RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 YEATS2Q9ULM3 1422 aa14.72□□□□□ -0.05
UBE2D3-209ENST00000394804 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-209ENST00000394804 SLC12A5Q9H2X9 1139 aa14.71□□□□□ -0.06
UBE2D3-209ENST00000394804 INSRP06213 1382 aa14.71□□□□□ -0.06
UBE2D3-209ENST00000394804 TMEM132EQ6IEE7 984 aa14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 DDX19BQ9UMR2 479 aa14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 WWC1Q8IX03 1113 aa14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 GZF1Q9H116 711 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 IL27Q8NEV9 243 aa14.7□□□□□ -0.06
UBE2D3-209ENST00000394804 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
UBE2D3-209ENST00000394804 ARHGEF5Q12774 1597 aa14.69□□□□□ -0.06
UBE2D3-209ENST00000394804 ASXL1Q8IXJ9 1541 aa14.69□□□□□ -0.06
UBE2D3-209ENST00000394804 GOLGA6L3A6NEY3 463 aa14.68□□□□□ -0.06
UBE2D3-209ENST00000394804 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
UBE2D3-209ENST00000394804 PLEKHH1Q9ULM0 1364 aa14.67□□□□□ -0.06
UBE2D3-209ENST00000394804 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
UBE2D3-209ENST00000394804 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
UBE2D3-209ENST00000394804 PDZRN3Q9UPQ7 1066 aa14.67□□□□□ -0.06
UBE2D3-209ENST00000394804 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.67□□□□□ -0.06
UBE2D3-209ENST00000394804 NSD3Q9BZ95 1437 aa14.66□□□□□ -0.06
UBE2D3-209ENST00000394804 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
UBE2D3-209ENST00000394804 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
UBE2D3-209ENST00000394804 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
UBE2D3-209ENST00000394804 ZMYM4Q5VZL5 1548 aa14.65□□□□□ -0.06
UBE2D3-209ENST00000394804 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-209ENST00000394804 NAP1L5Q96NT1 182 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-209ENST00000394804 BRPF3Q9ULD4 1205 aa14.65□□□□□ -0.06
UBE2D3-209ENST00000394804 ADGRF5Q8IZF2 1346 aa14.65□□□□□ -0.06
UBE2D3-209ENST00000394804 PIK3C2GO75747 1445 aa14.65□□□□□ -0.06
UBE2D3-209ENST00000394804 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-209ENST00000394804 KDM5DQ9BY66 1539 aa14.64□□□□□ -0.07
UBE2D3-209ENST00000394804 DIAPH1O60610 1272 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-209ENST00000394804 RIPK4P57078 832 aa14.64□□□□□ -0.07
UBE2D3-209ENST00000394804 KIF16BQ96L93 1317 aa14.64□□□□□ -0.07
UBE2D3-209ENST00000394804 CABP2Q9NPB3 220 aa14.64□□□□□ -0.07
UBE2D3-209ENST00000394804 GGNBP2Q9H3C7 697 aa14.63□□□□□ -0.07
UBE2D3-209ENST00000394804 CHMP5Q9NZZ3 219 aa14.63□□□□□ -0.07
UBE2D3-209ENST00000394804 PTMSP20962 102 aa14.63□□□□□ -0.07
UBE2D3-209ENST00000394804 C22orf23Q9BZE7 217 aa14.63□□□□□ -0.07
UBE2D3-209ENST00000394804 ATP7AQ04656 1500 aa14.63□□□□□ -0.07
UBE2D3-209ENST00000394804 FRMPD1Q5SYB0 1578 aa14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 ZFYVE16Q7Z3T8 1539 aa14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 DDX11L8A8MPP1 907 aa14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 RICTORQ6R327 1708 aa14.62□□□□□ -0.07
UBE2D3-209ENST00000394804 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-209ENST00000394804 EXOSC9Q06265 439 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-209ENST00000394804 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
UBE2D3-209ENST00000394804 MVPQ14764 893 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-209ENST00000394804 HECW2Q9P2P5 1572 aa14.6□□□□□ -0.07
UBE2D3-209ENST00000394804 C8orf34Q49A92 452 aa14.6□□□□□ -0.07
UBE2D3-209ENST00000394804 MLH3Q9UHC1 1453 aa14.6□□□□□ -0.07
UBE2D3-209ENST00000394804 ANKRD45Q5TZF3 282 aa14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 MAST1Q9Y2H9 1570 aa14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 TSR2Q969E8 191 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 KDM2BQ8NHM5 1336 aa14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
UBE2D3-209ENST00000394804 IGHDP01880 384 aa14.58□□□□□ -0.08
UBE2D3-209ENST00000394804 ATP10AO60312 1499 aa14.58□□□□□ -0.08
UBE2D3-209ENST00000394804 LNPKQ9C0E8 428 aa14.57□□□□□ -0.08
UBE2D3-209ENST00000394804 ELL2O00472 640 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-209ENST00000394804 RTEL1-TNFRSF6BF6WH68 1400 aa14.57□□□□□ -0.08
UBE2D3-209ENST00000394804 KIDINS220Q9ULH0 1771 aa14.56□□□□□ -0.08
UBE2D3-209ENST00000394804 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
UBE2D3-209ENST00000394804 APBB1O00213 710 aa14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 ATF7IPQ6VMQ6 1270 aa14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 NOS1P29475 1434 aa14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 POLR3AO14802 1390 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 RSPH6AQ9H0K4 717 aa14.55□□□□□ -0.08
UBE2D3-209ENST00000394804 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
UBE2D3-209ENST00000394804 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
UBE2D3-209ENST00000394804 PRDM15P57071 1507 aaPredicted RBP14.54□□□□□ -0.08
UBE2D3-209ENST00000394804 DIP2CQ9Y2E4 1556 aa14.53□□□□□ -0.08
UBE2D3-209ENST00000394804 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-209ENST00000394804 PLA2R1Q13018 1463 aa14.53□□□□□ -0.08
UBE2D3-209ENST00000394804 CARD14Q9BXL6 1004 aa14.53□□□□□ -0.08
UBE2D3-209ENST00000394804 CEBPAP49715 358 aaPredicted RBP14.52□□□□□ -0.08
UBE2D3-209ENST00000394804 INO80Q9ULG1 1556 aaPredicted RBP14.52□□□□□ -0.08
UBE2D3-209ENST00000394804 TMPOP42166 694 aaKnown RBP14.52□□□□□ -0.09
UBE2D3-209ENST00000394804 GNAI1P63096 354 aa14.52□□□□□ -0.09
UBE2D3-209ENST00000394804 API5Q9BZZ5 524 aaKnown RBP14.52□□□□□ -0.09
UBE2D3-209ENST00000394804 C14orf93Q9H972 538 aaKnown RBP14.52□□□□□ -0.09
UBE2D3-209ENST00000394804 ARHGEF40Q8TER5 1519 aa14.52□□□□□ -0.09
UBE2D3-209ENST00000394804 SOX12O15370 315 aa14.52□□□□□ -0.09
UBE2D3-209ENST00000394804 TRPM1Q7Z4N2 1603 aa14.51□□□□□ -0.09
UBE2D3-209ENST00000394804 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-209ENST00000394804 SKOR2Q2VWA4 1001 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-209ENST00000394804 COG3Q96JB2 828 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 MCCP23508 829 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 NSD2O96028 1365 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 ATAD2Q6PL18 1390 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms