5-205ENST00000395853 KANK1Q14678 1352 aa11.35□□□□□ -0.59
MSH5-205ENST00000395853 APPP05067 770 aa11.35□□□□□ -0.59
MSH5-205ENST00000395853 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
MSH5-205ENST00000395853 NBPF8Q3BBV2 869 aa11.35□□□□□ -0.59
MSH5-205ENST00000395853 PTMAP06454 111 aaKnown RBP11.34□□□□□ -0.59
MSH5-205ENST00000395853 MS4A1P11836 297 aa11.34□□□□□ -0.59
MSH5-205ENST00000395853 ADRA2BP18089 450 aa11.34□□□□□ -0.59
MSH5-205ENST00000395853 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms