RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
PFDN6-202ENST00000374607 CADPS2Q86UW7 1296 aa21.57■■□□□ 1.04
PFDN6-202ENST00000374607 EIF3AQ14152 1382 aaKnown RBP21.57■■□□□ 1.04
PFDN6-202ENST00000374607 RALGAPBQ86X10 1494 aa21.57■■□□□ 1.04
PFDN6-202ENST00000374607 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
PFDN6-202ENST00000374607 PLEKHH1Q9ULM0 1364 aa21.56■■□□□ 1.04
PFDN6-202ENST00000374607 ADGRL3Q9HAR2 1447 aa21.55■■□□□ 1.04
PFDN6-202ENST00000374607 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
PFDN6-202ENST00000374607 CENPJQ9HC77 1338 aaPredicted RBP21.52■■□□□ 1.03
PFDN6-202ENST00000374607 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.52■■□□□ 1.03
PFDN6-202ENST00000374607 HIRIP3Q9BW71 556 aaPredicted RBP21.51■■□□□ 1.03
PFDN6-202ENST00000374607 NALCNQ8IZF0 1738 aa21.51■■□□□ 1.03
PFDN6-202ENST00000374607 ARHGEF28Q8N1W1 1705 aaKnown RBP21.51■■□□□ 1.03
PFDN6-202ENST00000374607 GPRASP1Q5JY77 1395 aa21.5■■□□□ 1.03
PFDN6-202ENST00000374607 SLAIN2Q9P270 581 aa21.5■■□□□ 1.03
PFDN6-202ENST00000374607 DCCP43146 1447 aa21.49■■□□□ 1.03
PFDN6-202ENST00000374607 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
PFDN6-202ENST00000374607 HSPA1LP34931 641 aa21.45■■□□□ 1.02
PFDN6-202ENST00000374607 CDC42BPGQ6DT37 1551 aa21.43■■□□□ 1.02
PFDN6-202ENST00000374607 WASLO00401 505 aaPredicted RBP21.42■■□□□ 1.02
PFDN6-202ENST00000374607 USP47Q96K76 1375 aa21.42■■□□□ 1.02
PFDN6-202ENST00000374607 QRICH2Q9H0J4 1663 aa21.42■■□□□ 1.02
PFDN6-202ENST00000374607 SRPK2P78362 688 aaKnown RBP21.41■■□□□ 1.02
PFDN6-202ENST00000374607 ESCO1Q5FWF5 840 aa21.41■■□□□ 1.02
PFDN6-202ENST00000374607 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
PFDN6-202ENST00000374607 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
PFDN6-202ENST00000374607 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
PFDN6-202ENST00000374607 MST1RQ04912 1400 aa21.39■■□□□ 1.02
PFDN6-202ENST00000374607 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
PFDN6-202ENST00000374607 ZEB1P37275 1124 aaPredicted RBP21.39■■□□□ 1.01
PFDN6-202ENST00000374607 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
PFDN6-202ENST00000374607 ADGRB2O60241 1585 aa21.38■■□□□ 1.01
PFDN6-202ENST00000374607 C1orf167Q5SNV9 1468 aa21.38■■□□□ 1.01
PFDN6-202ENST00000374607 FMN2Q9NZ56 1722 aa21.36■■□□□ 1.01
PFDN6-202ENST00000374607 ROBO1Q9Y6N7 1651 aa21.36■■□□□ 1.01
PFDN6-202ENST00000374607 BRINP3Q76B58 766 aa21.35■■□□□ 1.01
PFDN6-202ENST00000374607 ORAI2Q96SN7 254 aa21.35■■□□□ 1.01
PFDN6-202ENST00000374607 DISP3Q9P2K9 1392 aa21.35■■□□□ 1.01
PFDN6-202ENST00000374607 CABP2Q9NPB3 220 aa21.34■■□□□ 1.01
PFDN6-202ENST00000374607 NUDT16Q96DE0 195 aaKnown RBP21.33■■□□□ 1.01
PFDN6-202ENST00000374607 ANKARQ7Z5J8 1434 aa21.32■■□□□ 1
PFDN6-202ENST00000374607 TMF1P82094 1093 aa21.32■■□□□ 1
PFDN6-202ENST00000374607 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
PFDN6-202ENST00000374607 PHF8Q9UPP1 1060 aa21.31■■□□□ 1
PFDN6-202ENST00000374607 SBNO2Q9Y2G9 1366 aa21.31■■□□□ 1
PFDN6-202ENST00000374607 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
PFDN6-202ENST00000374607 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
PFDN6-202ENST00000374607 NGDNQ8NEJ9 315 aaKnown RBP21.28■■□□□ 1
PFDN6-202ENST00000374607 CCDC61Q9Y6R9 512 aa21.28■■□□□ 1
PFDN6-202ENST00000374607 FOXO3O43524 673 aa21.27■■□□□ 1
PFDN6-202ENST00000374607 PSME1Q06323 249 aa21.27■■□□□ 1
PFDN6-202ENST00000374607 CDCA8Q53HL2 280 aa21.27■■□□□ 1
PFDN6-202ENST00000374607 RGPD8O14715 1765 aaPredicted RBP21.27■■□□□ 1
PFDN6-202ENST00000374607 NPHP3Q7Z494 1330 aa21.27■□□□□ 0.99
PFDN6-202ENST00000374607 PRR36Q9H6K5 1346 aa21.27■□□□□ 0.99
PFDN6-202ENST00000374607 TESK2Q96S53 571 aa21.26■□□□□ 0.99
PFDN6-202ENST00000374607 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
PFDN6-202ENST00000374607 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
PFDN6-202ENST00000374607 PHLPP1O60346 1717 aa21.25■□□□□ 0.99
PFDN6-202ENST00000374607 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
PFDN6-202ENST00000374607 TMC1Q8TDI8 760 aa21.25■□□□□ 0.99
PFDN6-202ENST00000374607 DDX17Q92841 729 aaKnown RBP21.25■□□□□ 0.99
PFDN6-202ENST00000374607 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
PFDN6-202ENST00000374607 USP32Q8NFA0 1604 aa21.24■□□□□ 0.99
PFDN6-202ENST00000374607 ATP7BP35670 1465 aa21.24■□□□□ 0.99
PFDN6-202ENST00000374607 PPIP5K1Q6PFW1 1433 aa21.23■□□□□ 0.99
PFDN6-202ENST00000374607 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
PFDN6-202ENST00000374607 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
PFDN6-202ENST00000374607 KRT28Q7Z3Y7 464 aa21.21■□□□□ 0.99
PFDN6-202ENST00000374607 AHDC1Q5TGY3 1603 aaPredicted RBP21.2■□□□□ 0.98
PFDN6-202ENST00000374607 LRRC59Q96AG4 307 aaKnown RBP21.2■□□□□ 0.98
PFDN6-202ENST00000374607 MED1Q15648 1581 aaPredicted RBP21.19■□□□□ 0.98
PFDN6-202ENST00000374607 PUS7Q96PZ0 661 aaKnown RBP21.19■□□□□ 0.98
PFDN6-202ENST00000374607 ACEP12821 1306 aa21.19■□□□□ 0.98
PFDN6-202ENST00000374607 NHSL1Q5SYE7 1610 aa21.18■□□□□ 0.98
PFDN6-202ENST00000374607 PLEKHG3A1L390 1219 aa21.18■□□□□ 0.98
PFDN6-202ENST00000374607 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
PFDN6-202ENST00000374607 LMOD2Q6P5Q4 547 aa21.18■□□□□ 0.98
PFDN6-202ENST00000374607 HDGFL2Q7Z4V5 671 aaPredicted RBP21.16■□□□□ 0.98
PFDN6-202ENST00000374607 TOPAZ1Q8N9V7 1692 aa21.15■□□□□ 0.98
PFDN6-202ENST00000374607 SOS2Q07890 1332 aaPredicted RBP21.15■□□□□ 0.98
PFDN6-202ENST00000374607 ILDR2Q71H61 639 aa21.14■□□□□ 0.97
PFDN6-202ENST00000374607 TERF2IPQ9NYB0 399 aa21.14■□□□□ 0.97
PFDN6-202ENST00000374607 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
PFDN6-202ENST00000374607 SLC12A5Q9H2X9 1139 aa21.13■□□□□ 0.97
PFDN6-202ENST00000374607 JCADQ9P266 1359 aa21.12■□□□□ 0.97
PFDN6-202ENST00000374607 COL16A1Q07092 1604 aaPredicted RBP21.12■□□□□ 0.97
PFDN6-202ENST00000374607 POLR3AO14802 1390 aaPredicted RBP21.11■□□□□ 0.97
PFDN6-202ENST00000374607 NINLQ9Y2I6 1382 aa21.11■□□□□ 0.97
PFDN6-202ENST00000374607 PLEKHG5O94827 1062 aa21.11■□□□□ 0.97
PFDN6-202ENST00000374607 PXDNQ92626 1479 aa21.11■□□□□ 0.97
PFDN6-202ENST00000374607 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
PFDN6-202ENST00000374607 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
PFDN6-202ENST00000374607 SBNO1A3KN83 1393 aa21.09■□□□□ 0.97
PFDN6-202ENST00000374607 SPATA31A3Q5VYP0 1347 aa21.08■□□□□ 0.97
PFDN6-202ENST00000374607 TNS3Q68CZ2 1445 aa21.07■□□□□ 0.96
PFDN6-202ENST00000374607 NUTM2BA6NNL0 878 aaPredicted RBP21.07■□□□□ 0.96
PFDN6-202ENST00000374607 NUTM2EB1AL46 878 aaPredicted RBP21.07■□□□□ 0.96
PFDN6-202ENST00000374607 NUTM2AQ8IVF1 878 aaPredicted RBP21.07■□□□□ 0.96
PFDN6-202ENST00000374607 ABTB2Q8N961 1025 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms