RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 KDM2AQ9Y2K7 1162 aa41.03■■■■■ 4.16
PDCD2-201ENST00000167218 STAC3Q96MF2 364 aa41.02■■■■■ 4.16
PDCD2-201ENST00000167218 RGS17Q9UGC6 210 aaPredicted RBP41.02■■■■■ 4.16
PDCD2-201ENST00000167218 DDX17Q92841 729 aaKnown RBP41■■■■■ 4.15
PDCD2-201ENST00000167218 SHPRHQ149N8 1683 aa41■■■■■ 4.15
PDCD2-201ENST00000167218 ORAI2Q96SN7 254 aa40.99■■■■■ 4.15
PDCD2-201ENST00000167218 ADGRB1O14514 1584 aa40.99■■■■■ 4.15
PDCD2-201ENST00000167218 SOCS7O14512 581 aa40.95■■■■■ 4.15
PDCD2-201ENST00000167218 SPATA31A6Q5VVP1 1343 aa40.94■■■■■ 4.15
PDCD2-201ENST00000167218 LRP6O75581 1613 aa40.91■■■■■ 4.14
PDCD2-201ENST00000167218 DLC1Q96QB1 1528 aa40.91■■■■■ 4.14
PDCD2-201ENST00000167218 LRRC59Q96AG4 307 aaKnown RBP40.89■■■■■ 4.14
PDCD2-201ENST00000167218 PRAM1Q96QH2 718 aa40.86■■■■■ 4.13
PDCD2-201ENST00000167218 FMN2Q9NZ56 1722 aa40.86■■■■■ 4.13
PDCD2-201ENST00000167218 SOS2Q07890 1332 aaPredicted RBP40.85■■■■■ 4.13
PDCD2-201ENST00000167218 ESCO1Q5FWF5 840 aa40.83■■■■■ 4.13
PDCD2-201ENST00000167218 NUTM2FA1L443 756 aa40.82■■■■■ 4.13
PDCD2-201ENST00000167218 TRAK1Q9UPV9 953 aa40.81■■■■■ 4.12
PDCD2-201ENST00000167218 PNPLA6Q8IY17 1366 aa40.8■■■■■ 4.12
PDCD2-201ENST00000167218 SAFB2Q14151 953 aaKnown RBP eCLIP40.79■■■■■ 4.12
PDCD2-201ENST00000167218 POTEAQ6S8J7 498 aa40.77■■■■■ 4.12
PDCD2-201ENST00000167218 POGKQ9P215 609 aa40.76■■■■■ 4.12
PDCD2-201ENST00000167218 RGPD8O14715 1765 aaPredicted RBP40.73■■■■■ 4.11
PDCD2-201ENST00000167218 NPHP3Q7Z494 1330 aa40.72■■■■■ 4.11
PDCD2-201ENST00000167218 NUTM2BA6NNL0 878 aaPredicted RBP40.72■■■■■ 4.11
PDCD2-201ENST00000167218 NUTM2EB1AL46 878 aaPredicted RBP40.72■■■■■ 4.11
PDCD2-201ENST00000167218 NUTM2AQ8IVF1 878 aaPredicted RBP40.72■■■■■ 4.11
PDCD2-201ENST00000167218 KIAA1210Q9ULL0 1709 aa40.72■■■■■ 4.11
PDCD2-201ENST00000167218 PXDNQ92626 1479 aa40.71■■■■■ 4.11
PDCD2-201ENST00000167218 FOXO3O43524 673 aa40.71■■■■■ 4.11
PDCD2-201ENST00000167218 SIN3AQ96ST3 1273 aa40.71■■■■■ 4.11
PDCD2-201ENST00000167218 ADGRB2O60241 1585 aa40.7■■■■■ 4.11
PDCD2-201ENST00000167218 MEX3CQ5U5Q3 659 aaKnown RBP40.69■■■■■ 4.1
PDCD2-201ENST00000167218 ARHGEF28Q8N1W1 1705 aaKnown RBP40.67■■■■■ 4.1
PDCD2-201ENST00000167218 TRIM26Q12899 539 aaPredicted RBP40.66■■■■■ 4.1
PDCD2-201ENST00000167218 KIF1AQ12756 1690 aa40.66■■■■■ 4.1
PDCD2-201ENST00000167218 L3MBTL2Q969R5 705 aa40.64■■■■■ 4.1
PDCD2-201ENST00000167218 XPCQ01831 940 aaPredicted RBP40.63■■■■■ 4.09
PDCD2-201ENST00000167218 USP32Q8NFA0 1604 aa40.62■■■■■ 4.09
PDCD2-201ENST00000167218 NBPF1Q3BBV0 1214 aa40.61■■■■■ 4.09
PDCD2-201ENST00000167218 HIRIP3Q9BW71 556 aaPredicted RBP40.61■■■■■ 4.09
PDCD2-201ENST00000167218 MINK1Q8N4C8 1332 aaPredicted RBP40.61■■■■■ 4.09
PDCD2-201ENST00000167218 COL22A1Q8NFW1 1626 aaPredicted RBP40.6■■■■■ 4.09
PDCD2-201ENST00000167218 ANKARQ7Z5J8 1434 aa40.59■■■■■ 4.09
PDCD2-201ENST00000167218 PHF8Q9UPP1 1060 aa40.58■■■■■ 4.09
PDCD2-201ENST00000167218 NEUROD1Q13562 356 aa40.56■■■■■ 4.08
PDCD2-201ENST00000167218 ZNF772Q68DY9 489 aaPredicted RBP40.55■■■■■ 4.08
PDCD2-201ENST00000167218 WASLO00401 505 aaPredicted RBP40.53■■■■■ 4.08
PDCD2-201ENST00000167218 PRR36Q9H6K5 1346 aa40.51■■■■■ 4.08
PDCD2-201ENST00000167218 KRT28Q7Z3Y7 464 aa40.51■■■■■ 4.08
PDCD2-201ENST00000167218 AFF2P51816 1311 aa40.5■■■■■ 4.07
PDCD2-201ENST00000167218 TULP4Q9NRJ4 1543 aa40.5■■■■■ 4.07
PDCD2-201ENST00000167218 SPATA31A3Q5VYP0 1347 aa40.49■■■■■ 4.07
PDCD2-201ENST00000167218 ADAMTS2O95450 1211 aa40.48■■■■■ 4.07
PDCD2-201ENST00000167218 C8orf37Q96NL8 207 aa40.48■■■■■ 4.07
PDCD2-201ENST00000167218 EIF3AQ14152 1382 aaKnown RBP40.48■■■■■ 4.07
PDCD2-201ENST00000167218 PMFBP1Q8TBY8 1022 aa40.45■■■■■ 4.07
PDCD2-201ENST00000167218 TRPM1Q7Z4N2 1603 aa40.41■■■■■ 4.06
PDCD2-201ENST00000167218 PSME1Q06323 249 aa40.4■■■■■ 4.06
PDCD2-201ENST00000167218 SBNO1A3KN83 1393 aa40.38■■■■■ 4.06
PDCD2-201ENST00000167218 NGLY1Q96IV0 654 aa40.38■■■■■ 4.05
PDCD2-201ENST00000167218 TNS3Q68CZ2 1445 aa40.38■■■■■ 4.05
PDCD2-201ENST00000167218 ATP7BP35670 1465 aa40.37■■■■■ 4.05
PDCD2-201ENST00000167218 CDK19Q9BWU1 502 aa40.36■■■■■ 4.05
PDCD2-201ENST00000167218 MARF1Q9Y4F3 1742 aaKnown RBP40.35■■■■■ 4.05
PDCD2-201ENST00000167218 NUDT16Q96DE0 195 aaKnown RBP40.34■■■■■ 4.05
PDCD2-201ENST00000167218 FNBP4Q8N3X1 1017 aaPredicted RBP40.33■■■■■ 4.05
PDCD2-201ENST00000167218 RXRBP28702 533 aa40.32■■■■■ 4.05
PDCD2-201ENST00000167218 TRPM3Q9HCF6 1732 aaPredicted RBP40.32■■■■■ 4.05
PDCD2-201ENST00000167218 NBPF8Q3BBV2 869 aa40.31■■■■■ 4.04
PDCD2-201ENST00000167218 CENPJQ9HC77 1338 aaPredicted RBP40.31■■■■■ 4.04
PDCD2-201ENST00000167218 ITSN1Q15811 1721 aa40.3■■■■■ 4.04
PDCD2-201ENST00000167218 QTRT2Q9H974 415 aaKnown RBP40.29■■■■■ 4.04
PDCD2-201ENST00000167218 QRICH2Q9H0J4 1663 aa40.26■■■■■ 4.04
PDCD2-201ENST00000167218 ARHGEF10O15013 1369 aa40.25■■■■■ 4.03
PDCD2-201ENST00000167218 GPRASP1Q5JY77 1395 aa40.25■■■■■ 4.03
PDCD2-201ENST00000167218 TOPAZ1Q8N9V7 1692 aa40.25■■■■■ 4.03
PDCD2-201ENST00000167218 USP21Q9UK80 565 aa40.25■■■■■ 4.03
PDCD2-201ENST00000167218 ROCK2O75116 1388 aaKnown RBP40.24■■■■■ 4.03
PDCD2-201ENST00000167218 NGDNQ8NEJ9 315 aaKnown RBP40.24■■■■■ 4.03
PDCD2-201ENST00000167218 ALS2Q96Q42 1657 aa40.24■■■■■ 4.03
PDCD2-201ENST00000167218 CDK12Q9NYV4 1490 aaPredicted RBP40.23■■■■■ 4.03
PDCD2-201ENST00000167218 CABLES1Q8TDN4 633 aa40.22■■■■■ 4.03
PDCD2-201ENST00000167218 LMOD2Q6P5Q4 547 aa40.21■■■■■ 4.03
PDCD2-201ENST00000167218 CCDC61Q9Y6R9 512 aa40.21■■■■■ 4.03
PDCD2-201ENST00000167218 BCL9LQ86UU0 1499 aa40.2■■■■■ 4.03
PDCD2-201ENST00000167218 ABCA3Q99758 1704 aa40.2■■■■■ 4.03
PDCD2-201ENST00000167218 RBM6P78332 1123 aaKnown RBP40.2■■■■■ 4.03
PDCD2-201ENST00000167218 TONSLQ96HA7 1378 aa40.18■■■■■ 4.02
PDCD2-201ENST00000167218 PLEKHG3A1L390 1219 aa40.17■■■■■ 4.02
PDCD2-201ENST00000167218 ATRNO75882 1429 aa40.16■■■■■ 4.02
PDCD2-201ENST00000167218 POLR3AO14802 1390 aaPredicted RBP40.16■■■■■ 4.02
PDCD2-201ENST00000167218 TRPC5Q9UL62 973 aaPredicted RBP40.16■■■■■ 4.02
PDCD2-201ENST00000167218 SLIT2O94813 1529 aa40.14■■■■■ 4.02
PDCD2-201ENST00000167218 CABP2Q9NPB3 220 aa40.13■■■■■ 4.01
PDCD2-201ENST00000167218 ACEP12821 1306 aa40.13■■■■■ 4.01
PDCD2-201ENST00000167218 PLEKHG5O94827 1062 aa40.12■■■■■ 4.01
PDCD2-201ENST00000167218 SRPK2P78362 688 aaKnown RBP40.12■■■■■ 4.01
PDCD2-201ENST00000167218 RGS12O14924 1447 aa40.11■■■■■ 4.01
PDCD2-201ENST00000167218 HAP1P54257 671 aaPredicted RBP40.1■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms