RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
TNFRSF1B-201ENST00000376259 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1B-201ENST00000376259 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
TNFRSF1B-201ENST00000376259 DDX19BQ9UMR2 479 aa18.03■□□□□ 0.48
TNFRSF1B-201ENST00000376259 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF1B-201ENST00000376259 COL17A1Q9UMD9 1497 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1B-201ENST00000376259 MAGI2Q86UL8 1455 aa18.01■□□□□ 0.47
TNFRSF1B-201ENST00000376259 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
TNFRSF1B-201ENST00000376259 TRAK2O60296 914 aa18■□□□□ 0.47
TNFRSF1B-201ENST00000376259 PLCB2Q00722 1185 aa18■□□□□ 0.47
TNFRSF1B-201ENST00000376259 TRIM27P14373 513 aa18■□□□□ 0.47
TNFRSF1B-201ENST00000376259 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
TNFRSF1B-201ENST00000376259 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
TNFRSF1B-201ENST00000376259 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
TNFRSF1B-201ENST00000376259 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
TNFRSF1B-201ENST00000376259 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1B-201ENST00000376259 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
TNFRSF1B-201ENST00000376259 PANK2Q9BZ23 570 aa17.98■□□□□ 0.47
TNFRSF1B-201ENST00000376259 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-201ENST00000376259 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-201ENST00000376259 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
TNFRSF1B-201ENST00000376259 PLA2R1Q13018 1463 aa17.96■□□□□ 0.47
TNFRSF1B-201ENST00000376259 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
TNFRSF1B-201ENST00000376259 NOS1P29475 1434 aa17.95■□□□□ 0.46
TNFRSF1B-201ENST00000376259 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
TNFRSF1B-201ENST00000376259 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
TNFRSF1B-201ENST00000376259 DDX49Q9Y6V7 483 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1B-201ENST00000376259 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-201ENST00000376259 MCM4P33991 863 aa17.94■□□□□ 0.46
TNFRSF1B-201ENST00000376259 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1B-201ENST00000376259 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
TNFRSF1B-201ENST00000376259 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
TNFRSF1B-201ENST00000376259 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
TNFRSF1B-201ENST00000376259 GPRASP1Q5JY77 1395 aa17.94■□□□□ 0.46
TNFRSF1B-201ENST00000376259 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1B-201ENST00000376259 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1B-201ENST00000376259 BLMP54132 1417 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1B-201ENST00000376259 PTMAP06454 111 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1B-201ENST00000376259 ASXL1Q8IXJ9 1541 aa17.91■□□□□ 0.46
TNFRSF1B-201ENST00000376259 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
TNFRSF1B-201ENST00000376259 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1B-201ENST00000376259 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
TNFRSF1B-201ENST00000376259 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
TNFRSF1B-201ENST00000376259 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
TNFRSF1B-201ENST00000376259 LMOD2Q6P5Q4 547 aa17.9■□□□□ 0.46
TNFRSF1B-201ENST00000376259 MPNDQ8N594 471 aa17.9■□□□□ 0.46
TNFRSF1B-201ENST00000376259 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 FBXO31Q5XUX0 539 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 CASC1Q6TDU7 716 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 FAM83GA6ND36 823 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 IDI1Q13907 227 aa17.89■□□□□ 0.45
TNFRSF1B-201ENST00000376259 STAC3Q96MF2 364 aa17.88■□□□□ 0.45
TNFRSF1B-201ENST00000376259 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
TNFRSF1B-201ENST00000376259 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
TNFRSF1B-201ENST00000376259 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
TNFRSF1B-201ENST00000376259 ZNF521Q96K83 1311 aa17.87■□□□□ 0.45
TNFRSF1B-201ENST00000376259 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1B-201ENST00000376259 TXNDC2Q86VQ3 553 aa17.87■□□□□ 0.45
TNFRSF1B-201ENST00000376259 CHD1LQ86WJ1 897 aa17.87■□□□□ 0.45
TNFRSF1B-201ENST00000376259 RILPL2Q969X0 211 aa17.87■□□□□ 0.45
TNFRSF1B-201ENST00000376259 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
TNFRSF1B-201ENST00000376259 NUTM2GQ5VZR2 741 aa17.86■□□□□ 0.45
TNFRSF1B-201ENST00000376259 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
TNFRSF1B-201ENST00000376259 DDX11L8A8MPP1 907 aa17.85■□□□□ 0.45
TNFRSF1B-201ENST00000376259 SMARCA5O60264 1052 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1B-201ENST00000376259 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1B-201ENST00000376259 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
TNFRSF1B-201ENST00000376259 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
TNFRSF1B-201ENST00000376259 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
TNFRSF1B-201ENST00000376259 COG3Q96JB2 828 aa17.84■□□□□ 0.45
TNFRSF1B-201ENST00000376259 TSPYL6Q8N831 410 aa17.84■□□□□ 0.45
TNFRSF1B-201ENST00000376259 MSNP26038 577 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1B-201ENST00000376259 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.44
TNFRSF1B-201ENST00000376259 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.44
TNFRSF1B-201ENST00000376259 NUP160Q12769 1436 aa17.83■□□□□ 0.44
TNFRSF1B-201ENST00000376259 RNF214Q8ND24 703 aa17.83■□□□□ 0.44
TNFRSF1B-201ENST00000376259 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 NME9Q86XW9 330 aa17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 C14orf93Q9H972 538 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 NCKAP5LQ9HCH0 1330 aa17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 FYB1O15117 783 aa17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 GLIPR1L2Q4G1C9 344 aa17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 CHMP4BQ9H444 224 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1B-201ENST00000376259 PLCH2O75038 1416 aa17.81■□□□□ 0.44
TNFRSF1B-201ENST00000376259 CAVIN1Q6NZI2 390 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1B-201ENST00000376259 TSHZ3Q63HK5 1081 aa17.8■□□□□ 0.44
TNFRSF1B-201ENST00000376259 UGGT1Q9NYU2 1555 aa17.8■□□□□ 0.44
TNFRSF1B-201ENST00000376259 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
TNFRSF1B-201ENST00000376259 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
TNFRSF1B-201ENST00000376259 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
TNFRSF1B-201ENST00000376259 KDM5DQ9BY66 1539 aa17.8■□□□□ 0.44
TNFRSF1B-201ENST00000376259 SSFA2P28290 1259 aa17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 MCM10Q7L590 875 aa17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms