RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
SHTN1-201ENST00000260777 CCDC9Q9Y3X0 531 aaKnown RBP19.25■□□□□ 0.67
SHTN1-201ENST00000260777 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
SHTN1-201ENST00000260777 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
SHTN1-201ENST00000260777 AKAP17AQ02040 695 aaKnown RBP19.25■□□□□ 0.67
SHTN1-201ENST00000260777 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
SHTN1-201ENST00000260777 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
SHTN1-201ENST00000260777 TPM1P09493 284 aa19.24■□□□□ 0.67
SHTN1-201ENST00000260777 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
SHTN1-201ENST00000260777 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
SHTN1-201ENST00000260777 VPS37CA5D8V6 355 aaPredicted RBP19.24■□□□□ 0.67
SHTN1-201ENST00000260777 EXOSC9Q06265 439 aaKnown RBP19.24■□□□□ 0.67
SHTN1-201ENST00000260777 FRAT2O75474 233 aaPredicted RBP19.23■□□□□ 0.67
SHTN1-201ENST00000260777 TSR1Q2NL82 804 aaKnown RBP19.23■□□□□ 0.67
SHTN1-201ENST00000260777 NAIPQ13075 1403 aa19.23■□□□□ 0.67
SHTN1-201ENST00000260777 WDR63Q8IWG1 891 aa19.23■□□□□ 0.67
SHTN1-201ENST00000260777 CCDC184Q52MB2 194 aa19.23■□□□□ 0.67
SHTN1-201ENST00000260777 TMX4Q9H1E5 349 aaPredicted RBP19.23■□□□□ 0.67
SHTN1-201ENST00000260777 CCDC39Q9UFE4 941 aa19.23■□□□□ 0.67
SHTN1-201ENST00000260777 TRIM29Q14134 588 aa19.22■□□□□ 0.67
SHTN1-201ENST00000260777 BCAR3O75815 825 aa19.22■□□□□ 0.67
SHTN1-201ENST00000260777 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
SHTN1-201ENST00000260777 RABEP1Q15276 862 aa19.22■□□□□ 0.67
SHTN1-201ENST00000260777 SASS6Q6UVJ0 657 aa19.21■□□□□ 0.67
SHTN1-201ENST00000260777 CPLX1O14810 134 aa19.21■□□□□ 0.67
SHTN1-201ENST00000260777 FAM13BQ9NYF5 915 aa19.21■□□□□ 0.67
SHTN1-201ENST00000260777 MCM2P49736 904 aa19.21■□□□□ 0.67
SHTN1-201ENST00000260777 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.66
SHTN1-201ENST00000260777 ZNF592Q92610 1267 aa19.21■□□□□ 0.66
SHTN1-201ENST00000260777 MBD3O95983 291 aa19.2■□□□□ 0.66
SHTN1-201ENST00000260777 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.2■□□□□ 0.66
SHTN1-201ENST00000260777 A0A0U1RQG5 324 aaPredicted RBP19.2■□□□□ 0.66
SHTN1-201ENST00000260777 GNAI3P08754 354 aa19.2■□□□□ 0.66
SHTN1-201ENST00000260777 GPS2Q13227 327 aa19.2■□□□□ 0.66
SHTN1-201ENST00000260777 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
SHTN1-201ENST00000260777 HOOK1Q9UJC3 728 aaKnown RBP19.19■□□□□ 0.66
SHTN1-201ENST00000260777 TPM2P07951 284 aa19.18■□□□□ 0.66
SHTN1-201ENST00000260777 PRG4Q92954 1404 aaPredicted RBP19.18■□□□□ 0.66
SHTN1-201ENST00000260777 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
SHTN1-201ENST00000260777 PES1O00541 588 aaKnown RBP19.18■□□□□ 0.66
SHTN1-201ENST00000260777 LETM1O95202 739 aaPredicted RBP19.18■□□□□ 0.66
SHTN1-201ENST00000260777 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
SHTN1-201ENST00000260777 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
SHTN1-201ENST00000260777 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
SHTN1-201ENST00000260777 CNTROBQ8N137 903 aa19.17■□□□□ 0.66
SHTN1-201ENST00000260777 TRDNQ13061 729 aa19.17■□□□□ 0.66
SHTN1-201ENST00000260777 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
SHTN1-201ENST00000260777 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
SHTN1-201ENST00000260777 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
SHTN1-201ENST00000260777 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
SHTN1-201ENST00000260777 MARCH6O60337 910 aa19.16■□□□□ 0.66
SHTN1-201ENST00000260777 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
SHTN1-201ENST00000260777 PSMA5P28066 241 aa19.16■□□□□ 0.66
SHTN1-201ENST00000260777 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
SHTN1-201ENST00000260777 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
SHTN1-201ENST00000260777 BRPF3Q9ULD4 1205 aa19.15■□□□□ 0.66
SHTN1-201ENST00000260777 PSME1Q06323 249 aa19.14■□□□□ 0.66
SHTN1-201ENST00000260777 CCDC173Q0VFZ6 552 aa19.14■□□□□ 0.66
SHTN1-201ENST00000260777 CAVIN1Q6NZI2 390 aaKnown RBP19.14■□□□□ 0.66
SHTN1-201ENST00000260777 CCDC70Q6NSX1 233 aa19.14■□□□□ 0.65
SHTN1-201ENST00000260777 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
SHTN1-201ENST00000260777 MTERF4Q7Z6M4 381 aaKnown RBP19.13■□□□□ 0.65
SHTN1-201ENST00000260777 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
SHTN1-201ENST00000260777 ANKRD20A12PQ8NF67 263 aa19.13■□□□□ 0.65
SHTN1-201ENST00000260777 TSR2Q969E8 191 aaKnown RBP19.13■□□□□ 0.65
SHTN1-201ENST00000260777 CWC22Q9HCG8 908 aaKnown RBP19.13■□□□□ 0.65
SHTN1-201ENST00000260777 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
SHTN1-201ENST00000260777 ATF7IPQ6VMQ6 1270 aa19.13■□□□□ 0.65
SHTN1-201ENST00000260777 ZNF771Q7L3S4 317 aaPredicted RBP19.13■□□□□ 0.65
SHTN1-201ENST00000260777 HOMER1Q86YM7 354 aa19.13■□□□□ 0.65
SHTN1-201ENST00000260777 SLC12A5Q9H2X9 1139 aa19.13■□□□□ 0.65
SHTN1-201ENST00000260777 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
SHTN1-201ENST00000260777 NEK4P51957 841 aa19.12■□□□□ 0.65
SHTN1-201ENST00000260777 MAP7D2Q96T17 732 aa19.12■□□□□ 0.65
SHTN1-201ENST00000260777 APPP05067 770 aa19.12■□□□□ 0.65
SHTN1-201ENST00000260777 IFT57Q9NWB7 429 aa19.12■□□□□ 0.65
SHTN1-201ENST00000260777 EPRSP07814 1512 aaKnown RBP19.12■□□□□ 0.65
SHTN1-201ENST00000260777 CLASRPQ8N2M8 674 aaKnown RBP19.11■□□□□ 0.65
SHTN1-201ENST00000260777 SLFN5Q08AF3 891 aa19.11■□□□□ 0.65
SHTN1-201ENST00000260777 R3HCC1Q9Y3T6 440 aaKnown RBP19.11■□□□□ 0.65
SHTN1-201ENST00000260777 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
SHTN1-201ENST00000260777 TSPY26PQ9H489 355 aa19.1■□□□□ 0.65
SHTN1-201ENST00000260777 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
SHTN1-201ENST00000260777 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
SHTN1-201ENST00000260777 IPO7O95373 1038 aaKnown RBP19.1■□□□□ 0.65
SHTN1-201ENST00000260777 CCDC47Q96A33 483 aaKnown RBP19.1■□□□□ 0.65
SHTN1-201ENST00000260777 NAT10Q9H0A0 1025 aaKnown RBP19.1■□□□□ 0.65
SHTN1-201ENST00000260777 K7ELQ4 463 aaPredicted RBP19.1■□□□□ 0.65
SHTN1-201ENST00000260777 PRPF40AO75400 957 aaKnown RBP19.1■□□□□ 0.65
SHTN1-201ENST00000260777 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
SHTN1-201ENST00000260777 G3V3G9 751 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 GNAI2P04899 355 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 DCAF8Q5TAQ9 597 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 SURF6O75683 361 aaKnown RBP19.09■□□□□ 0.65
SHTN1-201ENST00000260777 TEX35Q5T0J7 233 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 RNF214Q8ND24 703 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 HIP1O00291 1037 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 CEP89Q96ST8 783 aa19.09■□□□□ 0.65
SHTN1-201ENST00000260777 NFXL1Q6ZNB6 911 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms