RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 ZNF521Q96K83 1311 aa21.48■■□□□ 1.03
PTPN18-201ENST00000175756 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
PTPN18-201ENST00000175756 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
PTPN18-201ENST00000175756 STAC3Q96MF2 364 aa21.48■■□□□ 1.03
PTPN18-201ENST00000175756 ASXL1Q8IXJ9 1541 aa21.47■■□□□ 1.03
PTPN18-201ENST00000175756 GBP4Q96PP9 640 aa21.47■■□□□ 1.03
PTPN18-201ENST00000175756 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
PTPN18-201ENST00000175756 FOXD4L5Q5VV16 416 aaPredicted RBP21.47■■□□□ 1.03
PTPN18-201ENST00000175756 WDR63Q8IWG1 891 aa21.47■■□□□ 1.03
PTPN18-201ENST00000175756 FOXD4L4Q8WXT5 416 aaPredicted RBP21.47■■□□□ 1.03
PTPN18-201ENST00000175756 TBC1D32Q96NH3 1257 aa21.47■■□□□ 1.03
PTPN18-201ENST00000175756 GLIPR1L2Q4G1C9 344 aa21.47■■□□□ 1.03
PTPN18-201ENST00000175756 ABCC10Q5T3U5 1492 aa21.46■■□□□ 1.03
PTPN18-201ENST00000175756 TMEM57Q8N5G2 664 aa21.45■■□□□ 1.03
PTPN18-201ENST00000175756 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
PTPN18-201ENST00000175756 TRAPPC8Q9Y2L5 1435 aa21.44■■□□□ 1.02
PTPN18-201ENST00000175756 FBLN1P23142 703 aa21.44■■□□□ 1.02
PTPN18-201ENST00000175756 ATF7IPQ6VMQ6 1270 aa21.44■■□□□ 1.02
PTPN18-201ENST00000175756 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
PTPN18-201ENST00000175756 TRIM27P14373 513 aa21.43■■□□□ 1.02
PTPN18-201ENST00000175756 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
PTPN18-201ENST00000175756 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
PTPN18-201ENST00000175756 KDM5DQ9BY66 1539 aa21.42■■□□□ 1.02
PTPN18-201ENST00000175756 DIAPH1O60610 1272 aaKnown RBP21.42■■□□□ 1.02
PTPN18-201ENST00000175756 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
PTPN18-201ENST00000175756 ARID3AQ99856 593 aa21.41■■□□□ 1.02
PTPN18-201ENST00000175756 TMPOP42166 694 aaKnown RBP21.4■■□□□ 1.02
PTPN18-201ENST00000175756 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
PTPN18-201ENST00000175756 NOL8Q76FK4 1167 aaKnown RBP21.39■■□□□ 1.02
PTPN18-201ENST00000175756 TRMT2AQ8IZ69 625 aaKnown RBP21.39■■□□□ 1.02
PTPN18-201ENST00000175756 DDX49Q9Y6V7 483 aaKnown RBP21.39■■□□□ 1.02
PTPN18-201ENST00000175756 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
PTPN18-201ENST00000175756 XRCC6P12956 609 aaKnown RBP eCLIP21.39■■□□□ 1.01
PTPN18-201ENST00000175756 MLECQ14165 292 aa21.39■■□□□ 1.01
PTPN18-201ENST00000175756 PIK3C2GO75747 1445 aa21.38■■□□□ 1.01
PTPN18-201ENST00000175756 VGFO15240 615 aaPredicted RBP21.38■■□□□ 1.01
PTPN18-201ENST00000175756 PLEKHG5O94827 1062 aa21.38■■□□□ 1.01
PTPN18-201ENST00000175756 NUTM2FA1L443 756 aa21.37■■□□□ 1.01
PTPN18-201ENST00000175756 NUP160Q12769 1436 aa21.37■■□□□ 1.01
PTPN18-201ENST00000175756 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
PTPN18-201ENST00000175756 FOXD4L6Q3SYB3 417 aaPredicted RBP21.36■■□□□ 1.01
PTPN18-201ENST00000175756 FOXD4L3Q6VB84 417 aaPredicted RBP21.36■■□□□ 1.01
PTPN18-201ENST00000175756 USP19O94966 1318 aa21.36■■□□□ 1.01
PTPN18-201ENST00000175756 RRAGDQ9NQL2 400 aaPredicted RBP21.36■■□□□ 1.01
PTPN18-201ENST00000175756 NINLQ9Y2I6 1382 aa21.35■■□□□ 1.01
PTPN18-201ENST00000175756 AAMPQ13685 434 aa21.35■■□□□ 1.01
PTPN18-201ENST00000175756 MRE11P49959 708 aa21.34■■□□□ 1.01
PTPN18-201ENST00000175756 NOS1P29475 1434 aa21.33■■□□□ 1.01
PTPN18-201ENST00000175756 SLC4A10Q6U841 1118 aa21.33■■□□□ 1
PTPN18-201ENST00000175756 CDC42BPAQ5VT25 1732 aa21.33■■□□□ 1
PTPN18-201ENST00000175756 GRPEL1Q9HAV7 217 aa21.32■■□□□ 1
PTPN18-201ENST00000175756 KIF16BQ96L93 1317 aa21.32■■□□□ 1
PTPN18-201ENST00000175756 HSP90AA2PQ14568 343 aaPredicted RBP21.32■■□□□ 1
PTPN18-201ENST00000175756 CHD1LQ86WJ1 897 aa21.32■■□□□ 1
PTPN18-201ENST00000175756 PRAM1Q96QH2 718 aa21.32■■□□□ 1
PTPN18-201ENST00000175756 MSNP26038 577 aaKnown RBP21.31■■□□□ 1
PTPN18-201ENST00000175756 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
PTPN18-201ENST00000175756 CASC1Q6TDU7 716 aa21.31■■□□□ 1
PTPN18-201ENST00000175756 CHMP4BQ9H444 224 aaKnown RBP21.31■■□□□ 1
PTPN18-201ENST00000175756 DUOX2Q9NRD8 1548 aa21.3■■□□□ 1
PTPN18-201ENST00000175756 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
PTPN18-201ENST00000175756 RBM42Q9BTD8 480 aaKnown RBP21.3■■□□□ 1
PTPN18-201ENST00000175756 PTMAP06454 111 aaKnown RBP21.3■■□□□ 1
PTPN18-201ENST00000175756 VSIG10Q8N0Z9 540 aa21.3■■□□□ 1
PTPN18-201ENST00000175756 CABP1Q9NZU7 370 aa21.3■■□□□ 1
PTPN18-201ENST00000175756 INSRP06213 1382 aa21.29■■□□□ 1
PTPN18-201ENST00000175756 TRPM1Q7Z4N2 1603 aa21.29■■□□□ 1
PTPN18-201ENST00000175756 MCTP1Q6DN14 999 aa21.28■■□□□ 1
PTPN18-201ENST00000175756 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
PTPN18-201ENST00000175756 PLCB2Q00722 1185 aa21.27■■□□□ 1
PTPN18-201ENST00000175756 TNPO1Q92973 898 aaKnown RBP21.27■■□□□ 1
PTPN18-201ENST00000175756 EIF2AK4Q9P2K8 1649 aaKnown RBP21.27■■□□□ 1
PTPN18-201ENST00000175756 PRDM15P57071 1507 aaPredicted RBP21.27■■□□□ 1
PTPN18-201ENST00000175756 ESF1Q9H501 851 aaKnown RBP21.27■■□□□ 1
PTPN18-201ENST00000175756 PLCH2O75038 1416 aa21.26■□□□□ 0.99
PTPN18-201ENST00000175756 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
PTPN18-201ENST00000175756 DCTN1Q14203 1278 aa21.24■□□□□ 0.99
PTPN18-201ENST00000175756 ABCA8O94911 1581 aa21.24■□□□□ 0.99
PTPN18-201ENST00000175756 C14orf93Q9H972 538 aaKnown RBP21.24■□□□□ 0.99
PTPN18-201ENST00000175756 DNTTIP2Q5QJE6 756 aaKnown RBP21.23■□□□□ 0.99
PTPN18-201ENST00000175756 ESPNB1AK53 854 aa21.23■□□□□ 0.99
PTPN18-201ENST00000175756 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
PTPN18-201ENST00000175756 SSFA2P28290 1259 aa21.22■□□□□ 0.99
PTPN18-201ENST00000175756 CAVIN1Q6NZI2 390 aaKnown RBP21.22■□□□□ 0.99
PTPN18-201ENST00000175756 CROCC2H7BZ55 1655 aa21.21■□□□□ 0.99
PTPN18-201ENST00000175756 ARHGEF5Q12774 1597 aa21.21■□□□□ 0.99
PTPN18-201ENST00000175756 ANTXR1Q9H6X2 564 aa21.21■□□□□ 0.99
PTPN18-201ENST00000175756 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
PTPN18-201ENST00000175756 NECTIN2Q92692 538 aa21.2■□□□□ 0.99
PTPN18-201ENST00000175756 NPC1L1Q9UHC9 1359 aa21.2■□□□□ 0.98
PTPN18-201ENST00000175756 NASPP49321 788 aaPredicted RBP21.2■□□□□ 0.98
PTPN18-201ENST00000175756 TWISTNBQ3B726 338 aaPredicted RBP21.2■□□□□ 0.98
PTPN18-201ENST00000175756 SKOR2Q2VWA4 1001 aaPredicted RBP21.2■□□□□ 0.98
PTPN18-201ENST00000175756 CDK19Q9BWU1 502 aa21.19■□□□□ 0.98
PTPN18-201ENST00000175756 K7ELQ4 463 aaPredicted RBP21.19■□□□□ 0.98
PTPN18-201ENST00000175756 TRIM6-TRIM34B2RNG4 842 aa21.18■□□□□ 0.98
PTPN18-201ENST00000175756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.18■□□□□ 0.98
PTPN18-201ENST00000175756 CDC45O75419 566 aa21.18■□□□□ 0.98
PTPN18-201ENST00000175756 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
PTPN18-201ENST00000175756 TBC1D9Q6ZT07 1266 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms