RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
KDM4A-201ENST00000372396 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
KDM4A-201ENST00000372396 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
KDM4A-201ENST00000372396 CDC42BPBQ9Y5S2 1711 aa12.72□□□□□ -0.37
KDM4A-201ENST00000372396 RTF1Q92541 710 aaKnown RBP12.72□□□□□ -0.37
KDM4A-201ENST00000372396 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
KDM4A-201ENST00000372396 GPRASP1Q5JY77 1395 aa12.72□□□□□ -0.37
KDM4A-201ENST00000372396 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
KDM4A-201ENST00000372396 RRP1P56182 461 aaKnown RBP12.71□□□□□ -0.38
KDM4A-201ENST00000372396 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.38
KDM4A-201ENST00000372396 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.38
KDM4A-201ENST00000372396 RGS3P49796 1198 aa12.7□□□□□ -0.38
KDM4A-201ENST00000372396 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
KDM4A-201ENST00000372396 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
KDM4A-201ENST00000372396 MTHFSP49914 203 aa12.69□□□□□ -0.38
KDM4A-201ENST00000372396 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
KDM4A-201ENST00000372396 AMPHP49418 695 aa12.69□□□□□ -0.38
KDM4A-201ENST00000372396 ABCA9Q8IUA7 1624 aa12.69□□□□□ -0.38
KDM4A-201ENST00000372396 TESK2Q96S53 571 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 TNRQ92752 1358 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 NINLQ9Y2I6 1382 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 UNC13BO14795 1591 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 TRPM2O94759 1503 aa12.68□□□□□ -0.38
KDM4A-201ENST00000372396 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
KDM4A-201ENST00000372396 HECW2Q9P2P5 1572 aa12.67□□□□□ -0.38
KDM4A-201ENST00000372396 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
KDM4A-201ENST00000372396 SPATA31E1Q6ZUB1 1445 aa12.67□□□□□ -0.38
KDM4A-201ENST00000372396 SMG6Q86US8 1419 aaKnown RBP12.67□□□□□ -0.38
KDM4A-201ENST00000372396 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
KDM4A-201ENST00000372396 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
KDM4A-201ENST00000372396 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
KDM4A-201ENST00000372396 CABP1Q9NZU7 370 aa12.66□□□□□ -0.38
KDM4A-201ENST00000372396 TPM2P07951 284 aa12.66□□□□□ -0.38
KDM4A-201ENST00000372396 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
KDM4A-201ENST00000372396 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
KDM4A-201ENST00000372396 ANP32BQ92688 251 aaKnown RBP12.65□□□□□ -0.38
KDM4A-201ENST00000372396 PTPRTO14522 1441 aa12.65□□□□□ -0.38
KDM4A-201ENST00000372396 NSD2O96028 1365 aa12.65□□□□□ -0.38
KDM4A-201ENST00000372396 NPATQ14207 1427 aa12.64□□□□□ -0.39
KDM4A-201ENST00000372396 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
KDM4A-201ENST00000372396 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
KDM4A-201ENST00000372396 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
KDM4A-201ENST00000372396 TET3O43151 1660 aa12.63□□□□□ -0.39
KDM4A-201ENST00000372396 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
KDM4A-201ENST00000372396 PARD3Q8TEW0 1356 aa12.63□□□□□ -0.39
KDM4A-201ENST00000372396 ARID3AQ99856 593 aa12.62□□□□□ -0.39
KDM4A-201ENST00000372396 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
KDM4A-201ENST00000372396 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
KDM4A-201ENST00000372396 MAP7D2Q96T17 732 aa12.62□□□□□ -0.39
KDM4A-201ENST00000372396 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 PDE4AP27815 886 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 PMFBP1Q8TBY8 1022 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 SLC26A8Q96RN1 970 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 RWDD1Q9H446 243 aaPredicted RBP12.61□□□□□ -0.39
KDM4A-201ENST00000372396 PLA2R1Q13018 1463 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 GOLGA6L3A6NEY3 463 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 RIPK4P57078 832 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
KDM4A-201ENST00000372396 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
KDM4A-201ENST00000372396 KDM5CP41229 1560 aa12.6□□□□□ -0.39
KDM4A-201ENST00000372396 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
KDM4A-201ENST00000372396 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
KDM4A-201ENST00000372396 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
KDM4A-201ENST00000372396 MYOM2P54296 1465 aa12.59□□□□□ -0.39
KDM4A-201ENST00000372396 EXOC6Q8TAG9 804 aa12.59□□□□□ -0.39
KDM4A-201ENST00000372396 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
KDM4A-201ENST00000372396 PSME1Q06323 249 aa12.59□□□□□ -0.39
KDM4A-201ENST00000372396 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.39
KDM4A-201ENST00000372396 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
KDM4A-201ENST00000372396 ZKSCAN2Q63HK3 967 aa12.58□□□□□ -0.4
KDM4A-201ENST00000372396 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
KDM4A-201ENST00000372396 PLIN1O60240 522 aa12.57□□□□□ -0.4
KDM4A-201ENST00000372396 CEBPAP49715 358 aaPredicted RBP12.57□□□□□ -0.4
KDM4A-201ENST00000372396 CRBNQ96SW2 442 aa12.57□□□□□ -0.4
KDM4A-201ENST00000372396 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
KDM4A-201ENST00000372396 SLC4A3P48751 1232 aa12.57□□□□□ -0.4
KDM4A-201ENST00000372396 RRAGDQ9NQL2 400 aaPredicted RBP12.57□□□□□ -0.4
KDM4A-201ENST00000372396 BECN1Q14457 450 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
KDM4A-201ENST00000372396 FAM13BQ9NYF5 915 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
KDM4A-201ENST00000372396 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 GNAI1P63096 354 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
KDM4A-201ENST00000372396 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
KDM4A-201ENST00000372396 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
KDM4A-201ENST00000372396 NLRP6P59044 892 aa12.55□□□□□ -0.4
KDM4A-201ENST00000372396 ABCC3O15438 1527 aa12.55□□□□□ -0.4
KDM4A-201ENST00000372396 CLCN1P35523 988 aa12.55□□□□□ -0.4
KDM4A-201ENST00000372396 ZHX1Q9UKY1 873 aaPredicted RBP12.55□□□□□ -0.4
KDM4A-201ENST00000372396 PRDM15P57071 1507 aaPredicted RBP12.55□□□□□ -0.4
KDM4A-201ENST00000372396 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
KDM4A-201ENST00000372396 INO80Q9ULG1 1556 aaPredicted RBP12.54□□□□□ -0.4
KDM4A-201ENST00000372396 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
KDM4A-201ENST00000372396 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
KDM4A-201ENST00000372396 CLUAP1Q96AJ1 413 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms