RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
SMARCE1-203ENST00000377808 POGKQ9P215 609 aa16.78■□□□□ 0.28
SMARCE1-203ENST00000377808 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
SMARCE1-203ENST00000377808 ORAI2Q96SN7 254 aa16.77■□□□□ 0.28
SMARCE1-203ENST00000377808 TRAK1Q9UPV9 953 aa16.77■□□□□ 0.28
SMARCE1-203ENST00000377808 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
SMARCE1-203ENST00000377808 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
SMARCE1-203ENST00000377808 ESCO1Q5FWF5 840 aa16.76■□□□□ 0.27
SMARCE1-203ENST00000377808 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
SMARCE1-203ENST00000377808 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
SMARCE1-203ENST00000377808 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
SMARCE1-203ENST00000377808 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-203ENST00000377808 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-203ENST00000377808 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
SMARCE1-203ENST00000377808 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-203ENST00000377808 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
SMARCE1-203ENST00000377808 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
SMARCE1-203ENST00000377808 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
SMARCE1-203ENST00000377808 LRRC59Q96AG4 307 aaKnown RBP16.72■□□□□ 0.27
SMARCE1-203ENST00000377808 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
SMARCE1-203ENST00000377808 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
SMARCE1-203ENST00000377808 DLC1Q96QB1 1528 aa16.72■□□□□ 0.27
SMARCE1-203ENST00000377808 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
SMARCE1-203ENST00000377808 LRP6O75581 1613 aa16.7■□□□□ 0.26
SMARCE1-203ENST00000377808 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
SMARCE1-203ENST00000377808 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
SMARCE1-203ENST00000377808 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
SMARCE1-203ENST00000377808 FOXO3O43524 673 aa16.69■□□□□ 0.26
SMARCE1-203ENST00000377808 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
SMARCE1-203ENST00000377808 SOCS7O14512 581 aa16.68■□□□□ 0.26
SMARCE1-203ENST00000377808 RGS17Q9UGC6 210 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-203ENST00000377808 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
SMARCE1-203ENST00000377808 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
SMARCE1-203ENST00000377808 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
SMARCE1-203ENST00000377808 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
SMARCE1-203ENST00000377808 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
SMARCE1-203ENST00000377808 ARHGEF28Q8N1W1 1705 aaKnown RBP16.64■□□□□ 0.25
SMARCE1-203ENST00000377808 KIAA1210Q9ULL0 1709 aa16.64■□□□□ 0.25
SMARCE1-203ENST00000377808 KIF1AQ12756 1690 aa16.63■□□□□ 0.25
SMARCE1-203ENST00000377808 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
SMARCE1-203ENST00000377808 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
SMARCE1-203ENST00000377808 POTEAQ6S8J7 498 aa16.63■□□□□ 0.25
SMARCE1-203ENST00000377808 C8orf37Q96NL8 207 aa16.63■□□□□ 0.25
SMARCE1-203ENST00000377808 RGPD8O14715 1765 aaPredicted RBP16.62■□□□□ 0.25
SMARCE1-203ENST00000377808 PMFBP1Q8TBY8 1022 aa16.62■□□□□ 0.25
SMARCE1-203ENST00000377808 EIF3AQ14152 1382 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-203ENST00000377808 PXDNQ92626 1479 aa16.61■□□□□ 0.25
SMARCE1-203ENST00000377808 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
SMARCE1-203ENST00000377808 WASLO00401 505 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-203ENST00000377808 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
SMARCE1-203ENST00000377808 ZNF772Q68DY9 489 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-203ENST00000377808 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
SMARCE1-203ENST00000377808 PSME1Q06323 249 aa16.59■□□□□ 0.25
SMARCE1-203ENST00000377808 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
SMARCE1-203ENST00000377808 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
SMARCE1-203ENST00000377808 AFF2P51816 1311 aa16.58■□□□□ 0.25
SMARCE1-203ENST00000377808 TULP4Q9NRJ4 1543 aa16.58■□□□□ 0.24
SMARCE1-203ENST00000377808 USP32Q8NFA0 1604 aa16.58■□□□□ 0.24
SMARCE1-203ENST00000377808 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
SMARCE1-203ENST00000377808 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
SMARCE1-203ENST00000377808 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
SMARCE1-203ENST00000377808 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
SMARCE1-203ENST00000377808 HAP1P54257 671 aaPredicted RBP16.55■□□□□ 0.24
SMARCE1-203ENST00000377808 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
SMARCE1-203ENST00000377808 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
SMARCE1-203ENST00000377808 COL22A1Q8NFW1 1626 aaPredicted RBP16.55■□□□□ 0.24
SMARCE1-203ENST00000377808 SPATA31A3Q5VYP0 1347 aa16.55■□□□□ 0.24
SMARCE1-203ENST00000377808 TRPM1Q7Z4N2 1603 aa16.54■□□□□ 0.24
SMARCE1-203ENST00000377808 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
SMARCE1-203ENST00000377808 GPRASP1Q5JY77 1395 aa16.53■□□□□ 0.24
SMARCE1-203ENST00000377808 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-203ENST00000377808 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
SMARCE1-203ENST00000377808 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-203ENST00000377808 PCGF6Q9BYE7 350 aa16.52■□□□□ 0.24
SMARCE1-203ENST00000377808 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 RXRBP28702 533 aa16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 ATP7BP35670 1465 aa16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 ITSN1Q15811 1721 aa16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
SMARCE1-203ENST00000377808 USP21Q9UK80 565 aa16.5■□□□□ 0.23
SMARCE1-203ENST00000377808 ARHGEF10O15013 1369 aa16.5■□□□□ 0.23
SMARCE1-203ENST00000377808 CABLES1Q8TDN4 633 aa16.49■□□□□ 0.23
SMARCE1-203ENST00000377808 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-203ENST00000377808 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
SMARCE1-203ENST00000377808 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
SMARCE1-203ENST00000377808 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
SMARCE1-203ENST00000377808 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-203ENST00000377808 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-203ENST00000377808 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-203ENST00000377808 ACEP12821 1306 aa16.44■□□□□ 0.22
SMARCE1-203ENST00000377808 EVC2Q86UK5 1308 aa16.44■□□□□ 0.22
SMARCE1-203ENST00000377808 PPIP5K1Q6PFW1 1433 aa16.44■□□□□ 0.22
SMARCE1-203ENST00000377808 TOPAZ1Q8N9V7 1692 aa16.44■□□□□ 0.22
SMARCE1-203ENST00000377808 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-203ENST00000377808 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-203ENST00000377808 RALGAPBQ86X10 1494 aa16.43■□□□□ 0.22
SMARCE1-203ENST00000377808 NUTM2GQ5VZR2 741 aa16.42■□□□□ 0.22
SMARCE1-203ENST00000377808 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms