RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
PRKCH-201ENST00000332981 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
PRKCH-201ENST00000332981 ANP32BQ92688 251 aaKnown RBP16.91■□□□□ 0.3
PRKCH-201ENST00000332981 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
PRKCH-201ENST00000332981 PLCB2Q00722 1185 aa16.9■□□□□ 0.3
PRKCH-201ENST00000332981 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
PRKCH-201ENST00000332981 TRIM27P14373 513 aa16.9■□□□□ 0.3
PRKCH-201ENST00000332981 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.3
PRKCH-201ENST00000332981 MCM4P33991 863 aa16.89■□□□□ 0.29
PRKCH-201ENST00000332981 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
PRKCH-201ENST00000332981 TARBP1Q13395 1621 aaKnown RBP16.87■□□□□ 0.29
PRKCH-201ENST00000332981 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
PRKCH-201ENST00000332981 XRCC6P12956 609 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRKCH-201ENST00000332981 RAPGEF3O95398 923 aa16.86■□□□□ 0.29
PRKCH-201ENST00000332981 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
PRKCH-201ENST00000332981 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
PRKCH-201ENST00000332981 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
PRKCH-201ENST00000332981 DTNBO60941 627 aa16.85■□□□□ 0.29
PRKCH-201ENST00000332981 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
PRKCH-201ENST00000332981 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
PRKCH-201ENST00000332981 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
PRKCH-201ENST00000332981 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
PRKCH-201ENST00000332981 RBM10P98175 930 aaKnown RBP16.84■□□□□ 0.29
PRKCH-201ENST00000332981 C14orf37Q86TY3 774 aa16.84■□□□□ 0.29
PRKCH-201ENST00000332981 TBC1D32Q96NH3 1257 aa16.84■□□□□ 0.29
PRKCH-201ENST00000332981 USP19O94966 1318 aa16.84■□□□□ 0.29
PRKCH-201ENST00000332981 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.29
PRKCH-201ENST00000332981 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
PRKCH-201ENST00000332981 DDX19BQ9UMR2 479 aa16.83■□□□□ 0.28
PRKCH-201ENST00000332981 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
PRKCH-201ENST00000332981 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.28
PRKCH-201ENST00000332981 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
PRKCH-201ENST00000332981 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
PRKCH-201ENST00000332981 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
PRKCH-201ENST00000332981 IPO8O15397 1037 aaKnown RBP16.82■□□□□ 0.28
PRKCH-201ENST00000332981 CHAMP1Q96JM3 812 aa16.82■□□□□ 0.28
PRKCH-201ENST00000332981 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
PRKCH-201ENST00000332981 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
PRKCH-201ENST00000332981 ZNF521Q96K83 1311 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 RNF214Q8ND24 703 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
PRKCH-201ENST00000332981 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
PRKCH-201ENST00000332981 SMARCA5O60264 1052 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-201ENST00000332981 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-201ENST00000332981 FAM43AQ8N2R8 423 aa16.79■□□□□ 0.28
PRKCH-201ENST00000332981 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
PRKCH-201ENST00000332981 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
PRKCH-201ENST00000332981 WAPLQ7Z5K2 1190 aa16.79■□□□□ 0.28
PRKCH-201ENST00000332981 HDGFL2Q7Z4V5 671 aaPredicted RBP16.78■□□□□ 0.28
PRKCH-201ENST00000332981 GBP4Q96PP9 640 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 FAM13BQ9NYF5 915 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
PRKCH-201ENST00000332981 SSFA2P28290 1259 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 TSPYL6Q8N831 410 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 NOS1P29475 1434 aa16.78■□□□□ 0.28
PRKCH-201ENST00000332981 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.28
PRKCH-201ENST00000332981 SCAF11Q99590 1463 aaKnown RBP16.77■□□□□ 0.27
PRKCH-201ENST00000332981 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
PRKCH-201ENST00000332981 ARHGEF12Q9NZN5 1544 aa16.76■□□□□ 0.27
PRKCH-201ENST00000332981 TNPO1Q92973 898 aaKnown RBP16.76■□□□□ 0.27
PRKCH-201ENST00000332981 DNTTIP2Q5QJE6 756 aaKnown RBP16.76■□□□□ 0.27
PRKCH-201ENST00000332981 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
PRKCH-201ENST00000332981 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
PRKCH-201ENST00000332981 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
PRKCH-201ENST00000332981 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
PRKCH-201ENST00000332981 WDR7Q9Y4E6 1490 aa16.75■□□□□ 0.27
PRKCH-201ENST00000332981 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
PRKCH-201ENST00000332981 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
PRKCH-201ENST00000332981 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
PRKCH-201ENST00000332981 CHD1LQ86WJ1 897 aa16.75■□□□□ 0.27
PRKCH-201ENST00000332981 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
PRKCH-201ENST00000332981 UGGT1Q9NYU2 1555 aa16.74■□□□□ 0.27
PRKCH-201ENST00000332981 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
PRKCH-201ENST00000332981 TRIM6-TRIM34B2RNG4 842 aa16.74■□□□□ 0.27
PRKCH-201ENST00000332981 WDR63Q8IWG1 891 aa16.74■□□□□ 0.27
PRKCH-201ENST00000332981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
PRKCH-201ENST00000332981 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
PRKCH-201ENST00000332981 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
PRKCH-201ENST00000332981 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
PRKCH-201ENST00000332981 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
PRKCH-201ENST00000332981 CD2BP2O95400 341 aaKnown RBP16.72■□□□□ 0.27
PRKCH-201ENST00000332981 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
PRKCH-201ENST00000332981 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
PRKCH-201ENST00000332981 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
PRKCH-201ENST00000332981 PHACTR3Q96KR7 559 aa16.72■□□□□ 0.27
PRKCH-201ENST00000332981 DDX11L8A8MPP1 907 aa16.71■□□□□ 0.27
PRKCH-201ENST00000332981 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
PRKCH-201ENST00000332981 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
PRKCH-201ENST00000332981 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
PRKCH-201ENST00000332981 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
PRKCH-201ENST00000332981 PRPF40AO75400 957 aaKnown RBP16.7■□□□□ 0.26
PRKCH-201ENST00000332981 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
PRKCH-201ENST00000332981 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms