RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
TPM4-202ENST00000344824 ADGRB1O14514 1584 aa19.89■□□□□ 0.77
TPM4-202ENST00000344824 ABCC11Q96J66 1382 aa19.89■□□□□ 0.77
TPM4-202ENST00000344824 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
TPM4-202ENST00000344824 FMN2Q9NZ56 1722 aa19.87■□□□□ 0.77
TPM4-202ENST00000344824 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
TPM4-202ENST00000344824 BRINP3Q76B58 766 aa19.87■□□□□ 0.77
TPM4-202ENST00000344824 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
TPM4-202ENST00000344824 ARHGEF28Q8N1W1 1705 aaKnown RBP19.87■□□□□ 0.77
TPM4-202ENST00000344824 KIAA1210Q9ULL0 1709 aa19.87■□□□□ 0.77
TPM4-202ENST00000344824 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
TPM4-202ENST00000344824 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
TPM4-202ENST00000344824 RGPD8O14715 1765 aaPredicted RBP19.85■□□□□ 0.77
TPM4-202ENST00000344824 DLC1Q96QB1 1528 aa19.85■□□□□ 0.77
TPM4-202ENST00000344824 NUTM2FA1L443 756 aa19.84■□□□□ 0.77
TPM4-202ENST00000344824 STAC3Q96MF2 364 aa19.84■□□□□ 0.77
TPM4-202ENST00000344824 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
TPM4-202ENST00000344824 PRAM1Q96QH2 718 aa19.83■□□□□ 0.76
TPM4-202ENST00000344824 POGKQ9P215 609 aa19.83■□□□□ 0.76
TPM4-202ENST00000344824 SHPRHQ149N8 1683 aa19.83■□□□□ 0.76
TPM4-202ENST00000344824 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
TPM4-202ENST00000344824 JCADQ9P266 1359 aa19.8■□□□□ 0.76
TPM4-202ENST00000344824 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
TPM4-202ENST00000344824 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
TPM4-202ENST00000344824 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
TPM4-202ENST00000344824 ESCO1Q5FWF5 840 aa19.77■□□□□ 0.76
TPM4-202ENST00000344824 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
TPM4-202ENST00000344824 KIF1AQ12756 1690 aa19.77■□□□□ 0.76
TPM4-202ENST00000344824 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
TPM4-202ENST00000344824 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
TPM4-202ENST00000344824 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
TPM4-202ENST00000344824 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
TPM4-202ENST00000344824 TONSLQ96HA7 1378 aa19.73■□□□□ 0.75
TPM4-202ENST00000344824 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
TPM4-202ENST00000344824 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
TPM4-202ENST00000344824 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
TPM4-202ENST00000344824 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
TPM4-202ENST00000344824 LRP6O75581 1613 aa19.71■□□□□ 0.75
TPM4-202ENST00000344824 MEX3CQ5U5Q3 659 aaKnown RBP19.7■□□□□ 0.74
TPM4-202ENST00000344824 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
TPM4-202ENST00000344824 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
TPM4-202ENST00000344824 XPCQ01831 940 aaPredicted RBP19.69■□□□□ 0.74
TPM4-202ENST00000344824 ILDR2Q71H61 639 aa19.69■□□□□ 0.74
TPM4-202ENST00000344824 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
TPM4-202ENST00000344824 LRRC59Q96AG4 307 aaKnown RBP19.69■□□□□ 0.74
TPM4-202ENST00000344824 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
TPM4-202ENST00000344824 SPATA31A6Q5VVP1 1343 aa19.68■□□□□ 0.74
TPM4-202ENST00000344824 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
TPM4-202ENST00000344824 ROCK2O75116 1388 aaKnown RBP19.67■□□□□ 0.74
TPM4-202ENST00000344824 FOXO3O43524 673 aa19.67■□□□□ 0.74
TPM4-202ENST00000344824 PNPLA6Q8IY17 1366 aa19.66■□□□□ 0.74
TPM4-202ENST00000344824 PXDNQ92626 1479 aa19.66■□□□□ 0.74
TPM4-202ENST00000344824 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
TPM4-202ENST00000344824 ANKARQ7Z5J8 1434 aa19.65■□□□□ 0.74
TPM4-202ENST00000344824 SOS2Q07890 1332 aaPredicted RBP19.65■□□□□ 0.74
TPM4-202ENST00000344824 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.73
TPM4-202ENST00000344824 COL22A1Q8NFW1 1626 aaPredicted RBP19.63■□□□□ 0.73
TPM4-202ENST00000344824 WASLO00401 505 aaPredicted RBP19.62■□□□□ 0.73
TPM4-202ENST00000344824 PMFBP1Q8TBY8 1022 aa19.62■□□□□ 0.73
TPM4-202ENST00000344824 TOPAZ1Q8N9V7 1692 aa19.61■□□□□ 0.73
TPM4-202ENST00000344824 CENPJQ9HC77 1338 aaPredicted RBP19.61■□□□□ 0.73
TPM4-202ENST00000344824 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
TPM4-202ENST00000344824 MARF1Q9Y4F3 1742 aaKnown RBP19.6■□□□□ 0.73
TPM4-202ENST00000344824 ATP7BP35670 1465 aa19.6■□□□□ 0.73
TPM4-202ENST00000344824 PRR36Q9H6K5 1346 aa19.6■□□□□ 0.73
TPM4-202ENST00000344824 PLEKHG5O94827 1062 aa19.58■□□□□ 0.72
TPM4-202ENST00000344824 KRT28Q7Z3Y7 464 aa19.58■□□□□ 0.72
TPM4-202ENST00000344824 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
TPM4-202ENST00000344824 RALGAPBQ86X10 1494 aa19.58■□□□□ 0.72
TPM4-202ENST00000344824 TRPM3Q9HCF6 1732 aaPredicted RBP19.57■□□□□ 0.72
TPM4-202ENST00000344824 LMOD2Q6P5Q4 547 aa19.57■□□□□ 0.72
TPM4-202ENST00000344824 CDK19Q9BWU1 502 aa19.57■□□□□ 0.72
TPM4-202ENST00000344824 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
TPM4-202ENST00000344824 ABCA3Q99758 1704 aa19.56■□□□□ 0.72
TPM4-202ENST00000344824 ADAMTS2O95450 1211 aa19.56■□□□□ 0.72
TPM4-202ENST00000344824 PSME1Q06323 249 aa19.56■□□□□ 0.72
TPM4-202ENST00000344824 C8orf37Q96NL8 207 aa19.56■□□□□ 0.72
TPM4-202ENST00000344824 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
TPM4-202ENST00000344824 SRPK2P78362 688 aaKnown RBP19.55■□□□□ 0.72
TPM4-202ENST00000344824 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
TPM4-202ENST00000344824 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
TPM4-202ENST00000344824 NUDT16Q96DE0 195 aaKnown RBP19.54■□□□□ 0.72
TPM4-202ENST00000344824 GPRASP1Q5JY77 1395 aa19.54■□□□□ 0.72
TPM4-202ENST00000344824 SPATA31A3Q5VYP0 1347 aa19.53■□□□□ 0.72
TPM4-202ENST00000344824 POTEAQ6S8J7 498 aa19.52■□□□□ 0.72
TPM4-202ENST00000344824 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
TPM4-202ENST00000344824 AFF2P51816 1311 aa19.52■□□□□ 0.72
TPM4-202ENST00000344824 HAP1P54257 671 aaPredicted RBP19.51■□□□□ 0.71
TPM4-202ENST00000344824 CABP2Q9NPB3 220 aa19.51■□□□□ 0.71
TPM4-202ENST00000344824 SBNO1A3KN83 1393 aa19.49■□□□□ 0.71
TPM4-202ENST00000344824 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
TPM4-202ENST00000344824 ZNF772Q68DY9 489 aaPredicted RBP19.49■□□□□ 0.71
TPM4-202ENST00000344824 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
TPM4-202ENST00000344824 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
TPM4-202ENST00000344824 NGLY1Q96IV0 654 aa19.48■□□□□ 0.71
TPM4-202ENST00000344824 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
TPM4-202ENST00000344824 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
TPM4-202ENST00000344824 SOCS7O14512 581 aa19.45■□□□□ 0.7
TPM4-202ENST00000344824 CABLES1Q8TDN4 633 aa19.45■□□□□ 0.7
TPM4-202ENST00000344824 CCDC61Q9Y6R9 512 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms