RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 STAC3Q96MF2 364 aa19.72■□□□□ 0.75
CT55-201ENST00000276241 NHSL1Q5SYE7 1610 aa19.72■□□□□ 0.75
CT55-201ENST00000276241 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
CT55-201ENST00000276241 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
CT55-201ENST00000276241 SAFB2Q14151 953 aaKnown RBP eCLIP19.7■□□□□ 0.74
CT55-201ENST00000276241 PRAM1Q96QH2 718 aa19.69■□□□□ 0.74
CT55-201ENST00000276241 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
CT55-201ENST00000276241 JCADQ9P266 1359 aa19.68■□□□□ 0.74
CT55-201ENST00000276241 NUTM2FA1L443 756 aa19.68■□□□□ 0.74
CT55-201ENST00000276241 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
CT55-201ENST00000276241 FMN2Q9NZ56 1722 aa19.67■□□□□ 0.74
CT55-201ENST00000276241 KIAA1210Q9ULL0 1709 aa19.67■□□□□ 0.74
CT55-201ENST00000276241 POGKQ9P215 609 aa19.67■□□□□ 0.74
CT55-201ENST00000276241 ARHGEF28Q8N1W1 1705 aaKnown RBP19.66■□□□□ 0.74
CT55-201ENST00000276241 SIRT1Q96EB6 747 aa19.66■□□□□ 0.74
CT55-201ENST00000276241 ORAI2Q96SN7 254 aa19.66■□□□□ 0.74
CT55-201ENST00000276241 SHPRHQ149N8 1683 aa19.65■□□□□ 0.74
CT55-201ENST00000276241 L3MBTL2Q969R5 705 aa19.65■□□□□ 0.74
CT55-201ENST00000276241 ADGRB2O60241 1585 aa19.64■□□□□ 0.73
CT55-201ENST00000276241 ESCO1Q5FWF5 840 aa19.63■□□□□ 0.73
CT55-201ENST00000276241 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
CT55-201ENST00000276241 MINK1Q8N4C8 1332 aaPredicted RBP19.6■□□□□ 0.73
CT55-201ENST00000276241 KIF1AQ12756 1690 aa19.59■□□□□ 0.73
CT55-201ENST00000276241 LRP6O75581 1613 aa19.59■□□□□ 0.73
CT55-201ENST00000276241 TRPM1Q7Z4N2 1603 aa19.59■□□□□ 0.73
CT55-201ENST00000276241 NBPF1Q3BBV0 1214 aa19.59■□□□□ 0.73
CT55-201ENST00000276241 ILDR2Q71H61 639 aa19.59■□□□□ 0.73
CT55-201ENST00000276241 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
CT55-201ENST00000276241 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
CT55-201ENST00000276241 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
CT55-201ENST00000276241 USP32Q8NFA0 1604 aa19.57■□□□□ 0.72
CT55-201ENST00000276241 LRRC59Q96AG4 307 aaKnown RBP19.56■□□□□ 0.72
CT55-201ENST00000276241 RGPD8O14715 1765 aaPredicted RBP19.56■□□□□ 0.72
CT55-201ENST00000276241 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
CT55-201ENST00000276241 XPCQ01831 940 aaPredicted RBP19.55■□□□□ 0.72
CT55-201ENST00000276241 PNPLA6Q8IY17 1366 aa19.55■□□□□ 0.72
CT55-201ENST00000276241 PXDNQ92626 1479 aa19.54■□□□□ 0.72
CT55-201ENST00000276241 SOS2Q07890 1332 aaPredicted RBP19.54■□□□□ 0.72
CT55-201ENST00000276241 NUTM2BA6NNL0 878 aaPredicted RBP19.54■□□□□ 0.72
CT55-201ENST00000276241 NUTM2EB1AL46 878 aaPredicted RBP19.54■□□□□ 0.72
CT55-201ENST00000276241 FOXO3O43524 673 aa19.54■□□□□ 0.72
CT55-201ENST00000276241 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
CT55-201ENST00000276241 NUTM2AQ8IVF1 878 aaPredicted RBP19.54■□□□□ 0.72
CT55-201ENST00000276241 TULP4Q9NRJ4 1543 aa19.54■□□□□ 0.72
CT55-201ENST00000276241 ANKARQ7Z5J8 1434 aa19.53■□□□□ 0.72
CT55-201ENST00000276241 ROCK2O75116 1388 aaKnown RBP19.53■□□□□ 0.72
CT55-201ENST00000276241 EIF3AQ14152 1382 aaKnown RBP19.52■□□□□ 0.72
CT55-201ENST00000276241 QRICH2Q9H0J4 1663 aa19.51■□□□□ 0.71
CT55-201ENST00000276241 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
CT55-201ENST00000276241 WASLO00401 505 aaPredicted RBP19.5■□□□□ 0.71
CT55-201ENST00000276241 PRR36Q9H6K5 1346 aa19.48■□□□□ 0.71
CT55-201ENST00000276241 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
CT55-201ENST00000276241 RGS17Q9UGC6 210 aaPredicted RBP19.48■□□□□ 0.71
CT55-201ENST00000276241 CENPJQ9HC77 1338 aaPredicted RBP19.48■□□□□ 0.71
CT55-201ENST00000276241 ATP7BP35670 1465 aa19.47■□□□□ 0.71
CT55-201ENST00000276241 COL22A1Q8NFW1 1626 aaPredicted RBP19.47■□□□□ 0.71
CT55-201ENST00000276241 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
CT55-201ENST00000276241 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
CT55-201ENST00000276241 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
CT55-201ENST00000276241 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
CT55-201ENST00000276241 TOPAZ1Q8N9V7 1692 aa19.44■□□□□ 0.7
CT55-201ENST00000276241 TNS3Q68CZ2 1445 aa19.43■□□□□ 0.7
CT55-201ENST00000276241 CDK19Q9BWU1 502 aa19.42■□□□□ 0.7
CT55-201ENST00000276241 ADAMTS2O95450 1211 aa19.42■□□□□ 0.7
CT55-201ENST00000276241 C8orf37Q96NL8 207 aa19.42■□□□□ 0.7
CT55-201ENST00000276241 GPRASP1Q5JY77 1395 aa19.41■□□□□ 0.7
CT55-201ENST00000276241 PSME1Q06323 249 aa19.41■□□□□ 0.7
CT55-201ENST00000276241 POTEAQ6S8J7 498 aa19.41■□□□□ 0.7
CT55-201ENST00000276241 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
CT55-201ENST00000276241 SPATA31A3Q5VYP0 1347 aa19.41■□□□□ 0.7
CT55-201ENST00000276241 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
CT55-201ENST00000276241 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
CT55-201ENST00000276241 TRPM3Q9HCF6 1732 aaPredicted RBP19.4■□□□□ 0.7
CT55-201ENST00000276241 AFF2P51816 1311 aa19.39■□□□□ 0.69
CT55-201ENST00000276241 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
CT55-201ENST00000276241 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.69
CT55-201ENST00000276241 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.69
CT55-201ENST00000276241 SBNO1A3KN83 1393 aa19.38■□□□□ 0.69
CT55-201ENST00000276241 CABP2Q9NPB3 220 aa19.37■□□□□ 0.69
CT55-201ENST00000276241 ZNF772Q68DY9 489 aaPredicted RBP19.36■□□□□ 0.69
CT55-201ENST00000276241 ABCA3Q99758 1704 aa19.36■□□□□ 0.69
CT55-201ENST00000276241 MARF1Q9Y4F3 1742 aaKnown RBP19.35■□□□□ 0.69
CT55-201ENST00000276241 PPIP5K1Q6PFW1 1433 aa19.35■□□□□ 0.69
CT55-201ENST00000276241 ARHGEF10O15013 1369 aa19.35■□□□□ 0.69
CT55-201ENST00000276241 SOCS7O14512 581 aa19.34■□□□□ 0.69
CT55-201ENST00000276241 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
CT55-201ENST00000276241 ALS2Q96Q42 1657 aa19.34■□□□□ 0.69
CT55-201ENST00000276241 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
CT55-201ENST00000276241 NGLY1Q96IV0 654 aa19.34■□□□□ 0.69
CT55-201ENST00000276241 EVC2Q86UK5 1308 aa19.33■□□□□ 0.68
CT55-201ENST00000276241 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
CT55-201ENST00000276241 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.68
CT55-201ENST00000276241 CCDC61Q9Y6R9 512 aa19.33■□□□□ 0.68
CT55-201ENST00000276241 CABLES1Q8TDN4 633 aa19.32■□□□□ 0.68
CT55-201ENST00000276241 POLR3AO14802 1390 aaPredicted RBP19.31■□□□□ 0.68
CT55-201ENST00000276241 ACEP12821 1306 aa19.31■□□□□ 0.68
CT55-201ENST00000276241 SBNO2Q9Y2G9 1366 aa19.27■□□□□ 0.68
CT55-201ENST00000276241 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
CT55-201ENST00000276241 USP21Q9UK80 565 aa19.27■□□□□ 0.68
CT55-201ENST00000276241 CRYBG1Q9Y4K1 1723 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms