RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
SSX1-201ENST00000376919 GPATCH8Q9UKJ3 1502 aaKnown RBP8.58□□□□□ -1.04
SSX1-201ENST00000376919 PLEKHH2Q8IVE3 1493 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 SCAPERQ9BY12 1400 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 IRF6O14896 467 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 GNPATO15228 680 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 TRAK2O60296 914 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 PHF14O94880 888 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
SSX1-201ENST00000376919 EPAS1Q99814 870 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
SSX1-201ENST00000376919 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
SSX1-201ENST00000376919 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
SSX1-201ENST00000376919 POGZQ7Z3K3 1410 aa8.56□□□□□ -1.04
SSX1-201ENST00000376919 CAMSAP2Q08AD1 1489 aa8.56□□□□□ -1.04
SSX1-201ENST00000376919 MYOM3Q5VTT5 1437 aa8.55□□□□□ -1.04
SSX1-201ENST00000376919 ZFYVE16Q7Z3T8 1539 aa8.55□□□□□ -1.04
SSX1-201ENST00000376919 ARHGEF40Q8TER5 1519 aa8.55□□□□□ -1.04
SSX1-201ENST00000376919 PTPN23Q9H3S7 1636 aa8.55□□□□□ -1.04
SSX1-201ENST00000376919 RAPGEF3O95398 923 aa8.55□□□□□ -1.04
SSX1-201ENST00000376919 POTEJP0CG39 1038 aa8.55□□□□□ -1.04
SSX1-201ENST00000376919 PPARGC1BQ86YN6 1023 aaKnown RBP8.55□□□□□ -1.04
SSX1-201ENST00000376919 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
SSX1-201ENST00000376919 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
SSX1-201ENST00000376919 KDM4FA0A1W2PPD8 638 aa8.54□□□□□ -1.04
SSX1-201ENST00000376919 EN1Q05925 392 aaPredicted RBP8.54□□□□□ -1.04
SSX1-201ENST00000376919 PTGDRQ13258 359 aa8.54□□□□□ -1.04
SSX1-201ENST00000376919 CLUAP1Q96AJ1 413 aa8.54□□□□□ -1.04
SSX1-201ENST00000376919 ZMYM4Q5VZL5 1548 aa8.54□□□□□ -1.04
SSX1-201ENST00000376919 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
SSX1-201ENST00000376919 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
SSX1-201ENST00000376919 POTEB2H3BUK9 544 aa8.52□□□□□ -1.05
SSX1-201ENST00000376919 FECHP22830 423 aa8.52□□□□□ -1.05
SSX1-201ENST00000376919 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
SSX1-201ENST00000376919 MIA2Q96PC5 1412 aa8.52□□□□□ -1.05
SSX1-201ENST00000376919 CROCC2H7BZ55 1655 aa8.52□□□□□ -1.05
SSX1-201ENST00000376919 KDM5CP41229 1560 aa8.52□□□□□ -1.05
SSX1-201ENST00000376919 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 MAP3K7O43318 606 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.05
SSX1-201ENST00000376919 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
SSX1-201ENST00000376919 DOK7Q18PE1 504 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 TYW1BQ6NUM6 668 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 SLAIN1Q8ND83 568 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 FGD6Q6ZV73 1430 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
SSX1-201ENST00000376919 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
SSX1-201ENST00000376919 ATP7AQ04656 1500 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
SSX1-201ENST00000376919 ARHGEF5Q12774 1597 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 MCM6Q14566 821 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 FBXW7Q969H0 707 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 NPDC1Q9NQX5 325 aaPredicted RBP8.5□□□□□ -1.05
SSX1-201ENST00000376919 INO80Q9ULG1 1556 aaPredicted RBP8.5□□□□□ -1.05
SSX1-201ENST00000376919 KIAA1107Q9UPP5 1409 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 TRAPPC8Q9Y2L5 1435 aa8.5□□□□□ -1.05
SSX1-201ENST00000376919 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
SSX1-201ENST00000376919 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
SSX1-201ENST00000376919 ADGBQ8N7X0 1667 aa8.49□□□□□ -1.05
SSX1-201ENST00000376919 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
SSX1-201ENST00000376919 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
SSX1-201ENST00000376919 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
SSX1-201ENST00000376919 RBM33Q96EV2 1170 aaKnown RBP8.49□□□□□ -1.05
SSX1-201ENST00000376919 DNMT1P26358 1616 aaKnown RBP8.49□□□□□ -1.05
SSX1-201ENST00000376919 DIP2CQ9Y2E4 1556 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 YEATS2Q9ULM3 1422 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 TSPY4P0CV99 314 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 TSPY10P0CW01 314 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 FOSBP53539 338 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 MAMSTRQ6ZN01 415 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
SSX1-201ENST00000376919 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
SSX1-201ENST00000376919 RIMBP2O15034 1052 aa8.47□□□□□ -1.05
SSX1-201ENST00000376919 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
SSX1-201ENST00000376919 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
SSX1-201ENST00000376919 KCTD17Q8N5Z5 321 aa8.47□□□□□ -1.05
SSX1-201ENST00000376919 ATP10AO60312 1499 aa8.46□□□□□ -1.05
SSX1-201ENST00000376919 TCOF1Q13428 1488 aaKnown RBP8.46□□□□□ -1.05
SSX1-201ENST00000376919 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
SSX1-201ENST00000376919 NUDT7P0C024 238 aa8.46□□□□□ -1.06
SSX1-201ENST00000376919 ARSIQ5FYB1 569 aa8.46□□□□□ -1.06
SSX1-201ENST00000376919 GIGYF2Q6Y7W6 1299 aaKnown RBP8.46□□□□□ -1.06
SSX1-201ENST00000376919 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.06
SSX1-201ENST00000376919 FER1L4A9Z1Z3 1794 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 MBD5Q9P267 1494 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 MAST1Q9Y2H9 1570 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 MS4A1P11836 297 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 ITGAEP38570 1179 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 GPR153Q6NV75 609 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
SSX1-201ENST00000376919 CCDC97Q96F63 343 aaPredicted RBP8.45□□□□□ -1.06
SSX1-201ENST00000376919 BCORL1Q5H9F3 1711 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 DAPK1P53355 1430 aa8.45□□□□□ -1.06
SSX1-201ENST00000376919 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms