RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
TRIM4-203ENST00000355947 CCDC141Q6ZP82 1450 aa17.06■□□□□ 0.32
TRIM4-203ENST00000355947 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
TRIM4-203ENST00000355947 ITSN2Q9NZM3 1697 aa17.06■□□□□ 0.32
TRIM4-203ENST00000355947 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
TRIM4-203ENST00000355947 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
TRIM4-203ENST00000355947 GAS2L3Q86XJ1 694 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 SSH1Q8WYL5 1049 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 SPAG9O60271 1321 aaKnown RBP17.05■□□□□ 0.32
TRIM4-203ENST00000355947 ERBB4Q15303 1308 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 NUP160Q12769 1436 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 TRIM27P14373 513 aa17.05■□□□□ 0.32
TRIM4-203ENST00000355947 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
TRIM4-203ENST00000355947 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
TRIM4-203ENST00000355947 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
TRIM4-203ENST00000355947 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
TRIM4-203ENST00000355947 CLCN1P35523 988 aa17.03■□□□□ 0.32
TRIM4-203ENST00000355947 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
TRIM4-203ENST00000355947 ASXL1Q8IXJ9 1541 aa17.03■□□□□ 0.32
TRIM4-203ENST00000355947 SSFA2P28290 1259 aa17.03■□□□□ 0.32
TRIM4-203ENST00000355947 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
TRIM4-203ENST00000355947 FBLN1P23142 703 aa17.02■□□□□ 0.32
TRIM4-203ENST00000355947 MSNP26038 577 aaKnown RBP17.02■□□□□ 0.32
TRIM4-203ENST00000355947 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.32
TRIM4-203ENST00000355947 GGT6Q6P531 493 aa17.02■□□□□ 0.32
TRIM4-203ENST00000355947 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.32
TRIM4-203ENST00000355947 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.31
TRIM4-203ENST00000355947 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
TRIM4-203ENST00000355947 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
TRIM4-203ENST00000355947 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
TRIM4-203ENST00000355947 MCTP1Q6DN14 999 aa17■□□□□ 0.31
TRIM4-203ENST00000355947 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
TRIM4-203ENST00000355947 RIPK4P57078 832 aa17■□□□□ 0.31
TRIM4-203ENST00000355947 E9PCH4 1651 aa16.99■□□□□ 0.31
TRIM4-203ENST00000355947 NASPP49321 788 aaPredicted RBP16.99■□□□□ 0.31
TRIM4-203ENST00000355947 CAVIN1Q6NZI2 390 aaKnown RBP16.99■□□□□ 0.31
TRIM4-203ENST00000355947 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
TRIM4-203ENST00000355947 DDX19BQ9UMR2 479 aa16.98■□□□□ 0.31
TRIM4-203ENST00000355947 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
TRIM4-203ENST00000355947 CHAMP1Q96JM3 812 aa16.98■□□□□ 0.31
TRIM4-203ENST00000355947 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
TRIM4-203ENST00000355947 ATF7IPQ6VMQ6 1270 aa16.97■□□□□ 0.31
TRIM4-203ENST00000355947 RNF214Q8ND24 703 aa16.97■□□□□ 0.31
TRIM4-203ENST00000355947 INSRP06213 1382 aa16.96■□□□□ 0.31
TRIM4-203ENST00000355947 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
TRIM4-203ENST00000355947 HMOX1P09601 288 aa16.96■□□□□ 0.31
TRIM4-203ENST00000355947 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
TRIM4-203ENST00000355947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRIM4-203ENST00000355947 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
TRIM4-203ENST00000355947 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
TRIM4-203ENST00000355947 PRDM15P57071 1507 aaPredicted RBP16.94■□□□□ 0.3
TRIM4-203ENST00000355947 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
TRIM4-203ENST00000355947 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
TRIM4-203ENST00000355947 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
TRIM4-203ENST00000355947 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
TRIM4-203ENST00000355947 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
TRIM4-203ENST00000355947 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
TRIM4-203ENST00000355947 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
TRIM4-203ENST00000355947 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
TRIM4-203ENST00000355947 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
TRIM4-203ENST00000355947 RRP9O43818 475 aaKnown RBP16.92■□□□□ 0.3
TRIM4-203ENST00000355947 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
TRIM4-203ENST00000355947 SHANK2Q9UPX8 1470 aa16.92■□□□□ 0.3
TRIM4-203ENST00000355947 MINK1Q8N4C8 1332 aaPredicted RBP16.91■□□□□ 0.3
TRIM4-203ENST00000355947 ADCY10Q96PN6 1610 aa16.91■□□□□ 0.3
TRIM4-203ENST00000355947 IPO8O15397 1037 aaKnown RBP16.91■□□□□ 0.3
TRIM4-203ENST00000355947 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
TRIM4-203ENST00000355947 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
TRIM4-203ENST00000355947 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.3
TRIM4-203ENST00000355947 KANK1Q14678 1352 aa16.89■□□□□ 0.29
TRIM4-203ENST00000355947 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
TRIM4-203ENST00000355947 SOX12O15370 315 aa16.89■□□□□ 0.29
TRIM4-203ENST00000355947 TBC1D9Q6ZT07 1266 aa16.89■□□□□ 0.29
TRIM4-203ENST00000355947 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
TRIM4-203ENST00000355947 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
TRIM4-203ENST00000355947 K7ELQ4 463 aaPredicted RBP16.88■□□□□ 0.29
TRIM4-203ENST00000355947 NGEFQ8N5V2 710 aa16.88■□□□□ 0.29
TRIM4-203ENST00000355947 PKP1Q13835 747 aa16.88■□□□□ 0.29
TRIM4-203ENST00000355947 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
TRIM4-203ENST00000355947 ABCA8O94911 1581 aa16.87■□□□□ 0.29
TRIM4-203ENST00000355947 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
TRIM4-203ENST00000355947 SAMD9LQ8IVG5 1584 aa16.86■□□□□ 0.29
TRIM4-203ENST00000355947 C16orf71Q8IYS4 520 aaPredicted RBP16.86■□□□□ 0.29
TRIM4-203ENST00000355947 TRAPPC8Q9Y2L5 1435 aa16.85■□□□□ 0.29
TRIM4-203ENST00000355947 SKOR2Q2VWA4 1001 aaPredicted RBP16.85■□□□□ 0.29
TRIM4-203ENST00000355947 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
TRIM4-203ENST00000355947 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
TRIM4-203ENST00000355947 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
TRIM4-203ENST00000355947 POLR3AO14802 1390 aaPredicted RBP16.84■□□□□ 0.29
TRIM4-203ENST00000355947 RAB3GAP1Q15042 981 aa16.83■□□□□ 0.28
TRIM4-203ENST00000355947 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
TRIM4-203ENST00000355947 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
TRIM4-203ENST00000355947 DTNBO60941 627 aa16.83■□□□□ 0.28
TRIM4-203ENST00000355947 ZSCAN30Q86W11 494 aa16.83■□□□□ 0.28
TRIM4-203ENST00000355947 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
TRIM4-203ENST00000355947 TSPYL6Q8N831 410 aa16.83■□□□□ 0.28
TRIM4-203ENST00000355947 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
TRIM4-203ENST00000355947 NUCB1Q02818 461 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms