RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 EVC2Q86UK5 1308 aa19.67■□□□□ 0.74
CHFR-202ENST00000315585 ALKQ9UM73 1620 aa19.66■□□□□ 0.74
CHFR-202ENST00000315585 ADAMTS8Q9UP79 889 aa19.65■□□□□ 0.74
CHFR-202ENST00000315585 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
CHFR-202ENST00000315585 SENP3-EIF4A1A0A087X0R7 540 aa19.63■□□□□ 0.73
CHFR-202ENST00000315585 NLRP1Q9C000 1473 aa19.61■□□□□ 0.73
CHFR-202ENST00000315585 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
CHFR-202ENST00000315585 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
CHFR-202ENST00000315585 MSH5O43196 834 aa19.6■□□□□ 0.73
CHFR-202ENST00000315585 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.6■□□□□ 0.73
CHFR-202ENST00000315585 STK26Q9P289 416 aa19.6■□□□□ 0.73
CHFR-202ENST00000315585 EXOC6Q8TAG9 804 aa19.59■□□□□ 0.73
CHFR-202ENST00000315585 POGKQ9P215 609 aa19.59■□□□□ 0.73
CHFR-202ENST00000315585 NINLQ9Y2I6 1382 aa19.59■□□□□ 0.73
CHFR-202ENST00000315585 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
CHFR-202ENST00000315585 PTPRMP28827 1452 aa19.58■□□□□ 0.73
CHFR-202ENST00000315585 DLC1Q96QB1 1528 aa19.58■□□□□ 0.73
CHFR-202ENST00000315585 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
CHFR-202ENST00000315585 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
CHFR-202ENST00000315585 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
CHFR-202ENST00000315585 FER1L4A9Z1Z3 1794 aa19.56■□□□□ 0.72
CHFR-202ENST00000315585 MS4A1P11836 297 aa19.56■□□□□ 0.72
CHFR-202ENST00000315585 TMEM2Q9UHN6 1383 aa19.56■□□□□ 0.72
CHFR-202ENST00000315585 PRAM1Q96QH2 718 aa19.55■□□□□ 0.72
CHFR-202ENST00000315585 ATAD2Q6PL18 1390 aa19.54■□□□□ 0.72
CHFR-202ENST00000315585 ABCC11Q96J66 1382 aa19.54■□□□□ 0.72
CHFR-202ENST00000315585 ZNF521Q96K83 1311 aa19.53■□□□□ 0.72
CHFR-202ENST00000315585 SETD1AO15047 1707 aaKnown RBP19.53■□□□□ 0.72
CHFR-202ENST00000315585 C3P01024 1663 aa19.53■□□□□ 0.72
CHFR-202ENST00000315585 CARD14Q9BXL6 1004 aa19.53■□□□□ 0.72
CHFR-202ENST00000315585 USP32Q8NFA0 1604 aa19.52■□□□□ 0.71
CHFR-202ENST00000315585 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.71
CHFR-202ENST00000315585 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.71
CHFR-202ENST00000315585 ANKRD36BQ8N2N9 1353 aa19.52■□□□□ 0.71
CHFR-202ENST00000315585 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
CHFR-202ENST00000315585 DUSP27Q5VZP5 1158 aa19.51■□□□□ 0.71
CHFR-202ENST00000315585 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
CHFR-202ENST00000315585 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
CHFR-202ENST00000315585 SAFB2Q14151 953 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHFR-202ENST00000315585 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
CHFR-202ENST00000315585 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
CHFR-202ENST00000315585 SIRT1Q96EB6 747 aa19.5■□□□□ 0.71
CHFR-202ENST00000315585 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
CHFR-202ENST00000315585 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
CHFR-202ENST00000315585 NSD2O96028 1365 aa19.49■□□□□ 0.71
CHFR-202ENST00000315585 PLEKHH1Q9ULM0 1364 aa19.49■□□□□ 0.71
CHFR-202ENST00000315585 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
CHFR-202ENST00000315585 EID1Q9Y6B2 187 aa19.49■□□□□ 0.71
CHFR-202ENST00000315585 MINK1Q8N4C8 1332 aaPredicted RBP19.48■□□□□ 0.71
CHFR-202ENST00000315585 NOP58Q9Y2X3 529 aaKnown RBP19.48■□□□□ 0.71
CHFR-202ENST00000315585 E9PSI1 815 aa19.47■□□□□ 0.71
CHFR-202ENST00000315585 CEBPAP49715 358 aaPredicted RBP19.47■□□□□ 0.71
CHFR-202ENST00000315585 IPO9Q96P70 1041 aaKnown RBP19.47■□□□□ 0.71
CHFR-202ENST00000315585 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
CHFR-202ENST00000315585 KNDC1Q76NI1 1749 aa19.47■□□□□ 0.71
CHFR-202ENST00000315585 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
CHFR-202ENST00000315585 FAM135BQ49AJ0 1406 aa19.46■□□□□ 0.71
CHFR-202ENST00000315585 TRMT2AQ8IZ69 625 aaKnown RBP19.45■□□□□ 0.7
CHFR-202ENST00000315585 CRBNQ96SW2 442 aa19.45■□□□□ 0.7
CHFR-202ENST00000315585 TECPR2O15040 1411 aa19.45■□□□□ 0.7
CHFR-202ENST00000315585 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
CHFR-202ENST00000315585 THEMISQ8N1K5 641 aaPredicted RBP19.44■□□□□ 0.7
CHFR-202ENST00000315585 SLIT1O75093 1534 aa19.44■□□□□ 0.7
CHFR-202ENST00000315585 PLIN1O60240 522 aa19.44■□□□□ 0.7
CHFR-202ENST00000315585 CDK19Q9BWU1 502 aa19.44■□□□□ 0.7
CHFR-202ENST00000315585 METP08581 1390 aa19.43■□□□□ 0.7
CHFR-202ENST00000315585 NKTRP30414 1462 aaKnown RBP19.43■□□□□ 0.7
CHFR-202ENST00000315585 APAF1O14727 1248 aa19.43■□□□□ 0.7
CHFR-202ENST00000315585 TXNDC2Q86VQ3 553 aa19.43■□□□□ 0.7
CHFR-202ENST00000315585 CFAP53Q96M91 514 aa19.42■□□□□ 0.7
CHFR-202ENST00000315585 ARHGAP23Q9P227 1491 aa19.42■□□□□ 0.7
CHFR-202ENST00000315585 CENPQQ7L2Z9 268 aaPredicted RBP19.42■□□□□ 0.7
CHFR-202ENST00000315585 HDGFL2Q7Z4V5 671 aaPredicted RBP19.42■□□□□ 0.7
CHFR-202ENST00000315585 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
CHFR-202ENST00000315585 CPS1P31327 1500 aa19.41■□□□□ 0.7
CHFR-202ENST00000315585 NCBP3Q53F19 620 aaKnown RBP19.4■□□□□ 0.7
CHFR-202ENST00000315585 WAPLQ7Z5K2 1190 aa19.4■□□□□ 0.7
CHFR-202ENST00000315585 ADAMTS13Q76LX8 1427 aa19.39■□□□□ 0.69
CHFR-202ENST00000315585 PDE4AP27815 886 aa19.39■□□□□ 0.69
CHFR-202ENST00000315585 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
CHFR-202ENST00000315585 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
CHFR-202ENST00000315585 LTKP29376 864 aa19.38■□□□□ 0.69
CHFR-202ENST00000315585 BACH2Q9BYV9 841 aa19.38■□□□□ 0.69
CHFR-202ENST00000315585 WASLO00401 505 aaPredicted RBP19.36■□□□□ 0.69
CHFR-202ENST00000315585 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
CHFR-202ENST00000315585 RUNDC1Q96C34 613 aa19.36■□□□□ 0.69
CHFR-202ENST00000315585 ATP7BP35670 1465 aa19.36■□□□□ 0.69
CHFR-202ENST00000315585 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
CHFR-202ENST00000315585 MED14O60244 1454 aa19.35■□□□□ 0.69
CHFR-202ENST00000315585 RIMS1Q86UR5 1692 aaKnown RBP19.35■□□□□ 0.69
CHFR-202ENST00000315585 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
CHFR-202ENST00000315585 CABP1Q9NZU7 370 aa19.33■□□□□ 0.69
CHFR-202ENST00000315585 CEP170BQ9Y4F5 1589 aaPredicted RBP19.33■□□□□ 0.68
CHFR-202ENST00000315585 AAMPQ13685 434 aa19.33■□□□□ 0.68
CHFR-202ENST00000315585 PDE3AQ14432 1141 aa19.33■□□□□ 0.68
CHFR-202ENST00000315585 KDM2BQ8NHM5 1336 aa19.33■□□□□ 0.68
CHFR-202ENST00000315585 CD163L1Q9NR16 1453 aa19.32■□□□□ 0.68
CHFR-202ENST00000315585 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
CHFR-202ENST00000315585 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
CHFR-202ENST00000315585 WDR63Q8IWG1 891 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms