RNA–Protein interactions for RNA: ENST00000326674.9

PTPMT1-202, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPMT1, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-202ENST00000326674 PLEKHH1Q9ULM0 1364 aa29.16■■■□□ 2.26
PTPMT1-202ENST00000326674 SOCS7O14512 581 aa29.16■■■□□ 2.26
PTPMT1-202ENST00000326674 SPATA31A6Q5VVP1 1343 aa29.16■■■□□ 2.26
PTPMT1-202ENST00000326674 DDX17Q92841 729 aaKnown RBP29.15■■■□□ 2.26
PTPMT1-202ENST00000326674 MEX3CQ5U5Q3 659 aaKnown RBP29.14■■■□□ 2.26
PTPMT1-202ENST00000326674 ORAI2Q96SN7 254 aa29.14■■■□□ 2.26
PTPMT1-202ENST00000326674 FMN2Q9NZ56 1722 aa29.13■■■□□ 2.25
PTPMT1-202ENST00000326674 LRRC59Q96AG4 307 aaKnown RBP29.11■■■□□ 2.25
PTPMT1-202ENST00000326674 STAC3Q96MF2 364 aa29.11■■■□□ 2.25
PTPMT1-202ENST00000326674 NUTM2FA1L443 756 aa29.1■■■□□ 2.25
PTPMT1-202ENST00000326674 LRP6O75581 1613 aa29.09■■■□□ 2.25
PTPMT1-202ENST00000326674 ESCO1Q5FWF5 840 aa29.09■■■□□ 2.25
PTPMT1-202ENST00000326674 ADGRB1O14514 1584 aa29.09■■■□□ 2.25
PTPMT1-202ENST00000326674 NUTM2BA6NNL0 878 aaPredicted RBP29.08■■■□□ 2.25
PTPMT1-202ENST00000326674 NUTM2EB1AL46 878 aaPredicted RBP29.08■■■□□ 2.25
PTPMT1-202ENST00000326674 SAFB2Q14151 953 aaKnown RBP eCLIP29.08■■■□□ 2.25
PTPMT1-202ENST00000326674 NUTM2AQ8IVF1 878 aaPredicted RBP29.08■■■□□ 2.25
PTPMT1-202ENST00000326674 SIRT1Q96EB6 747 aa29.08■■■□□ 2.25
PTPMT1-202ENST00000326674 DLC1Q96QB1 1528 aa29.08■■■□□ 2.25
PTPMT1-202ENST00000326674 POGKQ9P215 609 aa29.07■■■□□ 2.24
PTPMT1-202ENST00000326674 RGS17Q9UGC6 210 aaPredicted RBP29.07■■■□□ 2.24
PTPMT1-202ENST00000326674 PRAM1Q96QH2 718 aa29.06■■■□□ 2.24
PTPMT1-202ENST00000326674 TRAK1Q9UPV9 953 aa29.05■■■□□ 2.24
PTPMT1-202ENST00000326674 RGPD8O14715 1765 aaPredicted RBP29.05■■■□□ 2.24
PTPMT1-202ENST00000326674 KIF1AQ12756 1690 aa29.02■■■□□ 2.24
PTPMT1-202ENST00000326674 PNPLA6Q8IY17 1366 aa29.02■■■□□ 2.24
PTPMT1-202ENST00000326674 NPHP3Q7Z494 1330 aa29.01■■■□□ 2.23
PTPMT1-202ENST00000326674 KIAA1210Q9ULL0 1709 aa29■■■□□ 2.23
PTPMT1-202ENST00000326674 SOS2Q07890 1332 aaPredicted RBP28.99■■■□□ 2.23
PTPMT1-202ENST00000326674 ARHGEF28Q8N1W1 1705 aaKnown RBP28.99■■■□□ 2.23
PTPMT1-202ENST00000326674 POTEAQ6S8J7 498 aa28.97■■■□□ 2.23
PTPMT1-202ENST00000326674 ADGRB2O60241 1585 aa28.96■■■□□ 2.23
PTPMT1-202ENST00000326674 FOXO3O43524 673 aa28.96■■■□□ 2.23
PTPMT1-202ENST00000326674 XPCQ01831 940 aaPredicted RBP28.94■■■□□ 2.22
PTPMT1-202ENST00000326674 MINK1Q8N4C8 1332 aaPredicted RBP28.94■■■□□ 2.22
PTPMT1-202ENST00000326674 PXDNQ92626 1479 aa28.93■■■□□ 2.22
PTPMT1-202ENST00000326674 ZNF772Q68DY9 489 aaPredicted RBP28.92■■■□□ 2.22
PTPMT1-202ENST00000326674 HIRIP3Q9BW71 556 aaPredicted RBP28.92■■■□□ 2.22
PTPMT1-202ENST00000326674 COL22A1Q8NFW1 1626 aaPredicted RBP28.91■■■□□ 2.22
PTPMT1-202ENST00000326674 NEUROD1Q13562 356 aa28.9■■■□□ 2.22
PTPMT1-202ENST00000326674 TRIM26Q12899 539 aaPredicted RBP28.89■■■□□ 2.22
PTPMT1-202ENST00000326674 SIN3AQ96ST3 1273 aa28.89■■■□□ 2.22
PTPMT1-202ENST00000326674 USP32Q8NFA0 1604 aa28.89■■■□□ 2.22
PTPMT1-202ENST00000326674 C8orf37Q96NL8 207 aa28.88■■■□□ 2.21
PTPMT1-202ENST00000326674 PHF8Q9UPP1 1060 aa28.88■■■□□ 2.21
PTPMT1-202ENST00000326674 ADAMTS2O95450 1211 aa28.87■■■□□ 2.21
PTPMT1-202ENST00000326674 EIF3AQ14152 1382 aaKnown RBP28.87■■■□□ 2.21
PTPMT1-202ENST00000326674 ANKARQ7Z5J8 1434 aa28.86■■■□□ 2.21
PTPMT1-202ENST00000326674 AFF2P51816 1311 aa28.86■■■□□ 2.21
PTPMT1-202ENST00000326674 TULP4Q9NRJ4 1543 aa28.84■■■□□ 2.21
PTPMT1-202ENST00000326674 KRT28Q7Z3Y7 464 aa28.83■■■□□ 2.21
PTPMT1-202ENST00000326674 L3MBTL2Q969R5 705 aa28.83■■■□□ 2.21
PTPMT1-202ENST00000326674 ITSN1Q15811 1721 aa28.83■■■□□ 2.21
PTPMT1-202ENST00000326674 MARF1Q9Y4F3 1742 aaKnown RBP28.83■■■□□ 2.21
PTPMT1-202ENST00000326674 WASLO00401 505 aaPredicted RBP28.81■■■□□ 2.2
PTPMT1-202ENST00000326674 PMFBP1Q8TBY8 1022 aa28.81■■■□□ 2.2
PTPMT1-202ENST00000326674 NGLY1Q96IV0 654 aa28.81■■■□□ 2.2
PTPMT1-202ENST00000326674 PSME1Q06323 249 aa28.8■■■□□ 2.2
PTPMT1-202ENST00000326674 NBPF1Q3BBV0 1214 aa28.8■■■□□ 2.2
PTPMT1-202ENST00000326674 TRPM1Q7Z4N2 1603 aa28.78■■■□□ 2.2
PTPMT1-202ENST00000326674 SPATA31A3Q5VYP0 1347 aa28.77■■■□□ 2.2
PTPMT1-202ENST00000326674 TNS3Q68CZ2 1445 aa28.76■■■□□ 2.19
PTPMT1-202ENST00000326674 QRICH2Q9H0J4 1663 aa28.75■■■□□ 2.19
PTPMT1-202ENST00000326674 LMOD2Q6P5Q4 547 aa28.75■■■□□ 2.19
PTPMT1-202ENST00000326674 RXRBP28702 533 aa28.74■■■□□ 2.19
PTPMT1-202ENST00000326674 PRR36Q9H6K5 1346 aa28.73■■■□□ 2.19
PTPMT1-202ENST00000326674 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
PTPMT1-202ENST00000326674 PLEKHG5O94827 1062 aa28.72■■■□□ 2.19
PTPMT1-202ENST00000326674 GPRASP1Q5JY77 1395 aa28.72■■■□□ 2.19
PTPMT1-202ENST00000326674 TRPM3Q9HCF6 1732 aaPredicted RBP28.7■■■□□ 2.19
PTPMT1-202ENST00000326674 SBNO1A3KN83 1393 aa28.7■■■□□ 2.18
PTPMT1-202ENST00000326674 ATP7BP35670 1465 aa28.7■■■□□ 2.18
PTPMT1-202ENST00000326674 CENPJQ9HC77 1338 aaPredicted RBP28.69■■■□□ 2.18
PTPMT1-202ENST00000326674 NGDNQ8NEJ9 315 aaKnown RBP28.69■■■□□ 2.18
PTPMT1-202ENST00000326674 CDK19Q9BWU1 502 aa28.69■■■□□ 2.18
PTPMT1-202ENST00000326674 QTRT2Q9H974 415 aaKnown RBP28.69■■■□□ 2.18
PTPMT1-202ENST00000326674 USP21Q9UK80 565 aa28.69■■■□□ 2.18
PTPMT1-202ENST00000326674 ABCA3Q99758 1704 aa28.69■■■□□ 2.18
PTPMT1-202ENST00000326674 ARHGEF10O15013 1369 aa28.68■■■□□ 2.18
PTPMT1-202ENST00000326674 TOPAZ1Q8N9V7 1692 aa28.67■■■□□ 2.18
PTPMT1-202ENST00000326674 ROCK2O75116 1388 aaKnown RBP28.67■■■□□ 2.18
PTPMT1-202ENST00000326674 TONSLQ96HA7 1378 aa28.67■■■□□ 2.18
PTPMT1-202ENST00000326674 NUDT16Q96DE0 195 aaKnown RBP28.67■■■□□ 2.18
PTPMT1-202ENST00000326674 ALS2Q96Q42 1657 aa28.64■■■□□ 2.18
PTPMT1-202ENST00000326674 RBM6P78332 1123 aaKnown RBP28.63■■■□□ 2.17
PTPMT1-202ENST00000326674 CDK12Q9NYV4 1490 aaPredicted RBP28.63■■■□□ 2.17
PTPMT1-202ENST00000326674 PAK3O75914 559 aaPredicted RBP28.62■■■□□ 2.17
PTPMT1-202ENST00000326674 SRPK2P78362 688 aaKnown RBP28.62■■■□□ 2.17
PTPMT1-202ENST00000326674 CABLES1Q8TDN4 633 aa28.62■■■□□ 2.17
PTPMT1-202ENST00000326674 FNBP4Q8N3X1 1017 aaPredicted RBP28.61■■■□□ 2.17
PTPMT1-202ENST00000326674 TRPC5Q9UL62 973 aaPredicted RBP28.61■■■□□ 2.17
PTPMT1-202ENST00000326674 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.6■■■□□ 2.17
PTPMT1-202ENST00000326674 PLCH1Q4KWH8 1693 aa28.58■■■□□ 2.17
PTPMT1-202ENST00000326674 CCDC61Q9Y6R9 512 aa28.57■■■□□ 2.16
PTPMT1-202ENST00000326674 RGS12O14924 1447 aa28.56■■■□□ 2.16
PTPMT1-202ENST00000326674 NBPF8Q3BBV2 869 aa28.56■■■□□ 2.16
PTPMT1-202ENST00000326674 ATRNO75882 1429 aa28.55■■■□□ 2.16
PTPMT1-202ENST00000326674 CABP2Q9NPB3 220 aa28.54■■■□□ 2.16
PTPMT1-202ENST00000326674 BCL9LQ86UU0 1499 aa28.53■■■□□ 2.16
PTPMT1-202ENST00000326674 PPIP5K1Q6PFW1 1433 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms