RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	BET1	P22804	142 aa		4.79	□□□□□ -1.64
TGA1	tA(UGC)A	SFT1	P43682	97 aa		4.79	□□□□□ -1.64
TGA1	tA(UGC)A	HUR1	P45820	110 aa		4.79	□□□□□ -1.64
TGA1	tA(UGC)A	LSM6	Q06406	86 aa	Known RBP	4.79	□□□□□ -1.64
TGA1	tA(UGC)A	CMC4	Q3E7A9	73 aa		4.79	□□□□□ -1.64
TGA1	tA(UGC)A	PAI3	P01094	68 aa		4.78	□□□□□ -1.64
TGA1	tA(UGC)A	SAE3	P89114	91 aa		4.78	□□□□□ -1.64
TGA1	tA(UGC)A	NHP2	P32495	156 aa	Predicted RBP	4.77	□□□□□ -1.65
TGA1	tA(UGC)A	YNL184C	P53876	108 aa		4.77	□□□□□ -1.65
TGA1	tA(UGC)A	DSE2	P38844	325 aa		4.74	□□□□□ -1.65
TGA1	tA(UGC)A	RSM18	P40033	138 aa		4.73	□□□□□ -1.65
TGA1	tA(UGC)A	TDA8	Q6B2U8	126 aa		4.73	□□□□□ -1.65
TGA1	tA(UGC)A	YHR139C-A	O13536	103 aa		4.72	□□□□□ -1.65
TGA1	tA(UGC)A	OST2	P46964	130 aa		4.7	□□□□□ -1.66
TGA1	tA(UGC)A	YIL102C-A	Q2V2P5	75 aa		4.69	□□□□□ -1.66
TGA1	tA(UGC)A	YHL005C	P38752	130 aa		4.67	□□□□□ -1.66
TGA1	tA(UGC)A	RPL37B	P51402	88 aa	Known RBP	4.67	□□□□□ -1.66
TGA1	tA(UGC)A	YAL063C-A	Q3E791	96 aa		4.67	□□□□□ -1.66
TGA1	tA(UGC)A	YFR009W-A	P0C5M9	85 aa		4.66	□□□□□ -1.66
TGA1	tA(UGC)A	YJR107C-A	P0CT86	78 aa		4.66	□□□□□ -1.66
TGA1	tA(UGC)A	RSM19	P53733	91 aa	Predicted RBP	4.66	□□□□□ -1.66
TGA1	tA(UGC)A	CWC27	Q02770	301 aa		4.66	□□□□□ -1.66
TGA1	tA(UGC)A	YHL018W	P38744	120 aa	Predicted RBP	4.65	□□□□□ -1.67
TGA1	tA(UGC)A	YEL045C	P32616	141 aa		4.64	□□□□□ -1.67
TGA1	tA(UGC)A	YNL198C	P40166	100 aa		4.64	□□□□□ -1.67
TGA1	tA(UGC)A	ATP18	P81450	59 aa		4.64	□□□□□ -1.67
TGA1	tA(UGC)A	GLC8	P41818	229 aa		4.63	□□□□□ -1.67
TGA1	tA(UGC)A	YAR1	P46683	200 aa		4.63	□□□□□ -1.67
TGA1	tA(UGC)A	YPR170W-B	P0C5R9	85 aa		4.62	□□□□□ -1.67
TGA1	tA(UGC)A	TSC3	Q3E790	80 aa		4.62	□□□□□ -1.67
TGA1	tA(UGC)A	YOL097W-A	Q3E7Y9	61 aa		4.62	□□□□□ -1.67
TGA1	tA(UGC)A	YNL122C	P53921	115 aa	Predicted RBP	4.61	□□□□□ -1.67
TGA1	tA(UGC)A	ECM19	Q06011	112 aa		4.61	□□□□□ -1.67
TGA1	tA(UGC)A	YLR162W	Q06235	118 aa		4.61	□□□□□ -1.67
TGA1	tA(UGC)A	YHR213W-B	Q8TGK1	99 aa		4.6	□□□□□ -1.67
TGA1	tA(UGC)A	YLR157W-D	P0CE99	70 aa		4.59	□□□□□ -1.67
TGA1	tA(UGC)A	UIP3	P39547	235 aa		4.58	□□□□□ -1.68
TGA1	tA(UGC)A	MIC10	Q96VH5	97 aa		4.58	□□□□□ -1.68
TGA1	tA(UGC)A	YJL133C-A	Q3E7A3	74 aa		4.57	□□□□□ -1.68
TGA1	tA(UGC)A	ICS3	P47034	131 aa		4.56	□□□□□ -1.68
TGA1	tA(UGC)A	SHH4	Q06236	168 aa		4.56	□□□□□ -1.68
TGA1	tA(UGC)A	COX7	P10174	60 aa		4.54	□□□□□ -1.68
TGA1	tA(UGC)A	COX23	P38824	151 aa		4.54	□□□□□ -1.68
TGA1	tA(UGC)A	YDR381C-A	Q3E6R5	114 aa		4.52	□□□□□ -1.69
TGA1	tA(UGC)A	YOL014W	Q08110	124 aa		4.51	□□□□□ -1.69
TGA1	tA(UGC)A	EDC1	P53080	175 aa	Predicted RBP	4.48	□□□□□ -1.69
TGA1	tA(UGC)A	YCR043C	P25361	127 aa		4.46	□□□□□ -1.7
TGA1	tA(UGC)A	YKL069W	P36088	180 aa		4.45	□□□□□ -1.7
TGA1	tA(UGC)A	ISD11	Q6Q560	94 aa		4.44	□□□□□ -1.7
TGA1	tA(UGC)A	YHR073W-A	P0C5N7	58 aa		4.43	□□□□□ -1.7
TGA1	tA(UGC)A	RPA12	P32529	125 aa	Known RBP	4.43	□□□□□ -1.7
TGA1	tA(UGC)A	COF1	Q03048	143 aa	Known RBP	4.42	□□□□□ -1.7
TGA1	tA(UGC)A	YDL012C	Q12489	107 aa		4.42	□□□□□ -1.7
TGA1	tA(UGC)A	YBR182C-A	Q8TGU6	64 aa		4.42	□□□□□ -1.7
TGA1	tA(UGC)A	PBI2	P0CT04	75 aa	Known RBP	4.4	□□□□□ -1.71
TGA1	tA(UGC)A	SOH1	P38633	127 aa		4.39	□□□□□ -1.71
TGA1	tA(UGC)A	RPL38	P49167	78 aa	Known RBP	4.39	□□□□□ -1.71
TGA1	tA(UGC)A	TDA2	P40045	126 aa		4.38	□□□□□ -1.71
TGA1	tA(UGC)A	LSO2	Q3E772	92 aa	Known RBP	4.37	□□□□□ -1.71
TGA1	tA(UGC)A	YCR050C	P25630	102 aa		4.36	□□□□□ -1.71
TGA1	tA(UGC)A	YER187W	P40102	141 aa		4.35	□□□□□ -1.71
TGA1	tA(UGC)A	RPL36A	P05745	100 aa	Predicted RBP	4.34	□□□□□ -1.71
TGA1	tA(UGC)A	YAR064W	P39563	99 aa		4.34	□□□□□ -1.71
TGA1	tA(UGC)A	YGR164W	P53291	111 aa		4.34	□□□□□ -1.71
TGA1	tA(UGC)A	YHL042W	P38729	150 aa		4.33	□□□□□ -1.72
TGA1	tA(UGC)A	TMA7	Q3E764	64 aa	Known RBP	4.33	□□□□□ -1.72
TGA1	tA(UGC)A	YLR361C-A	Q3E795	98 aa		4.32	□□□□□ -1.72
TGA1	tA(UGC)A	YCR085W	P25650	117 aa		4.31	□□□□□ -1.72
TGA1	tA(UGC)A	YJR128W	P47162	119 aa		4.31	□□□□□ -1.72
TGA1	tA(UGC)A	ATP20	Q12233	115 aa		4.31	□□□□□ -1.72
TGA1	tA(UGC)A	YOR316C-A	Q3E806	69 aa		4.31	□□□□□ -1.72
TGA1	tA(UGC)A	FYV12	Q08559	129 aa		4.29	□□□□□ -1.72
TGA1	tA(UGC)A	Q0017	Q9ZZX8	53 aa		4.29	□□□□□ -1.72
TGA1	tA(UGC)A	RAD6	P06104	172 aa		4.28	□□□□□ -1.72
TGA1	tA(UGC)A	SKI6	P46948	246 aa	Predicted RBP	4.27	□□□□□ -1.73
TGA1	tA(UGC)A	YPR153W	Q06537	140 aa		4.27	□□□□□ -1.73
TGA1	tA(UGC)A	YOR304C-A	O14468	76 aa		4.26	□□□□□ -1.73
TGA1	tA(UGC)A	RPP2A	P05319	106 aa	Known RBP	4.24	□□□□□ -1.73
TGA1	tA(UGC)A	YPL080C	Q02826	108 aa		4.23	□□□□□ -1.73
TGA1	tA(UGC)A	YJL144W	P47009	104 aa		4.19	□□□□□ -1.74
TGA1	tA(UGC)A	YJL009W	P47078	108 aa		4.19	□□□□□ -1.74
TGA1	tA(UGC)A	YDR210W	Q03482	75 aa		4.19	□□□□□ -1.74
TGA1	tA(UGC)A	ATX1	P38636	73 aa		4.18	□□□□□ -1.74
TGA1	tA(UGC)A	EMC6	Q12431	108 aa		4.18	□□□□□ -1.74
TGA1	tA(UGC)A	YLR285C-A	Q3E771	56 aa		4.18	□□□□□ -1.74
TGA1	tA(UGC)A	INO4	P13902	151 aa		4.16	□□□□□ -1.74
TGA1	tA(UGC)A	YSY6	P38374	65 aa		4.16	□□□□□ -1.74
TGA1	tA(UGC)A	LIP1	Q03579	150 aa		4.16	□□□□□ -1.74
TGA1	tA(UGC)A	YOL013W-A	P0C272	63 aa	Predicted RBP	4.09	□□□□□ -1.75
TGA1	tA(UGC)A	YFL041W-A	Q3E817	63 aa		4.09	□□□□□ -1.75
TGA1	tA(UGC)A	YLR255C	O13574	117 aa		4.08	□□□□□ -1.76
TGA1	tA(UGC)A	YBR016W	P38216	128 aa		4.08	□□□□□ -1.76
TGA1	tA(UGC)A	YKL183C-A	Q3E765	70 aa		4.08	□□□□□ -1.76
TGA1	tA(UGC)A	YGR039W	P53225	103 aa		4.07	□□□□□ -1.76
TGA1	tA(UGC)A	YGL034C	P53186	121 aa		4.06	□□□□□ -1.76
TGA1	tA(UGC)A	HHF1	P02309	103 aa	Known RBP	4.04	□□□□□ -1.76
TGA1	tA(UGC)A	YGR146C-A	Q8TGT9	53 aa		4.04	□□□□□ -1.76
TGA1	tA(UGC)A	YBL008W-A	Q3E821	79 aa		4.03	□□□□□ -1.76
TGA1	tA(UGC)A	YOR314W	Q12506	109 aa		4.01	□□□□□ -1.77
TGA1	tA(UGC)A	COX8	P04039	78 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms