RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CDC45O75419 566 aa15.63■□□□□ 0.09
DNMT3A-204ENST00000380756 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
DNMT3A-204ENST00000380756 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
DNMT3A-204ENST00000380756 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
DNMT3A-204ENST00000380756 CT47B1P0C2W7 299 aaPredicted RBP15.62■□□□□ 0.09
DNMT3A-204ENST00000380756 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
DNMT3A-204ENST00000380756 UGGT2Q9NYU1 1516 aa15.62■□□□□ 0.09
DNMT3A-204ENST00000380756 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
DNMT3A-204ENST00000380756 ANO2Q9NQ90 1003 aa15.61■□□□□ 0.09
DNMT3A-204ENST00000380756 ATP6V1DQ9Y5K8 247 aa15.6■□□□□ 0.09
DNMT3A-204ENST00000380756 THOC2Q8NI27 1593 aaKnown RBP15.6■□□□□ 0.09
DNMT3A-204ENST00000380756 MCTP1Q6DN14 999 aa15.59■□□□□ 0.09
DNMT3A-204ENST00000380756 FKBP5Q13451 457 aaPredicted RBP15.59■□□□□ 0.09
DNMT3A-204ENST00000380756 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
DNMT3A-204ENST00000380756 GCC1Q96CN9 775 aa15.58■□□□□ 0.08
DNMT3A-204ENST00000380756 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
DNMT3A-204ENST00000380756 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
DNMT3A-204ENST00000380756 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
DNMT3A-204ENST00000380756 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
DNMT3A-204ENST00000380756 RARSP54136 660 aaKnown RBP15.57■□□□□ 0.08
DNMT3A-204ENST00000380756 TWISTNBQ3B726 338 aaPredicted RBP15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 HSP90B1P14625 803 aaKnown RBP15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 DIAPH3Q9NSV4 1193 aa15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 MCM4P33991 863 aa15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 NASPP49321 788 aaPredicted RBP15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 NKTRP30414 1462 aaKnown RBP15.56■□□□□ 0.08
DNMT3A-204ENST00000380756 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 DISP3Q9P2K9 1392 aa15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 NSD3Q9BZ95 1437 aa15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 GPATCH8Q9UKJ3 1502 aaKnown RBP15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 GNL2Q13823 731 aaKnown RBP15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 LRPPRCP42704 1394 aaKnown RBP15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 TEFQ10587 303 aa15.55■□□□□ 0.08
DNMT3A-204ENST00000380756 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
DNMT3A-204ENST00000380756 CHMP3Q9Y3E7 222 aa15.54■□□□□ 0.08
DNMT3A-204ENST00000380756 RUFY2Q8WXA3 655 aa15.53■□□□□ 0.08
DNMT3A-204ENST00000380756 RABEP1Q15276 862 aa15.53■□□□□ 0.08
DNMT3A-204ENST00000380756 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
DNMT3A-204ENST00000380756 TMPOP42166 694 aaKnown RBP15.53■□□□□ 0.08
DNMT3A-204ENST00000380756 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.08
DNMT3A-204ENST00000380756 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
DNMT3A-204ENST00000380756 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
DNMT3A-204ENST00000380756 CABP1Q9NZU7 370 aa15.52■□□□□ 0.08
DNMT3A-204ENST00000380756 ZKSCAN1P17029 563 aaPredicted RBP15.52■□□□□ 0.07
DNMT3A-204ENST00000380756 GORABQ5T7V8 394 aa15.52■□□□□ 0.07
DNMT3A-204ENST00000380756 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.07
DNMT3A-204ENST00000380756 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
DNMT3A-204ENST00000380756 TCOF1Q13428 1488 aaKnown RBP15.51■□□□□ 0.07
DNMT3A-204ENST00000380756 C9orf78Q9NZ63 289 aaPredicted RBP15.51■□□□□ 0.07
DNMT3A-204ENST00000380756 KIF3AQ9Y496 699 aa15.51■□□□□ 0.07
DNMT3A-204ENST00000380756 CAVIN1Q6NZI2 390 aaKnown RBP15.51■□□□□ 0.07
DNMT3A-204ENST00000380756 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.51■□□□□ 0.07
DNMT3A-204ENST00000380756 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
DNMT3A-204ENST00000380756 ISY1Q9ULR0 285 aaKnown RBP15.5■□□□□ 0.07
DNMT3A-204ENST00000380756 KIF14Q15058 1648 aa15.5■□□□□ 0.07
DNMT3A-204ENST00000380756 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
DNMT3A-204ENST00000380756 NEK4P51957 841 aa15.5■□□□□ 0.07
DNMT3A-204ENST00000380756 ZNF428Q96B54 188 aa15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 SLC52A1Q9NWF4 448 aa15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 K7ELQ4 463 aaPredicted RBP15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 CDK19Q9BWU1 502 aa15.49■□□□□ 0.07
DNMT3A-204ENST00000380756 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 FAM13BQ9NYF5 915 aa15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 FCHSD2O94868 740 aa15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 RNF214Q8ND24 703 aa15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 SMC3Q9UQE7 1217 aa15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
DNMT3A-204ENST00000380756 H3BQV1 296 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 IFIT2P09913 472 aaKnown RBP15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 IFFO2Q5TF58 517 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 GRPEL1Q9HAV7 217 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 GNAI3P08754 354 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 AMER1Q5JTC6 1135 aaPredicted RBP15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 IGHDP01880 384 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 C1orf141Q5JVX7 400 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 TPM4P67936 248 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 FAM184AQ8NB25 1140 aa15.47■□□□□ 0.07
DNMT3A-204ENST00000380756 SCAF11Q99590 1463 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 VPS37CA5D8V6 355 aaPredicted RBP15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 TBC1D2Q9BYX2 928 aa15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 ATAD2Q6PL18 1390 aa15.46■□□□□ 0.07
DNMT3A-204ENST00000380756 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
DNMT3A-204ENST00000380756 MBD3O95983 291 aa15.46■□□□□ 0.06
DNMT3A-204ENST00000380756 HSP90AB4PQ58FF6 505 aa15.45■□□□□ 0.06
DNMT3A-204ENST00000380756 TAF7LQ5H9L4 462 aa15.45■□□□□ 0.06
DNMT3A-204ENST00000380756 SULT6B1Q6IMI4 303 aa15.45■□□□□ 0.06
DNMT3A-204ENST00000380756 MCM2P49736 904 aa15.45■□□□□ 0.06
DNMT3A-204ENST00000380756 GOLGA6L19H0YKK7 550 aa15.44■□□□□ 0.06
DNMT3A-204ENST00000380756 NEXNQ0ZGT2 675 aa15.44■□□□□ 0.06
DNMT3A-204ENST00000380756 TESK2Q96S53 571 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms